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ATP5F1A
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  • ATP5F1A
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: High
Neuronal cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:312.0 nTPM
FANTOM5:216.3 Scaled Tags Per Million
Pig:100.5 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA040622Antibody HPA044202Antibody CAB013067
Glial cells LowHighHigh
Neuronal cells HighHighHigh







CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 312.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 312.0
Samples: 246

Max nTPM: 601.6
Min nTPM: 163.9
Std nTPM: 66.3
Median nTPM: 309.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 601.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 520.5
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 482.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 475.2
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 463.4
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 463.0
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 462.4
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 460.9
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 458.8
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 458.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 451.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 445.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 433.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 420.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 418.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 413.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 413.0
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 406.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 406.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 403.8
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 402.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 402.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 399.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 398.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 397.7
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 393.9
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 393.6
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 392.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 390.3
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 389.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 389.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 388.0
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 382.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 380.4
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 380.1
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 373.3
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 372.5
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 371.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 369.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 368.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 368.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 367.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 365.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 362.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 361.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 359.9
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 359.6
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 359.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 358.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 357.1
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 355.6
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 355.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 354.5
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 354.0
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 353.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 353.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 353.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 353.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 352.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 348.4
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 348.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 348.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 346.5
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 342.9
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 342.4
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 342.0
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 341.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 341.8
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 341.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 340.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 340.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 339.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 336.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 336.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 336.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 335.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 335.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 334.9
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 334.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 334.4
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 334.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 333.6
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 333.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 332.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 332.0
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 331.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 331.5
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 331.3
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 331.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 329.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 329.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 329.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 329.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 329.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 328.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 327.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 327.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 326.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 325.6
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 325.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 324.8
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 323.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 321.4
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 321.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 320.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 320.5
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 320.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 319.8
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 319.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 317.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 317.0
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 315.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 315.3
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 314.8
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 313.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 313.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 312.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 312.7
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 312.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 310.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 310.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 310.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 309.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 309.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 307.7
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 307.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 306.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 306.5
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 305.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 305.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 305.6
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 305.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 304.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 304.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 303.5
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 302.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 301.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 301.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 300.3
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 299.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 299.3
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 297.7
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 297.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 296.9
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 296.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 295.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 294.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 292.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 292.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 291.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 291.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 289.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 289.3
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 288.2
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 286.4
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 285.8
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 284.6
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 284.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 283.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 283.7
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 283.3
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 282.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 281.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 281.6
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 277.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 276.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 276.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 276.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 276.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 276.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 275.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 275.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 275.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 275.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 273.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 273.7
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 273.5
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 273.0
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 272.9
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 272.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 271.5
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 270.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 266.7
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 265.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 264.9
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 264.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 262.7
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 262.2
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 262.2
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 262.1
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 261.8
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 261.5
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 260.5
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 258.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 258.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 257.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 256.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 256.4
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 254.7
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 253.6
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 253.2
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 253.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 252.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 252.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 252.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 251.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 251.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 250.9
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 250.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 250.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 250.4
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 248.7
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 247.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 246.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 246.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 244.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 243.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 243.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 237.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 235.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 235.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 232.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 232.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 231.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 228.9
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 228.8
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 228.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 226.9
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 225.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 221.5
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 220.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 220.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 217.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 215.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 214.0
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 211.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 202.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 197.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 197.1
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 189.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 189.4
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 174.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 170.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 168.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 165.0
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 163.9
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 216.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 216.3
FF:10164-103B2 76 years, female 216.3

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 100.5
Pig sample Sample description nTPM
Caudate
nTPM: 100.5
Samples: 4

Max nTPM: 117.5
Min nTPM: 84.7
Sample A Female 96.2
Sample B Female 103.6
Sample C Male 117.5
Sample D Male 84.7

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