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NDUFC2
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BRAIN PONS Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS
MEDULLA OBLONGATA MIDBRAIN PONS SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Pons
PONS - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:124.2 nTPM
HPA:124.2 nTPM
FANTOM5:198.0 Scaled Tags Per Million

PONS - HPA Brain RNA-seq
Max nTPM 124.2
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 108.8
2301 Female, age 85, both hemispheres 110.7
1984 Male, age 76, both hemispheres 109.4
2188 Female, age 91, both hemispheres 108.1
2090 Male, age 80, both hemispheres 106.8
Dorsal cochlear nucleus
nTPM: 105.0
2187 Female, age 91, both hemispheres 111.9
2370 Male, age 61, both hemispheres 109.4
2802 Male, age 74, right hemisphere 104.2
2058 Male, age 76, both hemispheres 101.9
2378 Male, age 80, both hemispheres 97.8
Dorsal tegmental nucleus
nTPM: 108.8
2083 Male, age 80, both hemispheres 112.4
2326 Male, age 74, both hemispheres 112.3
2358 Male, age 61, both hemispheres 108.0
1936 Male, age 76, left hemisphere 102.4
Dorsolateral tegmental area
nTPM: 113.0
2751 Female, age 85, both hemispheres 121.6
2654 Male, age 80, both hemispheres 119.4
2360 Male, age 74, both hemispheres 113.0
2337 Male, age 61, both hemispheres 105.7
2141 Male, age 76, both hemispheres 105.3
Kolliker-Fuse nucleus
nTPM: 112.0
2163 Male, age 80, both hemispheres 128.0
2793 Female, age 91, left hemisphere 104.6
2315 Male, age 76, right hemisphere 103.3
Lateral lemniscal nuclei
nTPM: 111.9
2169 Male, age 76, both hemispheres 122.9
2036 Male, age 80, both hemispheres 121.9
2746 Female, age 85, left hemisphere 116.7
2453 Male, age 74, right hemisphere 100.0
2320 Female, age 91, left hemisphere 97.8
Lateral parabrachial nucleus
nTPM: 108.9
2139 Female, age 85, right hemisphere 118.2
2013 Male, age 80, both hemispheres 115.1
2790 Male, age 61, both hemispheres 102.6
2792 Male, age 76, both hemispheres 99.8
Lateral vestibular nucleus
nTPM: 116.7
2184 Male, age 76, both hemispheres 123.0
2311 Male, age 80, both hemispheres 110.5
Locus coeruleus
nTPM: 119.7
2123 Female, age 91, both hemispheres 133.2
2014 Male, age 55, unknown 132.4
1980 Male, age 76, both hemispheres 127.4
2317 Female, age 72, unknown 116.5
2162 Male, age 80, both hemispheres 112.1
2720 Male, age 74, both hemispheres 109.3
2788 Male, age 74, unknown 106.9
Medial olivary nucleus
nTPM: 114.4
1943 Male, age 61, both hemispheres 123.8
2138 Female, age 91, both hemispheres 121.1
1962 Male, age 76, both hemispheres 110.5
2851 Male, age 80, both hemispheres 102.0
Medial parabrachial nucleus
nTPM: 115.5
2170 Female, age 91, both hemispheres 125.4
2463 Female, age 85, right hemisphere 117.8
2854 Male, age 80, both hemispheres 113.1
2156 Male, age 61, both hemispheres 112.5
2786 Male, age 76, both hemispheres 108.9
Medial periolivary nuclei
nTPM: 112.3
2171 Female, age 85, both hemispheres 124.8
2791 Male, age 74, right hemisphere 123.4
2063 Male, age 76, both hemispheres 119.5
2081 Male, age 80, both hemispheres 97.8
2458 Female, age 91, both hemispheres 96.1
Motor facial nucleus
nTPM: 108.8
2062 Male, age 76, both hemispheres 127.8
2365 Male, age 74, right hemisphere 119.7
2126 Male, age 61, both hemispheres 105.3
2697 Female, age 85, both hemispheres 101.4
2327 Male, age 80, both hemispheres 101.0
2795 Female, age 91, both hemispheres 97.7
Motor trigeminal nucleus
nTPM: 104.4
2335 Male, age 61, both hemispheres 108.2
2560 Male, age 74, both hemispheres 107.5
2309 Male, age 76, both hemispheres 105.3
2079 Male, age 80, both hemispheres 104.3
2321 Female, age 91, both hemispheres 96.6
Nuclei of the trapezoid body
nTPM: 117.9
2159 Male, age 61, both hemispheres 130.5
