We use cookies to enhance the usability of our website. If you continue, we'll assume that you are happy to receive all cookies. More information. Don't show this again.
JPH3
SECTIONS
  • TISSUE
  • BRAIN
  • SINGLE CELL TYPE
  • TISSUE CELL TYPE
  • PATHOLOGY
  • DISEASE
  • IMMUNE CELL
  • BLOOD PROTEIN
  • SUBCELLULAR
  • CELL LINE
  • STRUCTURE
  • METABOLIC
ABOUT
  • INTRODUCTION
  • HISTORY
  • ORGANIZATION
  • PUBLICATIONS
  • ANTIBODY SUBMISSION
  • ANTIBODY AVAILABILITY
  • ACKNOWLEDGMENTS
  • CONTACT
NEWS
  • NEWS ARTICLES
  • PRESS ROOM
LEARN
  • DICTIONARY
  • PROTEIN CLASSES
  • PROTEIN EVIDENCE
  • METHODS
  • EDUCATIONAL VIDEOS
DATA
  • DOWNLOADABLE DATA
  • PUBLICATION DATA
  • RELEASE HISTORY
  • SARS-COV-2
HELP
  • ANTIBODY VALIDATION
  • ASSAYS & ANNOTATION
  • DISCLAIMER
  • HELP & FAQ
  • PRIVACY STATEMENT
  • LICENCE & CITATION
Fields »
Search result

Field
Term
Gene name
Class
Subclass
Class
Keyword
Chromosome
External id
Tissue
Cell type
Expression
Patient ID
Tissue
Category
Cluster
Reliability
Brain region
Category
Brain region
Category
Brain region
Category
Reliability
Cell type
Category
Cluster
Tissue
Cell type
Enrichment
Cancer
Prognosis
Cancer
Category
Cell type
Category
Cell lineage
Category
Cluster
Annotation
Disease
Location
Searches
Location
Cell line
Type
Phase
Reliability
Cancer type
Category
Cluster
Pathway
Category
Score
Score
Score
Validation
Validation
Validation
Validation
Antibodies
Protein structure
In atlas
Column


  • SUMMARY

  • TISSUE

  • BRAIN

  • SINGLE CELL

  • TISSUE CELL

  • PATHOLOGY

  • DISEASE

  • IMMUNE

  • BLOOD

  • SUBCELL

  • CELL LINE

  • STRUCTURE

  • METABOLIC

  • JPH3
BRAIN BASAL GANGLIA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
Brain proteome
Basal ganglia
BASAL GANGLIA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:24.6 nTPM
HPA:24.6 nTPM
GTEx:84.0 nTPM
FANTOM5:65.0 Scaled Tags Per Million
Mouse:74.0 nTPM
Allen mouse:4.2 Expression energy

