HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:28.3 nTPM
HPA:28.3 nTPM
GTEx:37.6 nTPM
FANTOM5:115.8 Scaled Tags Per Million
Pig:42.8 nTPM
Mouse:148.9 nTPM
Allen mouse:8.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA009076
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 28.3
Sample id Sample description nTPM
Hippocampus
nTPM: 18.7
1898 Male, age 80, left hemisphere 21.9
1911 Female, age 85, right hemisphere 20.5
2621 Female, age 67, right hemisphere 20.1
1855 Male, age 76, left hemisphere 18.9
2529 Female, age 94, left hemisphere 18.9
2148 Female, age 91, left hemisphere 12.2
Dentate gyrus
nTPM: 17.9
1927 Female, age 91, both hemispheres 20.0
2530 Female, age 94, left hemisphere 19.5
2246 Female, age 85, both hemispheres 18.7
2010 Male, age 76, both hemispheres 17.2
2528 Male, age 74, both hemispheres 16.7
2531 Female, age 67, both hemispheres 15.2
Entorhinal gyrus
nTPM: 21.7
2613 Female, age 94, left hemisphere 25.3
1787 Male, age 76, left hemisphere 23.3
1938 Female, age 85, left hemisphere 22.4
2764 Male, age 80, right hemisphere 22.2
2686 Male, age 75, right hemisphere 18.6
2117 Female, age 91, right hemisphere 18.4
Hippocampus, CA1
nTPM: 17.6
2749 Male, age 80, left hemisphere 27.5
1873 Female, age 85, both hemispheres 17.0
2527 Male, age 74, both hemispheres 15.1
2082 Female, age 91, right hemisphere 14.3
2045 Male, age 76, both hemispheres 13.8
Hippocampus, CA2
nTPM: 21.2
2437 Female, age 94, left hemisphere 28.2
1892 Male, age 76, both hemispheres 27.1
1940 Female, age 85, left hemisphere 24.5
1963 Male, age 80, left hemisphere 17.2
2113 Female, age 91, right hemisphere 15.8
2249 Male, age 74, both hemispheres 14.6
Hippocampus, CA3
nTPM: 18.4
1867 Male, age 76, both hemispheres 26.7
2137 Male, age 80, left hemisphere 23.6
1891 Female, age 85, both hemispheres 21.2
2436 Male, age 74, both hemispheres 16.9
2861 Female, age 67, both hemispheres 11.5
2620 Female, age 94, left hemisphere 10.5
Parahippocampal cortex
nTPM: 23.6
2693 Female, age 94, both hemispheres 30.1
2532 Female, age 72, left hemisphere 27.2
2250 Female, age 67, right hemisphere 26.3
1850 Male, age 80, both hemispheres 26.1
2245 Female, age 91, both hemispheres 23.8
1990 Female, age 91, right hemisphere 23.5
2018 Male, age 76, both hemispheres 21.9
1933 Female, age 85, both hemispheres 21.8
2692 Male, age 74, both hemispheres 18.5
2622 Female, age 67, right hemisphere 17.0
Perirhinal gyrus
nTPM: 28.3
1841 Female, age 85, right hemisphere 30.9
1794 Male, age 80, right hemisphere 30.5
2521 Female, age 94, right hemisphere 30.3
2848 Male, age 76, right hemisphere 26.9
1847 Female, age 91, left hemisphere 22.7
Subiculum
nTPM: 20.8
1901 Male, age 80, both hemispheres 25.1
2042 Male, age 76, both hemispheres 24.2
1977 Female, age 85, both hemispheres 21.8
2438 Female, age 94, left hemisphere 21.4
2619 Male, age 74, both hemispheres 17.8
2729 Female, age 91, right hemisphere 14.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 37.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 37.6
Samples: 197

Max nTPM: 74.9
Min nTPM: 21.0
Std nTPM: 9.9
Median nTPM: 36.3
GTEX-T6MN-0011-R1A-SM-32QOY 50-59 years, male 74.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 74.7
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 67.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 62.4
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 62.3
GTEX-12WSH-0011-R1a-SM-5GU5V 50-59 years, male 60.7
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 60.7
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 59.8
GTEX-PVOW-0011-R1A-SM-32PL6 40-49 years, male 59.0
GTEX-1H3O1-0011-R1b-SM-CL554 60-69 years, male 58.8
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 58.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 115.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 115.8
FF:10169-103B7 60 years, female 137.0
FF:10153-102I9 76 years, female 94.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 42.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 42.8
Samples: 4

Max nTPM: 52.9
Min nTPM: 36.1
Sample A Female 52.9
Sample B Female 41.2
Sample C Male 40.8
Sample D Male 36.1
Entorhinal cortex
nTPM: 39.2
Samples: 4

Max nTPM: 45.3
Min nTPM: 34.1
Sample A Female 38.8
Sample B Female 45.3
Sample C Male 38.6
Sample D Male 34.1
Subiculum
nTPM: 38.3
Samples: 4

Max nTPM: 50.4
Min nTPM: 30.3
Sample A Female 50.4
Sample B Female 37.5
Sample C Male 30.3
Sample D Male 34.9
Ventral hippocampus
nTPM: 32.0
Samples: 4

Max nTPM: 34.1
Min nTPM: 29.6
Sample A Female 34.1
Sample B Female 30.3
Sample C Male 29.6
Sample D Male 34.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 148.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 148.9
Samples: 4

Max nTPM: 160.7
Min nTPM: 137.6
Sample A Male 139.7
Sample B Male 160.7
Sample C Female 137.6
Sample D Female 157.5
Hippocampal formation
nTPM: 123.9
Samples: 4

Max nTPM: 143.7
Min nTPM: 114.1
Sample A Male 143.7
Sample B Male 119.9
Sample C Female 117.8
Sample D Female 114.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 8.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 8.1
564781 Antisense, RP_040826_01_F08, Mouse strain C57BL/6J (56 days, male) 8.1

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