HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:100.5 nTPM
HPA:100.5 nTPM
GTEx:83.2 nTPM
FANTOM5:250.0 Scaled Tags Per Million
Pig:63.5 nTPM
Mouse:100.4 nTPM
Allen mouse:12.9 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPUS - Antibody stainingi
Antibody HPA007450
Glial cells Low
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 100.5
Sample id Sample description nTPM
Hippocampus
nTPM: 79.2
2621 Female, age 67, right hemisphere 105.2
1855 Male, age 76, left hemisphere 100.5
1898 Male, age 80, left hemisphere 96.5
2148 Female, age 91, left hemisphere 64.7
2529 Female, age 94, left hemisphere 57.8
1911 Female, age 85, right hemisphere 50.6
Dentate gyrus
nTPM: 100.5
2530 Female, age 94, left hemisphere 185.4
2010 Male, age 76, both hemispheres 120.2
2531 Female, age 67, both hemispheres 83.0
2528 Male, age 74, both hemispheres 80.9
2246 Female, age 85, both hemispheres 75.4
1927 Female, age 91, both hemispheres 57.9
Entorhinal gyrus
nTPM: 56.8
2117 Female, age 91, right hemisphere 80.4
2764 Male, age 80, right hemisphere 76.0
1938 Female, age 85, left hemisphere 53.2
1787 Male, age 76, left hemisphere 46.6
2686 Male, age 75, right hemisphere 43.8
2613 Female, age 94, left hemisphere 40.7
Hippocampus, CA1
nTPM: 82.4
1873 Female, age 85, both hemispheres 146.5
2749 Male, age 80, left hemisphere 81.0
2045 Male, age 76, both hemispheres 76.6
2527 Male, age 74, both hemispheres 71.7
2082 Female, age 91, right hemisphere 36.3
Hippocampus, CA2
nTPM: 73.3
1963 Male, age 80, left hemisphere 123.3
2437 Female, age 94, left hemisphere 89.1
1892 Male, age 76, both hemispheres 74.3
2249 Male, age 74, both hemispheres 64.7
1940 Female, age 85, left hemisphere 50.6
2113 Female, age 91, right hemisphere 37.8
Hippocampus, CA3
nTPM: 57.2
2620 Female, age 94, left hemisphere 104.5
2861 Female, age 67, both hemispheres 76.3
1891 Female, age 85, both hemispheres 64.9
2436 Male, age 74, both hemispheres 47.6
1867 Male, age 76, both hemispheres 37.4
2137 Male, age 80, left hemisphere 12.2
Parahippocampal cortex
nTPM: 55.5
2532 Female, age 72, left hemisphere 92.0
1850 Male, age 80, both hemispheres 63.8
1933 Female, age 85, both hemispheres 60.8
1990 Female, age 91, right hemisphere 57.8
2245 Female, age 91, both hemispheres 57.1
2693 Female, age 94, both hemispheres 50.9
2692 Male, age 74, both hemispheres 48.4
2622 Female, age 67, right hemisphere 45.8
2250 Female, age 67, right hemisphere 40.1
2018 Male, age 76, both hemispheres 37.8
Perirhinal gyrus
nTPM: 56.6
1841 Female, age 85, right hemisphere 67.8
2521 Female, age 94, right hemisphere 59.2
2848 Male, age 76, right hemisphere 58.3
1794 Male, age 80, right hemisphere 58.0
1847 Female, age 91, left hemisphere 39.9
Subiculum
nTPM: 58.6
1901 Male, age 80, both hemispheres 67.8
1977 Female, age 85, both hemispheres 64.5
2042 Male, age 76, both hemispheres 61.2
2729 Female, age 91, right hemisphere 57.4
2619 Male, age 74, both hemispheres 57.3
2438 Female, age 94, left hemisphere 43.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 83.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 83.2
Samples: 197

Max nTPM: 260.3
Min nTPM: 18.4
Std nTPM: 42.2
Median nTPM: 74.3
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 260.3
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 200.1
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 192.3
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 189.7
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 188.9
GTEX-1EMGI-0011-R1b-SM-9OSWZ 60-69 years, male 183.4
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 182.9
GTEX-1GTWX-0011-R1a-SM-CE6RL 60-69 years, male 180.9
GTEX-1H3NZ-0011-R1a-SM-CKZP5 60-69 years, male 177.5
GTEX-N7MT-0011-R1a-SM-CNPO1 60-69 years, female 171.5
GTEX-1I1GS-0011-R1a-SM-CJI43 60-69 years, male 167.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 250.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 250.0
FF:10169-103B7 60 years, female 325.4
FF:10153-102I9 76 years, female 174.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 63.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 50.8
Samples: 4

Max nTPM: 65.4
Min nTPM: 39.7
Sample A Female 65.4
Sample B Female 52.6
Sample C Male 45.6
Sample D Male 39.7
Entorhinal cortex
nTPM: 54.3
Samples: 4

Max nTPM: 63.5
Min nTPM: 47.5
Sample A Female 53.1
Sample B Female 47.5
Sample C Male 63.5
Sample D Male 53.0
Subiculum
nTPM: 55.4
Samples: 4

Max nTPM: 78.9
Min nTPM: 46.2
Sample A Female 78.9
Sample B Female 48.9
Sample C Male 46.2
Sample D Male 47.4
Ventral hippocampus
nTPM: 63.5
Samples: 4

Max nTPM: 95.6
Min nTPM: 35.6
Sample A Female 95.6
Sample B Female 36.1
Sample C Male 86.6
Sample D Male 35.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 100.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 93.3
Samples: 4

Max nTPM: 122.3
Min nTPM: 78.1
Sample A Male 80.9
Sample B Male 91.8
Sample C Female 78.1
Sample D Female 122.3
Hippocampal formation
nTPM: 100.4
Samples: 4

Max nTPM: 128.2
Min nTPM: 80.5
Sample A Male 80.5
Sample B Male 105.9
Sample C Female 128.2
Sample D Female 87.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 12.9
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 12.9
72340122 Antisense, RP_051101_02_A03, Mouse strain C57BL/6J (56 days, male) 14.0
70525793 Antisense, RP_050317_03_B03, Mouse strain C57BL/6J (56 days, male) 11.9

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