BASAL GANGLIA - Annotated protein expression
Pending normal tissue analysis

BASAL GANGLIA - HPA Brain RNA-seq
Max nTPM 24.6
Sample id Sample description nTPM
Caudate nucleus
nTPM: 9.1
2290 Female, age 72, unknown 17.2
1781 Male, age 74, unknown 12.2
1857 Female, age 85, left hemisphere 11.5
2288 Male, age 75, left hemisphere 10.0
2846 Female, age 79, unknown 9.9
2289 Male, age 61, right hemisphere 7.6
1854 Male, age 80, left hemisphere 4.1
2481 Female, age 94, left hemisphere 0.0
Claustrum
nTPM: 12.9
2284 Female, age 91, both hemispheres 25.5
2568 Male, age 61, both hemispheres 23.7
2645 Female, age 72, unknown 22.8
2491 Male, age 75, both hemispheres 22.6
2198 Male, age 80, both hemispheres 10.8
2392 Female, age 94, both hemispheres 6.3
1956 Male, age 74, unknown 4.0
2196 Female, age 79, unknown 0.0
2292 Female, age 85, both hemispheres 0.0
Globus pallidus, externus
nTPM: 0.0
1996 Male, age 80, right hemisphere 0.0
2395 Male, age 75, both hemispheres 0.0
2567 Female, age 72, unknown 0.0
2646 Male, age 61, right hemisphere 0.0
2772 Female, age 79, unknown 0.0
Globus pallidus, internus
nTPM: 0.0
1818 Male, age 74, unknown 0.0
2037 Male, age 80, right hemisphere 0.0
2111 Female, age 85, right hemisphere 0.0
2287 Male, age 75, right hemisphere 0.0
2483 Female, age 94, right hemisphere 0.0
2566 Female, age 72, unknown 0.0
2778 Female, age 91, both hemispheres 0.0
Nucleus accumbens
nTPM: 8.2
1856 Female, age 91, right hemisphere 19.6
1783 Male, age 74, unknown 19.1
2824 Male, age 61, right hemisphere 12.7
1806 Female, age 85, left hemisphere 8.4
2286 Male, age 75, left hemisphere 6.2
2391 Female, age 94, left hemisphere 0.0
2698 Female, age 72, unknown 0.0
2732 Male, age 80, right hemisphere 0.0
Nucleus basalis of Meynert
nTPM: 2.3
2484 Female, age 94, left hemisphere 7.2
2393 Male, age 80, right hemisphere 1.7
2821 Male, age 75, both hemispheres 0.4
2569 Male, age 61, both hemispheres 0.0
Nucleus of the diagonal band
nTPM: 17.8
2029 Male, age 61, right hemisphere 31.3
2775 Male, age 80, right hemisphere 19.1
2195 Female, age 85, both hemispheres 18.8
1812 Female, age 91, both hemispheres 18.4
1979 Male, age 74, unknown 1.1
Olfactory tubercle
nTPM: 24.6
2487 Female, age 94, left hemisphere 31.5
2856 Male, age 75, right hemisphere 28.3
1998 Female, age 91, both hemispheres 26.5
1846 Male, age 80, right hemisphere 12.2
Putamen
nTPM: 13.1
2647 Male, age 75, left hemisphere 24.0
2489 Female, age 72, unknown 18.1
1829 Male, age 74, unknown 14.5
1937 Female, age 91, right hemisphere 12.6
1838 Male, age 80, right hemisphere 12.0
2466 Female, age 79, unknown 10.4
2482 Female, age 94, left hemisphere 0.0
Septal nuclei
nTPM: 13.1
1960 Male, age 74, unknown 27.8
2629 Female, age 94, right hemisphere 18.6
2031 Female, age 72, unknown 16.2
2059 Female, age 85, both hemispheres 15.4
2009 Female, age 91, both hemispheres 12.4
2394 Male, age 61, left hemisphere 1.6
2199 Male, age 80, right hemisphere 0.0

BASAL GANGLIA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Max average nTPM 84.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 74.3
Samples: 246

Max nTPM: 161.0
Min nTPM: 11.6
Std nTPM: 33.8
Median nTPM: 74.2
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 161.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 160.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 151.3
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 150.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 149.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 144.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 143.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 139.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 134.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 133.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 131.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 130.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 129.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 129.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 128.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 126.8
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 125.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 125.6
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 124.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 124.0
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 122.4
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 120.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 119.8
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 119.4
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 116.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 115.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 114.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 114.3
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 114.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 113.7
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 113.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 112.9
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 111.9
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 111.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 111.1
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 111.1
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 110.5
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 109.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 109.6
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 109.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 109.3
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 108.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 108.2
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 108.1
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 106.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 106.1
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 105.7
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 105.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 105.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 104.8
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 104.8
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 104.3
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 104.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 103.4
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 102.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 101.5
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 101.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 101.0
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 99.1
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 99.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 98.7
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 98.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 97.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 96.8
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 96.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 96.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 96.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 95.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 95.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 94.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 94.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 94.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 93.6
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 93.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 92.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 91.9
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 91.9
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 90.9
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 90.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 90.6
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 90.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 90.3
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 90.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 89.6
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 89.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 89.3
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 88.4
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 88.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 88.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 88.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 87.6
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 87.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 87.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 87.0
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 86.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 86.4
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 86.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 86.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 85.7
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 83.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 82.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 82.2
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 82.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 81.7
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 81.5
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 81.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 80.6
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 80.6
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 80.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 80.2
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 80.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 79.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 79.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 78.7
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 78.2
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 78.1
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 77.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 77.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 77.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 76.8
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 75.8
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 75.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 74.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 73.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 73.7
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 73.4
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 73.4
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 73.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 73.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 73.0
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 72.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 72.2
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 72.0
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 71.7
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 71.3
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 71.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 70.9
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 70.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 70.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 68.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 68.1
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 67.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 67.2
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 67.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 66.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 66.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 66.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 66.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 65.5
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 65.3
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 65.0
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 64.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 63.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 62.6
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 62.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 62.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 61.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 61.2
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 61.2
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 61.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 60.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 58.5
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 58.1
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 57.9
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 57.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 57.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 57.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 57.3
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 57.2
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 56.9
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 56.9
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 56.8
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 56.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 55.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 53.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 53.5
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 52.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 51.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 51.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 50.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 46.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 46.7
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 46.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 46.3
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 46.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 45.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 44.6
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 43.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 41.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 41.3
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 41.1
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 40.9
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 40.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 39.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 39.5
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 39.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 38.6
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 38.2
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 38.2
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 37.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 37.0
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 37.0
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 36.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 36.2
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 35.3
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 35.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 35.1
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 34.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 34.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 34.1
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 33.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 33.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 32.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 32.1
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 32.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 31.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 31.5
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 30.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 30.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 30.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 30.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 29.9
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 29.6
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 29.1
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 28.7
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 26.4
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 26.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 26.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 26.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 25.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 23.8
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 23.1
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 23.0
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 22.3
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 21.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 19.3
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 16.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 16.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 15.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 15.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 15.0
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 14.0
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 13.4
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 12.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 11.8
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 11.6
Show allShow less
Brain - Nucleus accumbens (basal ganglia)
Average nTPM: 84.0
Samples: 246

