COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Low
Glandular cells: High
Peripheral nerve/ganglion: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:85.8 nTPM
HPA:85.8 nTPM
GTEx:61.9 nTPM
FANTOM5:277.1 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA012609Antibody HPA012723Antibody CAB011489
Endothelial cells Not detectedMediumLow
Glandular cells HighHighHigh
Peripheral nerve/ganglion LowMediumNot detected





COLON - HPA RNA-seqi
Average nTPM 85.8
overview
Male, age 54 		Colon sample 67
nTPM: 91.9
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 76.5
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 80.4
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 94.2
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 78
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 54
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 119.6
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 98.1
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 71.9
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 80.3
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 99.8
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 88.8
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 82.3
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 61.9
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 50.7
Samples: 373

Max nTPM: 98.3
Min nTPM: 28.6
Std nTPM: 10.1
Median nTPM: 50.4
GTEX-ZQUD-1026-SM-4YCEZ 30-39 years, male 98.3
GTEX-13113-1426-SM-5EGHU 60-69 years, female 85.2
GTEX-WH7G-1426-SM-4LVMU 40-49 years, male 81.5
GTEX-Y5V6-1626-SM-4VDT2 60-69 years, male 78.4
GTEX-WOFM-1926-SM-4OOSP 20-29 years, male 77.5
GTEX-1AMEY-1826-SM-72D5L 30-39 years, female 77.1
GTEX-W5WG-2026-SM-4LMIB 50-59 years, female 72.5
GTEX-X5EB-1126-SM-46MVV 40-49 years, male 72.3
GTEX-1H1E6-1826-SM-A9G21 30-39 years, male 72.1
GTEX-14E6E-1726-SM-5S2R6 30-39 years, male 70.7
GTEX-ZXES-1726-SM-5E43G 30-39 years, female 70.5
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Colon - Transverse
Average nTPM: 61.9
Samples: 406

Max nTPM: 128.5
Min nTPM: 26.0
Std nTPM: 16.7
Median nTPM: 58.5
GTEX-14E6E-1526-SM-5RQIG 30-39 years, male 128.5
GTEX-1122O-1526-SM-5N9CL 60-69 years, female 125.0
GTEX-ZVT2-1926-SM-5GU5T 50-59 years, female 113.5
GTEX-1LG7Z-1426-SM-CXKYV 30-39 years, male 111.2
GTEX-15RIF-1326-SM-6LPKO 20-29 years, male 108.9
GTEX-117YW-1826-SM-5PNY5 50-59 years, male 105.2
GTEX-1H1E6-1926-SM-9OSWD 30-39 years, male 103.5
GTEX-1B8KE-1926-SM-731EE 50-59 years, male 103.4
GTEX-14XAO-2026-SM-69LOI 60-69 years, female 103.2
GTEX-1AMFI-1726-SM-7189L 50-59 years, female 103.2
GTEX-R55G-1226-SM-48FDC 40-49 years, female 101.6
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 277.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 277.1
FF:10014-101C5 62,83,84 years, mixed 277.1

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.