HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:28.7 nTPM
HPA:28.7 nTPM
GTEx:21.2 nTPM
FANTOM5:5.7 Scaled Tags Per Million
Pig:10.6 nTPM
Mouse:8.7 nTPM
Allen mouse:1.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 28.7
Sample id Sample description nTPM
Hippocampus
nTPM: 28.7
2529 Female, age 94, left hemisphere 35.9
1911 Female, age 85, right hemisphere 31.8
2148 Female, age 91, left hemisphere 30.0
1898 Male, age 80, left hemisphere 25.5
2621 Female, age 67, right hemisphere 24.8
1855 Male, age 76, left hemisphere 24.3
Dentate gyrus
nTPM: 26.1
2528 Male, age 74, both hemispheres 33.6
2246 Female, age 85, both hemispheres 27.0
2530 Female, age 94, left hemisphere 24.7
1927 Female, age 91, both hemispheres 24.2
2010 Male, age 76, both hemispheres 23.8
2531 Female, age 67, both hemispheres 23.4
Entorhinal gyrus
nTPM: 23.6
2117 Female, age 91, right hemisphere 30.9
2686 Male, age 75, right hemisphere 27.2
2764 Male, age 80, right hemisphere 25.4
1787 Male, age 76, left hemisphere 22.8
1938 Female, age 85, left hemisphere 18.1
2613 Female, age 94, left hemisphere 17.2
Hippocampus, CA1
nTPM: 27.2
2527 Male, age 74, both hemispheres 33.9
2082 Female, age 91, right hemisphere 32.7
1873 Female, age 85, both hemispheres 27.6
2045 Male, age 76, both hemispheres 22.6
2749 Male, age 80, left hemisphere 19.0
Hippocampus, CA2
nTPM: 25.6
2113 Female, age 91, right hemisphere 34.2
2249 Male, age 74, both hemispheres 29.2
1963 Male, age 80, left hemisphere 25.5
1940 Female, age 85, left hemisphere 23.6
2437 Female, age 94, left hemisphere 22.7
1892 Male, age 76, both hemispheres 18.6
Hippocampus, CA3
nTPM: 25.5
2861 Female, age 67, both hemispheres 29.9
1891 Female, age 85, both hemispheres 28.6
2436 Male, age 74, both hemispheres 25.3
2620 Female, age 94, left hemisphere 25.2
2137 Male, age 80, left hemisphere 23.7
1867 Male, age 76, both hemispheres 20.5
Parahippocampal cortex
nTPM: 24.6
2692 Male, age 74, both hemispheres 29.1
2622 Female, age 67, right hemisphere 28.7
2245 Female, age 91, both hemispheres 26.8
2018 Male, age 76, both hemispheres 26.7
2250 Female, age 67, right hemisphere 23.7
1933 Female, age 85, both hemispheres 22.7
1990 Female, age 91, right hemisphere 22.4
2693 Female, age 94, both hemispheres 22.2
2532 Female, age 72, left hemisphere 22.1
1850 Male, age 80, both hemispheres 21.3
Perirhinal gyrus
nTPM: 22.8
2848 Male, age 76, right hemisphere 26.8
1841 Female, age 85, right hemisphere 23.4
2521 Female, age 94, right hemisphere 21.8
1847 Female, age 91, left hemisphere 21.2
1794 Male, age 80, right hemisphere 20.8
Subiculum
nTPM: 26.3
2619 Male, age 74, both hemispheres 32.8
2729 Female, age 91, right hemisphere 32.2
1901 Male, age 80, both hemispheres 24.2
2042 Male, age 76, both hemispheres 23.4
1977 Female, age 85, both hemispheres 23.1
2438 Female, age 94, left hemisphere 21.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 21.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 21.2
Samples: 197

Max nTPM: 53.4
Min nTPM: 5.6
Std nTPM: 7.9
Median nTPM: 20.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 53.4
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 49.5
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 49.5
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 46.9
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 45.6
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 43.5
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 42.8
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 39.1
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y 40-49 years, male 33.9
GTEX-11EI6-0011-R1a-SM-DO93L 60-69 years, male 33.5
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 32.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 5.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 5.7
FF:10169-103B7 60 years, female 7.3
FF:10153-102I9 76 years, female 4.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 10.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 10.2
Samples: 4

Max nTPM: 13.3
Min nTPM: 8.4
Sample A Female 13.3
Sample B Female 10.1
Sample C Male 9.1
Sample D Male 8.4
Entorhinal cortex
nTPM: 9.8
Samples: 4

Max nTPM: 12.9
Min nTPM: 8.0
Sample A Female 9.1
Sample B Female 9.3
Sample C Male 12.9
Sample D Male 8.0
Subiculum
nTPM: 9.7
Samples: 4

Max nTPM: 12.7
Min nTPM: 8.2
Sample A Female 12.7
Sample B Female 8.2
Sample C Male 8.9
Sample D Male 9.1
Ventral hippocampus
nTPM: 10.6
Samples: 4

Max nTPM: 12.3
Min nTPM: 8.3
Sample A Female 10.1
Sample B Female 8.3
Sample C Male 11.5
Sample D Male 12.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 8.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 6.8
Samples: 4

Max nTPM: 8.5
Min nTPM: 4.8
Sample A Male 8.5
Sample B Male 7.3
Sample C Female 6.6
Sample D Female 4.8
Hippocampal formation
nTPM: 8.6
Samples: 4

Max nTPM: 9.8
Min nTPM: 7.5
Sample A Male 7.5
Sample B Male 9.8
Sample C Female 9.2
Sample D Female 8.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 1.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 1.1
67765718 Antisense, RP_040916_01_F01, Mouse strain C57BL/6J (56 days, male) 1.1

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