Max nTPM: 155.4
Min nTPM: 6.9
Std nTPM: 30.5
Median nTPM: 88.4
GTEX-11DZ1-0011-R6b-SM-DNZZG 50-59 years, male 155.4
GTEX-13FHO-0011-R6b-SM-5LZX1 60-69 years, male 152.7
GTEX-12ZZZ-0011-R6b-SM-5EQ5B 60-69 years, male 151.9
GTEX-11NV4-0011-R6a-SM-57WD5 60-69 years, male 149.0
GTEX-1HBPH-0011-R6a-SM-CKZOV 40-49 years, female 147.2
GTEX-1I1GR-0011-R6a-SM-CMKHI 60-69 years, male 137.9
GTEX-11OF3-0011-R6b-SM-57WBG 60-69 years, male 137.7
GTEX-12ZZW-0011-R6a-SM-5DUVZ 50-59 years, male 135.8
GTEX-139TT-0011-R6b-SM-5J2ON 60-69 years, male 135.7
GTEX-1F7RK-0011-R6b-SM-ARZMG 20-29 years, female 133.4
GTEX-ZDXO-0011-R6a-SM-4WWCT 60-69 years, male 132.8
GTEX-13NYB-0011-R6b-SM-5MR51 40-49 years, male 131.6
GTEX-12WSC-0011-R6b-SM-5LU99 50-59 years, male 131.4
GTEX-1J8Q2-0011-R6a-SM-CKZPG 60-69 years, male 131.2
GTEX-1MJK2-0011-R6a-SM-EXUS3 50-59 years, male 130.8
GTEX-13FHP-0011-R6b-SM-5LZY6 50-59 years, male 130.3
GTEX-WHSE-0011-R6A-SM-3P5ZP 20-29 years, male 129.2
GTEX-1F75A-0011-R6b-SM-9QEHD 50-59 years, male 124.4
GTEX-1I1CD-0011-R6b-SM-CJI3Y 60-69 years, female 123.6
GTEX-144GO-0011-R6b-SM-5S2V7 60-69 years, male 122.8
GTEX-12ZZY-0011-R6b-SM-5EGLA 60-69 years, male 122.6
GTEX-14PQA-0011-R6b-SM-6AJAM 50-59 years, female 120.8
GTEX-12WSM-0011-R6b-SM-5EQ6N 60-69 years, male 120.7
GTEX-14ASI-0011-R6a-SM-5S2UZ 60-69 years, male 120.3
GTEX-12WSH-0011-R6b-SM-5P9F4 50-59 years, male 119.3
GTEX-X4XX-0011-R6B-SM-46MWP 60-69 years, male 118.2
GTEX-ZE9C-0011-R6a-SM-4WWCW 60-69 years, male 117.9
GTEX-13X6J-0011-R6a-SM-5PNUB 50-59 years, male 117.6
GTEX-1E1VI-0011-R6a-SM-9OSVJ 50-59 years, male 116.5
GTEX-1F88E-0011-R6a-SM-CKZNW 60-69 years, female 116.5
GTEX-1AX9I-0011-R6a-SM-7P8PK 60-69 years, male 114.8
GTEX-1F75W-0011-R6a-SM-9QEI5 60-69 years, male 113.3
GTEX-14BIM-0011-R6b-SM-5S2VB 60-69 years, female 113.0
GTEX-13S7M-0011-R6b-SM-5O9D8 60-69 years, female 112.5
GTEX-1HGF4-0011-R6a-SM-A96S1 60-69 years, male 112.4
GTEX-1F6I4-0011-R6a-SM-CE6R4 60-69 years, male 112.3
GTEX-1H3NZ-0011-R6b-SM-A9G1N 60-69 years, male 112.3
GTEX-17HG3-0011-R6b-SM-79OK8 30-39 years, female 112.2
GTEX-1HUB1-0011-R6b-SM-ARU6W 60-69 years, male 111.8
GTEX-13OW6-0011-R6b-SM-5L3GR 50-59 years, male 111.7
GTEX-1GZ2Q-0011-R6a-SM-9OSWM 40-49 years, male 111.5
GTEX-13IVO-0011-R6b-SM-5K7X9 70-79 years, male 111.4
GTEX-1313W-0011-R6a-SM-5K7XO 50-59 years, female 111.3
GTEX-17EVQ-0011-R6a-SM-7189U 70-79 years, male 111.1
GTEX-13OVL-0011-R6a-SM-5L3G4 50-59 years, male 110.8
GTEX-1GF9V-0011-R6b-SM-CJI2Q 60-69 years, male 110.5
GTEX-12WSF-0011-R6b-SM-5HL8W 70-79 years, male 109.6
GTEX-1HT8W-0011-R6a-SM-CM2SY 30-39 years, male 109.6
