HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:14.4 nTPM
HPA:14.4 nTPM
GTEx:12.2 nTPM
FANTOM5:19.7 Scaled Tags Per Million
Pig:14.0 nTPM
Mouse:44.3 nTPM
Allen mouse:2.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041012
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 14.4
Sample id Sample description nTPM
Hippocampus
nTPM: 12.7
2529 Female, age 94, left hemisphere 13.4
2148 Female, age 91, left hemisphere 13.2
1911 Female, age 85, right hemisphere 13.1
1898 Male, age 80, left hemisphere 12.7
2621 Female, age 67, right hemisphere 12.2
1855 Male, age 76, left hemisphere 11.7
Dentate gyrus
nTPM: 13.4
2531 Female, age 67, both hemispheres 14.4
2246 Female, age 85, both hemispheres 13.9
2528 Male, age 74, both hemispheres 13.8
2530 Female, age 94, left hemisphere 13.5
1927 Female, age 91, both hemispheres 12.7
2010 Male, age 76, both hemispheres 12.1
Entorhinal gyrus
nTPM: 14.2
2764 Male, age 80, right hemisphere 15.8
2686 Male, age 75, right hemisphere 14.4
2613 Female, age 94, left hemisphere 14.3
1938 Female, age 85, left hemisphere 14.2
2117 Female, age 91, right hemisphere 13.7
1787 Male, age 76, left hemisphere 13.0
Hippocampus, CA1
nTPM: 13.3
2749 Male, age 80, left hemisphere 15.1
2082 Female, age 91, right hemisphere 14.3
2527 Male, age 74, both hemispheres 13.5
1873 Female, age 85, both hemispheres 13.0
2045 Male, age 76, both hemispheres 10.9
Hippocampus, CA2
nTPM: 13.7
1940 Female, age 85, left hemisphere 14.4
2113 Female, age 91, right hemisphere 14.2
2249 Male, age 74, both hemispheres 14.1
1963 Male, age 80, left hemisphere 13.9
2437 Female, age 94, left hemisphere 13.5
1892 Male, age 76, both hemispheres 11.9
Hippocampus, CA3
nTPM: 13.9
2620 Female, age 94, left hemisphere 16.0
2137 Male, age 80, left hemisphere 15.2
2436 Male, age 74, both hemispheres 14.0
1891 Female, age 85, both hemispheres 13.9
2861 Female, age 67, both hemispheres 13.9
1867 Male, age 76, both hemispheres 10.6
Parahippocampal cortex
nTPM: 13.9
2532 Female, age 72, left hemisphere 15.4
1850 Male, age 80, both hemispheres 14.9
1990 Female, age 91, right hemisphere 14.2
2692 Male, age 74, both hemispheres 14.2
2622 Female, age 67, right hemisphere 14.1
2693 Female, age 94, both hemispheres 14.1
2250 Female, age 67, right hemisphere 13.8
1933 Female, age 85, both hemispheres 13.5
2245 Female, age 91, both hemispheres 12.9
2018 Male, age 76, both hemispheres 11.8
Perirhinal gyrus
nTPM: 14.4
2521 Female, age 94, right hemisphere 16.2
1794 Male, age 80, right hemisphere 14.8
1841 Female, age 85, right hemisphere 14.2
2848 Male, age 76, right hemisphere 13.4
1847 Female, age 91, left hemisphere 13.2
Subiculum
nTPM: 13.5
1977 Female, age 85, both hemispheres 14.2
2042 Male, age 76, both hemispheres 13.8
1901 Male, age 80, both hemispheres 13.7
2438 Female, age 94, left hemisphere 13.2
2619 Male, age 74, both hemispheres 12.9
2729 Female, age 91, right hemisphere 12.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 12.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.2
Samples: 197

Max nTPM: 27.5
Min nTPM: 6.4
Std nTPM: 2.3
Median nTPM: 11.7
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 27.5
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 20.8
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 20.5
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 17.8
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 17.3
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 17.3
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 17.0
GTEX-13S7M-0011-R1b-SM-5PNZE 60-69 years, female 16.3
GTEX-1EH9U-0011-R1b-SM-CJI2B 60-69 years, male 16.3
GTEX-XMD1-0011-R1A-SM-4AT4C 60-69 years, male 16.1
GTEX-132Q8-0011-R1a-SM-5EGLK 60-69 years, male 16.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 19.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 19.7
FF:10153-102I9 76 years, female 20.6
FF:10169-103B7 60 years, female 18.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 14.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 13.9
Samples: 4

Max nTPM: 15.9
Min nTPM: 11.8
Sample A Female 15.9
Sample B Female 15.0
Sample C Male 12.9
Sample D Male 11.8
Entorhinal cortex
nTPM: 14.0
Samples: 4

Max nTPM: 14.9
Min nTPM: 12.8
Sample A Female 14.9
Sample B Female 14.4
Sample C Male 13.9
Sample D Male 12.8
Subiculum
nTPM: 13.8
Samples: 4

Max nTPM: 16.4
Min nTPM: 12.3
Sample A Female 16.4
Sample B Female 13.2
Sample C Male 13.3
Sample D Male 12.3
Ventral hippocampus
nTPM: 13.4
Samples: 4

Max nTPM: 15.5
Min nTPM: 10.8
Sample A Female 13.1
Sample B Female 10.8
Sample C Male 15.5
Sample D Male 14.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 44.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 44.3
Samples: 4

Max nTPM: 52.2
Min nTPM: 39.4
Sample A Male 43.7
Sample B Male 42.0
Sample C Female 39.4
Sample D Female 52.2
Hippocampal formation
nTPM: 37.3
Samples: 4

Max nTPM: 38.2
Min nTPM: 36.8
Sample A Male 37.2
Sample B Male 36.8
Sample C Female 36.8
Sample D Female 38.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.8
67815937 Antisense, RP_040920_02_B01, Mouse strain C57BL/6J (56 days, male) 2.8

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The Human Protein Atlas

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