HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:71.7 nTPM
HPA:71.7 nTPM
GTEx:76.2 nTPM
FANTOM5:43.0 Scaled Tags Per Million
Pig:58.6 nTPM
Mouse:73.5 nTPM
Allen mouse:9.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA052128
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 71.7
Sample id Sample description nTPM
Hippocampus
nTPM: 67.0
1911 Female, age 85, right hemisphere 71.5
2621 Female, age 67, right hemisphere 71.2
2148 Female, age 91, left hemisphere 69.6
1898 Male, age 80, left hemisphere 67.6
1855 Male, age 76, left hemisphere 66.8
2529 Female, age 94, left hemisphere 55.2
Dentate gyrus
nTPM: 68.6
1927 Female, age 91, both hemispheres 79.4
2531 Female, age 67, both hemispheres 71.8
2246 Female, age 85, both hemispheres 68.7
2010 Male, age 76, both hemispheres 68.4
2530 Female, age 94, left hemisphere 65.8
2528 Male, age 74, both hemispheres 57.3
Entorhinal gyrus
nTPM: 69.1
2613 Female, age 94, left hemisphere 91.0
1787 Male, age 76, left hemisphere 69.5
1938 Female, age 85, left hemisphere 68.5
2764 Male, age 80, right hemisphere 68.4
2686 Male, age 75, right hemisphere 62.3
2117 Female, age 91, right hemisphere 54.7
Hippocampus, CA1
nTPM: 70.9
2749 Male, age 80, left hemisphere 95.1
1873 Female, age 85, both hemispheres 76.0
2045 Male, age 76, both hemispheres 66.3
2527 Male, age 74, both hemispheres 62.6
2082 Female, age 91, right hemisphere 54.6
Hippocampus, CA2
nTPM: 69.3
1892 Male, age 76, both hemispheres 89.5
1963 Male, age 80, left hemisphere 76.6
1940 Female, age 85, left hemisphere 68.4
2437 Female, age 94, left hemisphere 62.3
2113 Female, age 91, right hemisphere 59.8
2249 Male, age 74, both hemispheres 59.2
Hippocampus, CA3
nTPM: 71.7
2137 Male, age 80, left hemisphere 85.0
2620 Female, age 94, left hemisphere 77.9
1867 Male, age 76, both hemispheres 77.5
2861 Female, age 67, both hemispheres 69.5
1891 Female, age 85, both hemispheres 65.6
2436 Male, age 74, both hemispheres 54.8
Parahippocampal cortex
nTPM: 66.8
2622 Female, age 67, right hemisphere 76.2
1990 Female, age 91, right hemisphere 73.0
2245 Female, age 91, both hemispheres 72.7
2532 Female, age 72, left hemisphere 69.8
1850 Male, age 80, both hemispheres 68.1
1933 Female, age 85, both hemispheres 65.1
2693 Female, age 94, both hemispheres 64.8
2250 Female, age 67, right hemisphere 61.1
2018 Male, age 76, both hemispheres 59.5
2692 Male, age 74, both hemispheres 57.1
Perirhinal gyrus
nTPM: 69.8
1847 Female, age 91, left hemisphere 75.7
2848 Male, age 76, right hemisphere 72.3
1841 Female, age 85, right hemisphere 67.3
1794 Male, age 80, right hemisphere 67.0
2521 Female, age 94, right hemisphere 66.6
Subiculum
nTPM: 62.2
1901 Male, age 80, both hemispheres 68.3
1977 Female, age 85, both hemispheres 68.3
2042 Male, age 76, both hemispheres 62.5
2438 Female, age 94, left hemisphere 59.2
2729 Female, age 91, right hemisphere 58.4
2619 Male, age 74, both hemispheres 56.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 76.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 76.2
Samples: 197

Max nTPM: 172.7
Min nTPM: 8.4
Std nTPM: 36.7
Median nTPM: 75.9
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 172.7
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 163.7
GTEX-14BIM-0011-R1a-SM-69LQI 60-69 years, female 161.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 156.3
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 152.5
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 146.4
GTEX-12WSE-0011-R1b-SM-5GU4V 20-29 years, male 144.5
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 141.1
GTEX-14E6D-0011-R1b-SM-5YYAW 50-59 years, male 138.3
GTEX-11GS4-0011-R1a-SM-DO129 60-69 years, male 137.5
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 137.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 43.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 43.0
FF:10169-103B7 60 years, female 50.2
FF:10153-102I9 76 years, female 35.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 58.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 58.6
Samples: 4

Max nTPM: 77.6
Min nTPM: 43.7
Sample A Female 77.6
Sample B Female 62.2
Sample C Male 51.0
Sample D Male 43.7
Entorhinal cortex
nTPM: 38.9
Samples: 4

Max nTPM: 43.7
Min nTPM: 33.9
Sample A Female 43.7
Sample B Female 40.0
Sample C Male 37.9
Sample D Male 33.9
Subiculum
nTPM: 29.9
Samples: 4

Max nTPM: 45.1
Min nTPM: 23.3
Sample A Female 45.1
Sample B Female 26.4
Sample C Male 23.3
Sample D Male 24.7
Ventral hippocampus
nTPM: 40.0
Samples: 4

Max nTPM: 61.3
Min nTPM: 24.1
Sample A Female 41.9
Sample B Female 24.1
Sample C Male 32.6
Sample D Male 61.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 73.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 71.9
Samples: 4

Max nTPM: 75.7
Min nTPM: 66.1
Sample A Male 70.8
Sample B Male 75.0
Sample C Female 66.1
Sample D Female 75.7
Hippocampal formation
nTPM: 73.5
Samples: 4

Max nTPM: 89.6
Min nTPM: 64.4
Sample A Male 64.4
Sample B Male 75.5
Sample C Female 89.6
Sample D Female 64.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.1
69407272 Antisense, RP_050414_01_C08, Mouse strain C57BL/6J (56 days, male) 12.4
73992709 Antisense, RP_051214_01_E03, Mouse strain C57BL/6J (56 days, male) 5.8

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The Human Protein Atlas

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