GTEX-145MH-0011-R6a-SM-5PNZ7 50-59 years, male 109.4
GTEX-14BIN-0011-R6a-SM-5S2RH 50-59 years, female 109.3
GTEX-1IDJH-0011-R6a-SM-A9SLZ 70-79 years, male 108.8
GTEX-1HBPI-0011-R6b-SM-A9G1T 50-59 years, male 108.7
GTEX-1HR9M-0011-R6a-SM-ARU6Z 60-69 years, male 108.6
GTEX-1GF9W-0011-R6b-SM-9QEIE 60-69 years, male 108.1
GTEX-11TTK-0011-R6b-SM-DNZZW 60-69 years, female 108.0
GTEX-13112-0011-R6b-SM-5DUVK 50-59 years, male 107.9
GTEX-1EX96-0011-R6a-SM-9OSVV 50-59 years, male 107.9
GTEX-Q2AG-0011-R6A-SM-2HML7 40-49 years, female 107.3
GTEX-N7MS-0011-R6a-SM-2HMJ4 60-69 years, male 107.1
GTEX-18A6Q-0011-R6a-SM-7LG6R 60-69 years, male 106.8
GTEX-13O3Q-0011-R6a-SM-5KM2V 50-59 years, male 106.7
GTEX-13NYS-0011-R6b-SM-5MR3R 60-69 years, male 106.4
GTEX-11DXY-0011-R6a-SM-DNZZF 60-69 years, male 105.9
GTEX-13VXU-0011-R6a-SM-5SI71 50-59 years, male 105.4
GTEX-Z93S-0011-R6b-SM-4RGNJ 50-59 years, male 105.2
GTEX-1I1GQ-0011-R6b-SM-CE6SE 50-59 years, male 104.6
GTEX-11PRG-0011-R6b-SM-DO923 50-59 years, male 104.0
GTEX-XMD1-0011-R6A-SM-4AT5K 60-69 years, male 103.0
GTEX-13O3O-0011-R6b-SM-5P9GY 60-69 years, female 102.8
GTEX-13FLV-0011-R6a-SM-5KLZ4 50-59 years, male 102.6
GTEX-1B933-0011-R6b-SM-79OOQ 50-59 years, female 101.3
GTEX-1EMGI-0011-R6a-SM-9OSVR 60-69 years, male 100.9
GTEX-18464-0011-R6a-SM-731CA 50-59 years, male 100.8
GTEX-1GMR8-0011-R6b-SM-CE6RC 50-59 years, female 100.6
GTEX-131XH-0011-R6a-SM-5KM2G 50-59 years, male 100.2
GTEX-17F97-0011-R6a-SM-7EPGS 50-59 years, male 100.0
GTEX-12ZZX-0011-R6a-SM-5HL8L 40-49 years, female 99.8
GTEX-14PN4-0011-R6b-SM-69LQU 50-59 years, male 99.8
GTEX-144GL-0011-R6a-SM-5P9HW 50-59 years, male 99.7
GTEX-NL3H-0011-R6a-SM-2I3G8 60-69 years, male 99.7
GTEX-R55E-0011-R6A-SM-2TC5T 20-29 years, male 99.4
GTEX-13G51-0011-R6b-SM-5LZX4 60-69 years, male 99.3
GTEX-1B8SF-0011-R6b-SM-7MXUD 60-69 years, male 99.1
GTEX-1H1CY-0011-R6b-SM-CE6RP 60-69 years, female 99.1
GTEX-14ABY-0011-R6a-SM-5PNWR 50-59 years, male 98.9
GTEX-14JG1-0011-R6b-SM-5YYAU 40-49 years, male 98.0
GTEX-15ER7-0011-R6a-SM-6M46M 20-29 years, female 97.0
GTEX-X585-0011-R6A-SM-46MVJ 50-59 years, male 96.7
GTEX-13SLX-0011-R6a-SM-5PNX4 50-59 years, female 96.6
GTEX-18465-0011-R6a-SM-7LG6M 50-59 years, male 96.2
GTEX-14JIY-0011-R6b-SM-68714 60-69 years, male 96.0
GTEX-13JUV-0011-R6b-SM-5LZYG 40-49 years, female 95.8
GTEX-ZVZQ-0011-R6b-SM-57WAY 60-69 years, female 95.7
GTEX-1JJEA-0011-R6a-SM-EXUS1 60-69 years, male 95.5
GTEX-1BAJH-0011-R6b-SM-7MXT2 70-79 years, male 95.2
GTEX-1GMRU-0011-R6b-SM-A9G3B 50-59 years, male 95.1
GTEX-11WQC-0011-R6a-SM-5BC77 60-69 years, male 94.7
