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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:207.4 nTPM
FANTOM5:591.0 Scaled Tags Per Million
Pig:500.0 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA003733Antibody CAB068243Antibody CAB068244
Glial cells Not detectedLowNot detected
Neuronal cells Not detectedMediumMedium







CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 207.4
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 207.4
Samples: 246

Max nTPM: 557.2
Min nTPM: 21.9
Std nTPM: 110.0
Median nTPM: 206.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 557.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 502.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 476.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 459.4
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 454.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 450.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 448.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 440.3
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 429.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 427.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 419.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 414.6
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 404.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 399.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 390.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 388.2
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 382.6
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 371.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 371.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 363.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 361.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 354.7
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 353.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 350.6
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 347.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 342.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 337.9
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 335.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 333.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 331.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 330.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 329.8
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 329.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 328.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 327.1
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 326.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 325.4
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 324.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 324.4
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 321.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 319.4
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 318.5
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 316.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 313.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 309.5
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 309.3
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 308.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 305.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 304.5
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 303.8
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 302.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 294.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 294.1
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 293.1
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 291.4
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 289.6
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 288.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 287.3
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 286.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 285.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 285.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 282.1
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 273.7
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 271.1
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 270.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 268.8
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 268.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 267.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 267.5
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 267.0
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 266.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 266.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 265.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 263.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 263.7
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 263.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 263.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 263.0
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 260.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 259.1
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 258.7
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 258.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 258.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 254.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 253.2
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 252.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 250.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 249.1
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 247.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 244.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 244.6
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 244.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 241.3
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 239.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 238.5
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 236.2
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 231.1
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 230.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 230.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 229.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 229.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 228.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 228.0
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 227.3
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 227.1
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 221.0
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 219.6
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 218.3
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 217.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 216.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 216.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 216.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 215.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 214.3
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 213.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 213.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 212.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 212.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 209.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 209.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 208.2
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 207.2
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 206.3
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 206.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 205.3
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 205.0
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 203.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 202.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 202.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 200.0
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 199.7
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 198.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 198.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 198.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 196.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 195.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 191.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 189.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 186.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 184.6
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 181.5
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 181.1
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 180.8
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 180.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 178.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 177.1
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 176.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 173.9
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 173.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 173.6
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 173.5
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 167.4
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 166.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 166.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 166.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 165.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 165.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 163.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 161.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 160.7
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 159.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 159.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 156.3
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 154.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 151.4
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 150.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 149.7
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 148.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 144.6
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 144.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 143.0
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 142.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 140.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 129.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 128.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 126.9
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 126.5
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 125.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 125.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 122.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 120.2
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 119.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 118.6
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 117.5
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 116.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 115.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 115.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 111.1
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 109.7
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 106.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 104.7
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 104.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 102.2
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 100.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 99.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 98.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 93.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 92.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 92.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 92.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 88.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 85.9
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 85.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 84.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 83.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 83.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 82.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 81.8
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 79.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 77.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 77.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 75.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 73.2
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 73.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 71.4
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 71.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 70.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 70.0
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 67.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 66.2
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 65.0
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 64.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 62.5
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 61.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 60.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 57.8
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 57.7
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 56.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 56.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 54.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 50.4
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 48.7
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 43.1
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 40.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 40.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 38.0
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 37.4
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 37.2
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 35.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 35.4
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 35.4
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 33.4
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 32.5
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 28.5
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 26.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 21.9
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 591.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 591.0
FF:10164-103B2 76 years, female 591.0

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 500.0
Pig sample Sample description nTPM
Caudate
nTPM: 500.0
Samples: 4

Max nTPM: 640.7
Min nTPM: 364.3
Sample A Female 364.3
Sample B Female 518.2
Sample C Male 640.7
Sample D Male 476.9

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