1983 Male, age 76, both hemispheres 126.3
2735 Female, age 85, both hemispheres 124.6
2166 Male, age 80, both hemispheres 109.9
2368 Female, age 91, both hemispheres 98.4
Paramedian reticular nucleus
nTPM: 116.0
2050 Female, age 85, both hemispheres 125.5
2057 Male, age 80, both hemispheres 121.4
2313 Male, age 61, both hemispheres 114.9
2052 Male, age 76, both hemispheres 102.1
Pontine nuclei
nTPM: 122.1
1863 Male, age 55, unknown 137.1
2727 Male, age 61, right hemisphere 134.5
1968 Male, age 76, left hemisphere 126.5
2454 Male, age 74, left hemisphere 126.1
2787 Female, age 85, both hemispheres 126.1
2109 Female, age 72, unknown 120.5
2319 Female, age 91, both hemispheres 105.8
2115 Male, age 80, left hemisphere 100.4
Pontine raphe nucleus
nTPM: 115.0
2122 Female, age 85, midline 120.8
2853 Male, age 76, midline 109.1
Posteroventral cochlear nucleus
nTPM: 109.2
2752 Female, age 85, both hemispheres 119.4
2070 Male, age 76, both hemispheres 110.9
2371 Male, age 61, both hemispheres 108.0
2341 Male, age 80, both hemispheres 107.3
2135 Female, age 91, both hemispheres 100.2
Principal sensory trigeminal nucleus
nTPM: 114.5
2158 Male, age 61, both hemispheres 126.8
2008 Male, age 80, left hemisphere 115.7
2324 Male, age 76, both hemispheres 113.4
2367 Female, age 91, left hemisphere 102.2
Reticular pontine nucleus, caudal
nTPM: 106.4
2092 Male, age 76, both hemispheres 118.2
2559 Male, age 74, both hemispheres 109.6
2332 Male, age 80, right hemisphere 102.5
2457 Female, age 91, both hemispheres 95.4
Reticular pontine nucleus, oral
nTPM: 124.2
2361 Male, age 74, both hemispheres 143.3
1939 Male, age 80, both hemispheres 129.4
2012 Female, age 85, both hemispheres 123.1
2167 Male, age 76, both hemispheres 119.0
2366 Female, age 91, both hemispheres 106.4
Reticulotegmental nucleus
nTPM: 107.0
2325 Male, age 76, both hemispheres 109.6
2452 Male, age 74, both hemispheres 109.3
2322 Female, age 91, both hemispheres 104.6
2333 Male, age 80, both hemispheres 104.3
Spinal trigeminal nucleus, oral
nTPM: 115.0
2737 Female, age 85, both hemispheres 119.0
1978 Male, age 76, both hemispheres 114.6
2164 Male, age 80, both hemispheres 111.5
Subcoeruleus area
nTPM: 114.5
2323 Female, age 91, left hemisphere 121.6
1958 Male, age 80, both hemispheres 121.5
2369 Female, age 85, left hemisphere 115.7
2451 Male, age 74, both hemispheres 108.6
2089 Male, age 76, left hemisphere 105.0
Superior olive
nTPM: 114.0
2364 Male, age 74, right hemisphere 125.4
1875 Female, age 85, both hemispheres 124.7
2020 Male, age 76, both hemispheres 118.6
2329 Male, age 80, right hemisphere 103.9
2561 Female, age 91, both hemispheres 97.3
Superior vestibular nucleus
nTPM: 119.3
2383 Male, age 74, both hemispheres 138.6
2015 Male, age 80, both hemispheres 117.6
2061 Male, age 76, both hemispheres 101.6
Ventral periolivary nuclei
nTPM: 113.2
2023 Male, age 76, both hemispheres 121.4
2130 Female, age 85, both hemispheres 119.9
2165 Male, age 80, both hemispheres 119.4
2794 Female, age 91, left hemisphere 92.1
Ventrolateral tegmental area, A5 NE cell group
nTPM: 110.8
1959 Male, age 76, both hemispheres 121.6
2840 Female, age 85, both hemispheres 114.3
2359 Male, age 61, both hemispheres 112.9
2449 Male, age 74, both hemispheres 111.2
2161 Male, age 80, both hemispheres 105.8
2456 Female, age 91, both hemispheres 98.8

PONS - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 198.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 165.9
FF:10182-103D2 60 years, female 177.4
FF:10165-103B3 76 years, female 154.4
Pons
Scaled Tags Per Million: 198.0
FF:10033-101E6 18-54 years, mixed 198.0

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The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.