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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: High
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:715.1 nTPM
FANTOM5:771.2 Scaled Tags Per Million
Pig:272.2 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA041344Antibody HPA049132Antibody CAB000362Antibody CAB005419
Glial cells Not detectedHighNot detectedLow
Neuronal cells LowMediumNot detectedNot detected








CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 715.1
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 715.1
Samples: 246

Max nTPM: 2983.0
Min nTPM: 400.9
Std nTPM: 286.9
Median nTPM: 633.0
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 2983.0
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 2127.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 2077.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 1762.9
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 1613.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 1569.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 1346.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 1319.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 1265.6
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 1264.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 1239.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 1235.2
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 1215.0
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 1214.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 1208.2
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 1182.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 1177.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 1132.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 1105.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 1103.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 1082.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 1036.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 1032.3
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 971.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 962.2
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 958.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 949.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 929.1
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 928.1
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 910.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 906.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 901.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 883.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 881.0
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 873.9
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 871.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 868.5
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 866.0
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 860.1
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 858.1
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 854.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 850.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 849.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 844.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 841.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 841.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 838.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 835.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 834.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 830.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 823.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 821.8
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 818.6
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 818.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 797.7
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 792.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 792.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 791.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 782.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 775.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 773.1
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 771.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 769.6
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 765.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 762.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 762.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 760.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 756.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 754.1
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 753.9
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 749.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 742.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 735.7
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 734.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 734.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 732.7
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 732.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 731.2
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 726.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 725.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 722.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 717.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 717.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 717.1
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 714.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 708.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 706.8
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 705.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 705.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 704.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 697.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 696.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 696.3
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 692.5
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 692.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 688.6
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 687.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 687.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 683.2
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 681.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 680.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 679.8
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 673.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 672.1
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 671.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 671.5
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 670.8
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 670.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 670.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 668.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 663.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 660.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 657.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 655.3
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 655.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 652.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 651.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 644.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 644.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 639.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 638.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 635.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 633.1
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 632.9
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 632.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 631.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 629.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 627.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 626.8
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 626.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 625.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 622.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 622.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 621.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 621.5
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 620.9
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 618.0
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 616.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 615.6
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 613.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 613.3
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 613.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 613.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 612.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 611.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 610.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 609.9
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 608.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 606.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 603.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 603.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 600.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 599.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 598.4
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 598.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 597.7
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 596.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 595.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 593.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 592.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 591.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 588.7
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 584.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 584.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 583.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 582.9
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 582.4
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 582.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 581.5
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 580.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 580.2
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 580.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 572.4
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 570.0
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 569.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 567.6
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 566.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 565.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 564.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 564.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 562.7
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 561.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 558.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 555.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 554.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 553.2
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 552.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 551.1
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 548.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 547.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 547.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 544.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 543.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 541.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 536.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 536.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 535.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 535.7
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 533.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 528.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 527.6
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 527.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 524.8
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 523.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 523.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 522.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 522.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 521.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 519.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 519.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 517.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 516.7
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 516.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 515.9
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 514.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 510.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 510.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 507.6
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 505.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 503.5
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 502.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 502.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 500.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 499.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 490.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 490.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 486.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 485.1
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 481.6
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 481.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 480.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 480.8
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 480.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 479.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 477.2
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 465.5
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 453.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 450.6
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 447.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 441.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 440.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 437.6
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 437.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 435.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 419.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 400.9
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 771.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 771.2
FF:10164-103B2 76 years, female 771.2

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 272.2
Pig sample Sample description nTPM
Caudate
nTPM: 272.2
Samples: 4

Max nTPM: 328.5
Min nTPM: 231.2
Sample A Female 231.2
Sample B Female 276.1
Sample C Male 328.5
Sample D Male 253.1

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