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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:201.7 nTPM
FANTOM5:72.3 Scaled Tags Per Million
Pig:35.1 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA052623
Glial cells Low
Neuronal cells Medium



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 201.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 201.7
Samples: 246

Max nTPM: 509.2
Min nTPM: 68.8
Std nTPM: 64.4
Median nTPM: 191.3
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 509.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 478.1
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 458.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 402.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 392.8
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 387.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 373.9
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 358.0
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 353.7
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 351.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 344.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 319.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 317.3
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 305.9
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 299.6
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 298.1
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 296.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 295.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 293.8
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 292.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 292.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 289.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 288.0
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 285.7
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 283.1
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 275.1
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 274.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 273.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 270.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 267.2
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 265.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 264.5
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 263.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 259.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 256.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 252.6
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 251.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 250.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 250.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 249.9
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 249.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 247.8
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 247.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 243.0
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 242.9
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 242.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 240.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 237.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 236.9
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 235.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 234.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 233.5
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 233.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 233.2
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 233.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 231.6
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 230.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 230.2
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 230.1
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 229.8
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 229.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 227.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 226.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 225.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 223.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 222.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 221.5
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 221.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 219.8
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 218.7
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 217.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 217.7
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 217.5
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 217.2
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 216.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 215.9
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 215.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 215.6
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 215.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 214.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 214.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 211.9
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 209.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 209.9
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 209.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 209.4
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 209.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 208.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 208.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 208.2
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 207.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 207.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 206.5
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 206.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 206.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 206.4
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 205.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 204.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 204.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 204.1
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 203.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 203.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 203.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 203.0
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 201.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 201.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 201.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 200.9
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 200.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 199.4
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 197.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 196.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 196.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 196.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 196.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 195.7
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 195.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 194.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 194.6
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 194.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 193.2
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 192.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 191.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 191.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 190.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 190.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 189.9
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 188.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 187.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 187.6
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 187.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 187.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 186.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 186.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 186.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 185.7
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 185.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 185.0
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 184.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 183.9
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 183.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 182.8
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 182.4
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 182.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 181.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 180.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 180.1
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 179.7
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 179.0
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 178.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 178.0
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 177.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 176.6
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 176.4
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 176.3
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 176.1
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 175.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 175.6
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 175.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 174.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 174.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 174.4
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 173.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 173.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 173.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 172.5
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 172.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 170.3
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 169.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 169.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 168.2
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 168.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 167.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 167.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 167.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 165.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 165.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 164.1
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 163.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 163.5
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 163.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 162.1
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 161.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 161.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 161.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 161.1
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 160.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 160.5
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 160.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 160.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 159.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 158.1
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 158.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 158.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 157.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 156.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 156.0
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 155.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 155.2
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 155.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 154.6
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 153.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 153.9
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 152.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 152.4
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 152.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 151.9
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 151.7
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 150.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 149.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 148.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 147.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 146.7
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 146.7
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 146.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 144.1
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 143.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 143.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 142.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 139.8
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 137.8
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 137.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 137.2
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 135.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 129.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 126.0
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 125.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 123.2
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 122.8
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 122.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 122.1
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 122.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 120.0
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 116.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 116.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 116.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 116.1
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 115.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 114.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 105.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 103.7
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 95.4
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 90.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 78.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 75.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 68.8
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 72.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 72.3
FF:10164-103B2 76 years, female 72.3

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 35.1
Pig sample Sample description nTPM
Caudate
nTPM: 35.2
Samples: 4

Max nTPM: 40.3
Min nTPM: 29.9
Sample A Female 30.8
Sample B Female 39.6
Sample C Male 40.3
Sample D Male 29.9

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