HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:26.0 nTPM
HPA:26.0 nTPM
GTEx:19.4 nTPM
FANTOM5:107.8 Scaled Tags Per Million
Pig:59.5 nTPM
Mouse:86.9 nTPM
Allen mouse:17.3 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 26.0
Sample id Sample description nTPM
Hippocampus
nTPM: 20.0
1898 Male, age 80, left hemisphere 35.9
1855 Male, age 76, left hemisphere 23.1
2621 Female, age 67, right hemisphere 18.6
1911 Female, age 85, right hemisphere 14.5
2148 Female, age 91, left hemisphere 14.5
2529 Female, age 94, left hemisphere 13.4
Dentate gyrus
nTPM: 19.9
1927 Female, age 91, both hemispheres 28.4
2010 Male, age 76, both hemispheres 26.8
2530 Female, age 94, left hemisphere 20.9
2528 Male, age 74, both hemispheres 17.8
2246 Female, age 85, both hemispheres 16.9
2531 Female, age 67, both hemispheres 8.6
Entorhinal gyrus
nTPM: 17.5
1938 Female, age 85, left hemisphere 25.1
2764 Male, age 80, right hemisphere 21.9
1787 Male, age 76, left hemisphere 16.2
2613 Female, age 94, left hemisphere 16.0
2117 Female, age 91, right hemisphere 14.4
2686 Male, age 75, right hemisphere 11.5
Hippocampus, CA1
nTPM: 26.0
2749 Male, age 80, left hemisphere 54.4
1873 Female, age 85, both hemispheres 29.9
2527 Male, age 74, both hemispheres 18.8
2082 Female, age 91, right hemisphere 14.9
2045 Male, age 76, both hemispheres 11.8
Hippocampus, CA2
nTPM: 24.4
1963 Male, age 80, left hemisphere 44.9
1892 Male, age 76, both hemispheres 36.0
2249 Male, age 74, both hemispheres 19.5
1940 Female, age 85, left hemisphere 16.6
2113 Female, age 91, right hemisphere 15.2
2437 Female, age 94, left hemisphere 14.3
Hippocampus, CA3
nTPM: 21.1
2137 Male, age 80, left hemisphere 37.1
1867 Male, age 76, both hemispheres 28.6
2436 Male, age 74, both hemispheres 18.8
1891 Female, age 85, both hemispheres 16.7
2861 Female, age 67, both hemispheres 13.6
2620 Female, age 94, left hemisphere 11.6
Parahippocampal cortex
nTPM: 17.5
1850 Male, age 80, both hemispheres 29.7
1990 Female, age 91, right hemisphere 21.3
1933 Female, age 85, both hemispheres 21.2
2245 Female, age 91, both hemispheres 17.8
2250 Female, age 67, right hemisphere 16.9
2693 Female, age 94, both hemispheres 16.3
2532 Female, age 72, left hemisphere 14.8
2692 Male, age 74, both hemispheres 14.8
2018 Male, age 76, both hemispheres 13.0
2622 Female, age 67, right hemisphere 9.1
Perirhinal gyrus
nTPM: 23.0
1847 Female, age 91, left hemisphere 30.7
1794 Male, age 80, right hemisphere 22.3
1841 Female, age 85, right hemisphere 22.1
2848 Male, age 76, right hemisphere 20.0
2521 Female, age 94, right hemisphere 19.9
Subiculum
nTPM: 15.9
1901 Male, age 80, both hemispheres 24.2
1977 Female, age 85, both hemispheres 19.3
2042 Male, age 76, both hemispheres 14.4
2438 Female, age 94, left hemisphere 13.0
2729 Female, age 91, right hemisphere 12.5
2619 Male, age 74, both hemispheres 12.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 19.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 19.4
Samples: 197

Max nTPM: 66.9
Min nTPM: 8.3
Std nTPM: 8.6
Median nTPM: 16.8
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 66.9
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 48.3
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 43.4
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 42.8
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 42.2
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 41.7
GTEX-14JIY-0011-R1a-SM-68713 60-69 years, male 41.4
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 37.8
GTEX-14ASI-0011-R1b-SM-5S2TY 60-69 years, male 36.3
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 36.2
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 36.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 107.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 107.8
FF:10169-103B7 60 years, female 145.4
FF:10153-102I9 76 years, female 70.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 59.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 59.5
Samples: 4

Max nTPM: 76.4
Min nTPM: 37.3
Sample A Female 76.4
Sample B Female 64.7
Sample C Male 59.4
Sample D Male 37.3
Entorhinal cortex
nTPM: 44.9
Samples: 4

Max nTPM: 51.5
Min nTPM: 37.2
Sample A Female 41.3
Sample B Female 49.7
Sample C Male 51.5
Sample D Male 37.2
Subiculum
nTPM: 52.8
Samples: 4

Max nTPM: 58.5
Min nTPM: 46.1
Sample A Female 58.5
Sample B Female 46.1
Sample C Male 51.2
Sample D Male 55.3
Ventral hippocampus
nTPM: 53.1
Samples: 4

Max nTPM: 68.0
Min nTPM: 41.1
Sample A Female 68.0
Sample B Female 41.1
Sample C Male 51.2
Sample D Male 52.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 86.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 86.9
Samples: 4

Max nTPM: 118.7
Min nTPM: 72.1
Sample A Male 77.3
Sample B Male 72.1
Sample C Female 79.5
Sample D Female 118.7
Hippocampal formation
nTPM: 84.0
Samples: 4

Max nTPM: 100.6
Min nTPM: 69.7
Sample A Male 75.3
Sample B Male 90.2
Sample C Female 100.6
Sample D Female 69.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 17.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 17.3
69735831 Antisense, RP_050503_03_F05, Mouse strain C57BL/6J (56 days, male) 17.3

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