GTEX-1MA7X-0011-R6a-SM-EYYWR 60-69 years, male 94.3
GTEX-17HHY-0011-R6b-SM-7189Z 50-59 years, male 93.7
GTEX-1J1OQ-0011-R6a-SM-ARU86 40-49 years, female 93.7
GTEX-1A3MX-0011-R6a-SM-7P8S9 60-69 years, male 93.6
GTEX-1LVAO-0011-R6b-SM-EZ6MX 60-69 years, male 93.3
GTEX-1GZ4I-0011-R6b-SM-9WG77 50-59 years, male 93.0
GTEX-T5JC-0011-R6A-SM-D3L87 20-29 years, male 92.9
GTEX-12WSE-0011-R6b-SM-5LZV5 20-29 years, male 92.5
GTEX-13QJC-0011-R6a-SM-5S2VI 60-69 years, female 92.2
GTEX-16YQH-0011-R6b-SM-7938T 30-39 years, male 92.1
GTEX-1H4P4-0011-R6a-SM-ARZLR 50-59 years, male 91.3
GTEX-14BMV-0011-R6b-SM-5YY9I 50-59 years, male 91.1
GTEX-WZTO-0011-R6B-SM-4E3J6 40-49 years, male 90.9
GTEX-11ONC-0011-R6a-SM-DO12A 60-69 years, male 90.8
GTEX-13FLW-0011-R6b-SM-5L3EN 50-59 years, male 90.7
GTEX-145LS-0011-R6b-SM-5PNWL 60-69 years, female 90.7
GTEX-ZXG5-0011-R6a-SM-57WBZ 60-69 years, male 90.7
GTEX-13RTJ-0011-R6a-SM-5SI74 60-69 years, male 90.4
GTEX-1F6IF-0011-R6a-SM-9QEIO 60-69 years, male 90.3
GTEX-1CB4G-0011-R6b-SM-9QEGO 60-69 years, male 90.1
GTEX-14LZ3-0011-R6a-SM-D3L8C 60-69 years, female 89.9
GTEX-1GTWX-0011-R6a-SM-A96RN 60-69 years, male 89.9
GTEX-1C6VR-0011-R6a-SM-7MXU8 60-69 years, male 89.7
GTEX-1OJC4-0011-R6a-SM-EXOIM 50-59 years, female 89.5
GTEX-1GN1U-0011-R6a-SM-CKZNO 50-59 years, female 89.4
GTEX-1H1DG-0011-R6a-SM-A9SK8 70-79 years, male 88.6
GTEX-S7SE-0011-R6A-SM-2XCD9 50-59 years, male 88.2
GTEX-17MF6-0011-R6b-SM-7LG6G 40-49 years, male 88.1
GTEX-1JMLX-0011-R6b-SM-EXUT9 50-59 years, male 88.1
GTEX-147GR-0011-R6b-SM-5S2RO 60-69 years, male 88.0
GTEX-1I1GV-0011-R6b-SM-ARU6Q 60-69 years, male 87.5
GTEX-1LVA9-0011-R6a-SM-EYYWH 50-59 years, male 87.5
GTEX-147F4-0011-R6b-SM-5S2UP 50-59 years, male 87.3
GTEX-145LU-0011-R6a-SM-5S2V6 50-59 years, male 86.7
GTEX-14C5O-0011-R6a-SM-5YYB6 60-69 years, male 86.4
GTEX-WWYW-0011-R6A-SM-3NB3G 50-59 years, female 86.4
GTEX-1B8L1-0011-R6b-SM-7P8SU 60-69 years, male 86.3
GTEX-Y8DK-0011-R6A-SM-4V6EG 60-69 years, male 85.6
GTEX-NPJ7-0011-R6a-SM-2I3G7 60-69 years, female 85.0
GTEX-XLM4-0011-R6A-SM-4AT4B 60-69 years, male 85.0
GTEX-13SLW-0011-R6a-SM-5O9BH 70-79 years, male 84.9
GTEX-11O72-0011-R6a-SM-DNZZQ 40-49 years, male 84.5
GTEX-1192X-0011-R6a-SM-DNZZB 50-59 years, male 84.1
GTEX-14PJM-0011-R6a-SM-6872G 50-59 years, female 84.0
GTEX-15CHQ-0011-R6b-SM-69LOX 60-69 years, male 83.9
GTEX-1IY9M-0011-R6a-SM-D4P28 60-69 years, male 82.9
GTEX-13N2G-0011-R6b-SM-5MR3P 60-69 years, male 82.3
GTEX-YJ89-0011-R6a-SM-4V6GN 60-69 years, male 82.0
GTEX-132Q8-0011-R6a-SM-5K7YN 60-69 years, male 81.6
GTEX-1IGQW-0011-R6a-SM-CM2TC 60-69 years, male 81.3
GTEX-17EVP-0011-R6b-SM-7LT99 40-49 years, male 80.7
