HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:102.0 nTPM
HPA:102.0 nTPM
GTEx:43.5 nTPM
FANTOM5:177.7 Scaled Tags Per Million
Pig:77.0 nTPM
Mouse:82.2 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA006308Antibody HPA071064
Glial cells HighHigh
Neuronal cells HighNot detected




HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 102.0
Sample id Sample description nTPM
Hippocampus
nTPM: 97.4
2529 Female, age 94, left hemisphere 104.8
1911 Female, age 85, right hemisphere 103.5
1855 Male, age 76, left hemisphere 102.6
2148 Female, age 91, left hemisphere 101.7
1898 Male, age 80, left hemisphere 88.8
2621 Female, age 67, right hemisphere 82.7
Dentate gyrus
nTPM: 79.6
2528 Male, age 74, both hemispheres 97.7
2246 Female, age 85, both hemispheres 89.4
1927 Female, age 91, both hemispheres 88.8
2010 Male, age 76, both hemispheres 85.7
2530 Female, age 94, left hemisphere 63.6
2531 Female, age 67, both hemispheres 52.5
Entorhinal gyrus
nTPM: 84.2
2117 Female, age 91, right hemisphere 112.8
1938 Female, age 85, left hemisphere 97.1
2764 Male, age 80, right hemisphere 77.3
1787 Male, age 76, left hemisphere 76.4
2686 Male, age 75, right hemisphere 73.9
2613 Female, age 94, left hemisphere 67.6
Hippocampus, CA1
nTPM: 102.0
2749 Male, age 80, left hemisphere 139.3
2527 Male, age 74, both hemispheres 119.0
1873 Female, age 85, both hemispheres 90.6
2082 Female, age 91, right hemisphere 87.7
2045 Male, age 76, both hemispheres 73.6
Hippocampus, CA2
nTPM: 86.2
2249 Male, age 74, both hemispheres 113.8
2113 Female, age 91, right hemisphere 100.3
1940 Female, age 85, left hemisphere 81.7
2437 Female, age 94, left hemisphere 77.0
1892 Male, age 76, both hemispheres 74.3
1963 Male, age 80, left hemisphere 70.2
Hippocampus, CA3
nTPM: 94.4
2137 Male, age 80, left hemisphere 139.7
2436 Male, age 74, both hemispheres 110.2
1867 Male, age 76, both hemispheres 91.5
1891 Female, age 85, both hemispheres 89.9
2620 Female, age 94, left hemisphere 70.7
2861 Female, age 67, both hemispheres 64.6
Parahippocampal cortex
nTPM: 94.4
2250 Female, age 67, right hemisphere 113.3
2245 Female, age 91, both hemispheres 108.3
1933 Female, age 85, both hemispheres 100.4
2692 Male, age 74, both hemispheres 96.9
2018 Male, age 76, both hemispheres 92.1
2622 Female, age 67, right hemisphere 91.9
1850 Male, age 80, both hemispheres 91.1
1990 Female, age 91, right hemisphere 88.7
2693 Female, age 94, both hemispheres 87.6
2532 Female, age 72, left hemisphere 73.8
Perirhinal gyrus
nTPM: 96.2
1847 Female, age 91, left hemisphere 101.7
1841 Female, age 85, right hemisphere 101.6
2521 Female, age 94, right hemisphere 95.3
1794 Male, age 80, right hemisphere 92.4
2848 Male, age 76, right hemisphere 89.8
Subiculum
nTPM: 94.6
2729 Female, age 91, right hemisphere 109.7
2619 Male, age 74, both hemispheres 98.4
1901 Male, age 80, both hemispheres 92.9
2438 Female, age 94, left hemisphere 92.7
2042 Male, age 76, both hemispheres 90.1
1977 Female, age 85, both hemispheres 83.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 43.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 43.5
Samples: 197

Max nTPM: 127.6
Min nTPM: 0.0
Std nTPM: 28.4
Median nTPM: 42.5
GTEX-13OVJ-0011-R1b-SM-5L3I6 50-59 years, female 127.6
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 115.0
GTEX-QMR6-0011-R1A-SM-32PKW 50-59 years, male 113.4
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 112.7
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 112.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 111.0
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 99.6
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 97.0
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 96.5
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 94.0
GTEX-ZDXO-0011-R1a-SM-4WKF4 60-69 years, male 93.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 177.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 177.7
FF:10169-103B7 60 years, female 188.3
FF:10153-102I9 76 years, female 167.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 77.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 58.7
Samples: 4

Max nTPM: 67.4
Min nTPM: 47.0
Sample A Female 57.8
Sample B Female 67.4
Sample C Male 62.5
Sample D Male 47.0
Entorhinal cortex
nTPM: 56.4
Samples: 4

Max nTPM: 67.4
Min nTPM: 50.0
Sample A Female 50.4
Sample B Female 57.6
Sample C Male 67.4
Sample D Male 50.0
Subiculum
nTPM: 77.0
Samples: 4

Max nTPM: 88.4
Min nTPM: 61.9
Sample A Female 88.4
Sample B Female 84.1
Sample C Male 73.5
Sample D Male 61.9
Ventral hippocampus
nTPM: 71.6
Samples: 4

Max nTPM: 97.0
Min nTPM: 54.8
Sample A Female 54.8
Sample B Female 64.4
Sample C Male 97.0
Sample D Male 70.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 82.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 82.2
Samples: 4

Max nTPM: 87.8
Min nTPM: 77.3
Sample A Male 87.8
Sample B Male 77.3
Sample C Female 78.7
Sample D Female 84.8
Hippocampal formation
nTPM: 62.9
Samples: 4

Max nTPM: 79.9
Min nTPM: 50.6
Sample A Male 79.9
Sample B Male 56.6
Sample C Female 50.6
Sample D Female 64.4

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
70431283 Antisense, RP_050614_02_E07, Mouse strain C57BL/6J (56 days, male) 0.4

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