HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:12.9 nTPM
HPA:12.9 nTPM
GTEx:13.8 nTPM
FANTOM5:13.6 Scaled Tags Per Million
Pig:8.5 nTPM
Mouse:10.3 nTPM
Allen mouse:1.7 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA007224
Glial cells Not detected
Neuronal cells Medium


HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 12.9
Sample id Sample description nTPM
Hippocampus
nTPM: 10.5
1898 Male, age 80, left hemisphere 12.2
2148 Female, age 91, left hemisphere 12.1
2621 Female, age 67, right hemisphere 10.7
1911 Female, age 85, right hemisphere 9.8
1855 Male, age 76, left hemisphere 9.2
2529 Female, age 94, left hemisphere 9.1
Dentate gyrus
nTPM: 10.2
1927 Female, age 91, both hemispheres 15.6
2531 Female, age 67, both hemispheres 10.8
2530 Female, age 94, left hemisphere 8.9
2246 Female, age 85, both hemispheres 8.6
2010 Male, age 76, both hemispheres 8.5
2528 Male, age 74, both hemispheres 8.5
Entorhinal gyrus
nTPM: 12.9
2613 Female, age 94, left hemisphere 18.6
1938 Female, age 85, left hemisphere 15.7
2764 Male, age 80, right hemisphere 12.6
1787 Male, age 76, left hemisphere 12.5
2686 Male, age 75, right hemisphere 9.4
2117 Female, age 91, right hemisphere 8.5
Hippocampus, CA1
nTPM: 10.8
2749 Male, age 80, left hemisphere 14.9
2527 Male, age 74, both hemispheres 11.4
1873 Female, age 85, both hemispheres 9.6
2045 Male, age 76, both hemispheres 8.9
2082 Female, age 91, right hemisphere 8.9
Hippocampus, CA2
nTPM: 11.3
2249 Male, age 74, both hemispheres 14.5
1892 Male, age 76, both hemispheres 14.1
2437 Female, age 94, left hemisphere 12.6
2113 Female, age 91, right hemisphere 9.2
1940 Female, age 85, left hemisphere 9.0
1963 Male, age 80, left hemisphere 8.1
Hippocampus, CA3
nTPM: 11.1
2137 Male, age 80, left hemisphere 13.8
1867 Male, age 76, both hemispheres 11.7
2436 Male, age 74, both hemispheres 10.6
1891 Female, age 85, both hemispheres 10.5
2861 Female, age 67, both hemispheres 10.4
2620 Female, age 94, left hemisphere 9.5
Parahippocampal cortex
nTPM: 11.0
1990 Female, age 91, right hemisphere 14.5
2250 Female, age 67, right hemisphere 12.8
1933 Female, age 85, both hemispheres 12.3
1850 Male, age 80, both hemispheres 11.3
2245 Female, age 91, both hemispheres 10.8
2692 Male, age 74, both hemispheres 10.5
2693 Female, age 94, both hemispheres 10.1
2622 Female, age 67, right hemisphere 9.5
2532 Female, age 72, left hemisphere 9.3
2018 Male, age 76, both hemispheres 9.0
Perirhinal gyrus
nTPM: 12.3
1847 Female, age 91, left hemisphere 19.6
2521 Female, age 94, right hemisphere 12.1
1794 Male, age 80, right hemisphere 10.8
1841 Female, age 85, right hemisphere 9.9
2848 Male, age 76, right hemisphere 9.1
Subiculum
nTPM: 11.2
1977 Female, age 85, both hemispheres 13.1
2619 Male, age 74, both hemispheres 12.8
1901 Male, age 80, both hemispheres 12.2
2438 Female, age 94, left hemisphere 10.8
2729 Female, age 91, right hemisphere 9.8
2042 Male, age 76, both hemispheres 8.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.8
Samples: 197

Max nTPM: 43.1
Min nTPM: 1.0
Std nTPM: 5.7
Median nTPM: 12.8
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 43.1
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 32.9
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 32.0
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 31.3
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 25.7
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 25.4
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 25.3
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 24.6
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 24.3
GTEX-ZDXO-0011-R1a-SM-4WKF4 60-69 years, male 22.6
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 22.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 13.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 13.6
FF:10169-103B7 60 years, female 15.6
FF:10153-102I9 76 years, female 11.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 8.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 2.6
Samples: 4

Max nTPM: 4.1
Min nTPM: 1.5
Sample A Female 3.1
Sample B Female 1.8
Sample C Male 4.1
Sample D Male 1.5
Entorhinal cortex
nTPM: 4.8
Samples: 4

Max nTPM: 5.3
Min nTPM: 4.1
Sample A Female 5.1
Sample B Female 4.1
Sample C Male 5.3
Sample D Male 4.6
Subiculum
nTPM: 8.5
Samples: 4

Max nTPM: 11.5
Min nTPM: 6.2
Sample A Female 11.5
Sample B Female 8.0
Sample C Male 8.1
Sample D Male 6.2
Ventral hippocampus
nTPM: 3.1
Samples: 4

Max nTPM: 4.8
Min nTPM: 2.2
Sample A Female 2.2
Sample B Female 2.9
Sample C Male 4.8
Sample D Male 2.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 10.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 10.4
Samples: 4

Max nTPM: 11.3
Min nTPM: 9.7
Sample A Male 9.7
Sample B Male 10.6
Sample C Female 9.8
Sample D Female 11.3
Hippocampal formation
nTPM: 8.6
Samples: 4

Max nTPM: 10.7
Min nTPM: 6.3
Sample A Male 8.8
Sample B Male 6.3
Sample C Female 10.7
Sample D Female 8.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.7
70203525 Antisense, RP_050519_01_F05, Mouse strain C57BL/6J (56 days, male) 1.7
71670711 Antisense, RP_050519_01_F05, Mouse strain C57BL/6J (56 days, male) 0.8

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The Human Protein Atlas

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