GTEX-11NUK-0011-R6a-SM-DO93O 50-59 years, male 80.5
GTEX-14E7W-0011-R6b-SM-5ZZV3 70-79 years, male 80.4
GTEX-P44G-0011-R6A-SM-2XCD3 30-39 years, male 80.4
GTEX-TSE9-0011-R6A-SM-3DB7L 60-69 years, female 80.4
GTEX-T2IS-0011-R6A-SM-32QP2 20-29 years, female 80.2
GTEX-1HB9E-0011-R6b-SM-A9G1P 50-59 years, male 80.0
GTEX-RU72-0011-R6A-SM-2TF71 50-59 years, female 79.3
GTEX-1IKK5-0011-R6b-SM-A9SLY 60-69 years, male 79.0
GTEX-1GN73-0011-R6b-SM-CJI2T 60-69 years, male 78.8
GTEX-NL4W-0011-R6a-SM-2I3GA 50-59 years, male 78.6
GTEX-1EKGG-0011-R6a-SM-CL538 60-69 years, male 78.6
GTEX-13X6K-0011-R6a-SM-5P9K6 60-69 years, female 78.3
GTEX-15RJE-0011-R6a-SM-7DHL8 40-49 years, male 77.1
GTEX-12WSD-0011-R6b-SM-5P9JU 60-69 years, female 76.7
GTEX-WL46-0011-R6A-SM-3LK6X 50-59 years, male 76.4
GTEX-1399T-0011-R6b-SM-5K7YL 60-69 years, male 76.3
GTEX-17JCI-0011-R6a-SM-72D6D 60-69 years, female 75.5
GTEX-1ICLZ-0011-R6b-SM-A9G3A 60-69 years, male 75.5
GTEX-1LH75-0011-R6a-SM-EXURS 50-59 years, female 72.6
GTEX-15DYW-0011-R6b-SM-6PALA 60-69 years, female 72.1
GTEX-15G19-0011-R6b-SM-7KUM3 60-69 years, male 72.1
GTEX-13OVH-0011-R6b-SM-5LUAX 70-79 years, male 71.5
GTEX-QVJO-0011-R6A-SM-2S1QN 60-69 years, female 71.5
GTEX-15DCD-0011-R6b-SM-6M46L 70-79 years, female 70.5
GTEX-NPJ8-0011-R6a-SM-2HMKB 40-49 years, male 70.4
GTEX-13OW8-0011-R6b-SM-5L3I3 60-69 years, male 69.9
GTEX-1GN2E-0011-R6b-SM-9QEII 60-69 years, male 69.5
GTEX-1N2DW-0011-R6a-SM-EZ6MW 50-59 years, male 69.3
GTEX-1A8G6-0011-R6b-SM-7P8PE 60-69 years, male 68.3
GTEX-N7MT-0011-R6a-SM-2I3G3 60-69 years, female 68.1
GTEX-WVLH-0011-R6A-SM-3MJFZ 50-59 years, male 66.0
GTEX-T6MN-0011-R6A-SM-32QP8 50-59 years, male 65.7
GTEX-13FXS-0011-R6b-SM-5L3F7 50-59 years, male 65.0
GTEX-11DXW-0011-R6a-SM-DO11N 40-49 years, male 64.3
GTEX-1H1ZS-0011-R6b-SM-A9G1F 70-79 years, male 64.2
GTEX-1GZHY-0011-R6a-SM-9OSWL 50-59 years, female 63.7
GTEX-UTHO-0011-R6A-SM-3GIJW 60-69 years, male 63.6
GTEX-ZE7O-0011-R6a-SM-57WCI 50-59 years, female 63.5
GTEX-1I1GS-0011-R6b-SM-CMKHE 60-69 years, male 63.0
GTEX-1B996-0011-R6b-SM-793AQ 60-69 years, male 62.2
GTEX-183WM-0011-R6b-SM-72D66 70-79 years, female 61.9
GTEX-13JVG-0011-R6a-SM-5MR3E 60-69 years, male 61.2
GTEX-1I19N-0011-R6b-SM-CY8GC 70-79 years, male 61.2
GTEX-X4XY-0011-R6B-SM-46MVB 60-69 years, male 60.9
GTEX-1I1HK-0011-R6b-SM-CM2T9 60-69 years, male 59.1
GTEX-1F48J-0011-R6a-SM-CJI2F 50-59 years, female 58.3
GTEX-11DYG-0011-R6a-SM-DO936 60-69 years, male 57.5
GTEX-13PDP-0011-R6b-SM-5O9D5 60-69 years, male 56.4
GTEX-QVUS-0011-R6A-SM-3GACX 60-69 years, female 56.2
GTEX-139TS-0011-R6a-SM-5J2OB 60-69 years, male 55.5
GTEX-1R46S-0011-R6a-SM-EZ6N6 60-69 years, female 55.5
GTEX-1C64N-0011-R6a-SM-7IGO9 50-59 years, male 55.3
GTEX-1445S-0011-R6b-SM-5PNUF 60-69 years, male 54.2
GTEX-13N1W-0011-R6a-SM-5MR43 70-79 years, male 53.2
GTEX-1EH9U-0011-R6a-SM-CJI2C 60-69 years, male 51.3
GTEX-ZAB4-0011-R6a-SM-4SOKD 40-49 years, male 50.9
GTEX-1H3O1-0011-R6b-SM-CL54U 60-69 years, male 50.7
GTEX-1HBPM-0011-R6b-SM-ARU73 60-69 years, female 50.6
GTEX-1C6WA-0011-R6a-SM-7PBYP 60-69 years, male 50.0
GTEX-ZVT3-0011-R6a-SM-51MSU 60-69 years, female 49.8
GTEX-QMR6-0011-R6A-SM-32PKP 50-59 years, male 48.3
GTEX-1IL2U-0011-R6a-SM-ARZLG 60-69 years, male 47.4
GTEX-11GSP-0011-R6b-SM-57WBQ 60-69 years, female 47.2
GTEX-ZV68-0011-R6a-SM-51MSR 50-59 years, female 46.8
GTEX-S7PM-0011-R6A-SM-3NM8F 60-69 years, male 45.7
GTEX-OHPN-0011-R6A-SM-2I5FH 60-69 years, female 44.3
GTEX-1EWIQ-0011-R6a-SM-ARU8G 70-79 years, female 44.1
GTEX-1LB8K-0011-R6a-SM-EXURT 50-59 years, male 43.6
GTEX-X261-0011-R6B-SM-4E3J8 50-59 years, male 40.7
GTEX-13PL6-0011-R6a-SM-5O9C5 40-49 years, female 40.2
GTEX-1EN7A-0011-R6b-SM-9QEHW 40-49 years, male 40.1
GTEX-14753-0011-R6b-SM-5S2UD 60-69 years, male 39.7
GTEX-1IKOH-0011-R6b-SM-A9G1W 60-69 years, female 38.1
GTEX-13OVJ-0011-R6b-SM-5L3GH 50-59 years, female 37.8
GTEX-1LC47-0011-R6b-SM-EZ6MI 60-69 years, male 36.3
GTEX-12584-0011-R6a-SM-5NQ7C 40-49 years, male 36.1
GTEX-15EO6-0011-R6a-SM-7KULK 50-59 years, male 35.3
GTEX-ZF28-0011-R6a-SM-4WKHI 60-69 years, male 34.5
GTEX-1F75B-0011-R6a-SM-ARZMI 50-59 years, male 34.3
GTEX-1H23P-0011-R6b-SM-A9G1H 60-69 years, male 34.3
GTEX-16Z82-0011-R6a-SM-7IGLV 60-69 years, male 34.0
GTEX-1H3VE-0011-R6b-SM-A9G1M 40-49 years, male 33.9
GTEX-131XW-0011-R6b-SM-5K7XY 50-59 years, female 31.0
GTEX-14PHW-0011-R6b-SM-5YYAR 60-69 years, female 29.9
GTEX-16XZZ-0011-R6a-SM-7IGNE 60-69 years, male 29.6
GTEX-1CB4H-0011-R6b-SM-CKZNK 60-69 years, female 29.1
GTEX-YFC4-0011-R6b-SM-4V6E1 40-49 years, female 28.7
GTEX-13OW5-0011-R6b-SM-5O9BW 60-69 years, male 28.1
GTEX-1E2YA-0011-R6b-SM-CE6R2 50-59 years, male 25.6
GTEX-QDT8-0011-R6A-SM-32PKI 30-39 years, female 24.8
GTEX-145MI-0011-R6a-SM-5PNZA 60-69 years, female 23.1
GTEX-PWO3-0011-R6A-SM-2I5F3 60-69 years, female 21.1
GTEX-ZUA1-0011-R6b-SM-4YCDD 40-49 years, male 20.7
GTEX-X4EP-0011-R6A-SM-3P629 60-69 years, female 18.4
GTEX-1RLM8-0011-R6a-SM-EYYXS 50-59 years, male 12.4
GTEX-P44H-0011-R6A-SM-2XCF3 40-49 years, male 10.6
GTEX-1HFI6-0011-R6b-SM-CM2SR 40-49 years, male 9.5
GTEX-1CB4J-0011-R6b-SM-9WG7B 60-69 years, male 6.9
Show allShow less
Brain - Putamen (basal ganglia)
Average nTPM: 73.8
Samples: 205

Max nTPM: 166.3
Min nTPM: 7.5
Std nTPM: 35.7
Median nTPM: 76.2
GTEX-WL46-0011-R7A-SM-3LK7X 50-59 years, male 166.3
GTEX-12WSI-0011-R7b-SM-5GU78 50-59 years, male 153.4
GTEX-WHSE-0011-R7A-SM-3P5YZ 20-29 years, male 152.6
GTEX-11DYG-0011-R7b-SM-EXUS6 60-69 years, male 145.2
GTEX-12ZZW-0011-R7a-SM-5DUWC 50-59 years, male 145.0
GTEX-1H3O1-0011-R7a-SM-CE6SJ 60-69 years, male 143.3
GTEX-13G51-0011-R7b-SM-5LZXG 60-69 years, male 142.2
GTEX-T5JC-0011-R7A-SM-32PME 20-29 years, male 140.6
GTEX-Z93S-0011-R7b-SM-4RGNK 50-59 years, male 139.2
GTEX-139TT-0011-R7b-SM-5J2MN 60-69 years, male 137.5
GTEX-16YQH-0011-R7a-SM-79ON1 30-39 years, male 132.5
GTEX-1HT8W-0011-R7b-SM-CMKH8 30-39 years, male 130.6
GTEX-13O3Q-0011-R7a-SM-5KM38 50-59 years, male 130.3
GTEX-11PRG-0011-R7a-SM-DNZZT 50-59 years, male 129.9
GTEX-1J8Q2-0011-R7a-SM-CKZPF 60-69 years, male 129.6
GTEX-11DZ1-0011-R7a-SM-DNZZH 50-59 years, male 129.2
GTEX-11OF3-0011-R7a-SM-57WCG 60-69 years, male 128.6
GTEX-11NV4-0011-R7a-SM-57WDH 60-69 years, male 126.0
GTEX-S7SE-0011-R7A-SM-2XCDI 50-59 years, male 125.4
GTEX-P44G-0011-R7A-SM-2I3F9 30-39 years, male 123.9
GTEX-145MH-0011-R7a-SM-5PNWH 50-59 years, male 122.0
GTEX-12WSM-0011-R7b-SM-5EGLD 60-69 years, male 119.7
GTEX-1313W-0011-R7b-SM-5DUWL 50-59 years, female 118.4
GTEX-1HCVE-0011-R7b-SM-A9G1I 50-59 years, male 118.1
GTEX-13O3O-0011-R7b-SM-5P9GZ 60-69 years, female 118.0
GTEX-13N1W-0011-R7b-SM-5MR4F 70-79 years, male 117.6
GTEX-12ZZZ-0011-R7b-SM-5EGLE 60-69 years, male 117.3
GTEX-12WSC-0011-R7b-SM-5LU9L 50-59 years, male 114.5
GTEX-1AX9I-0011-R7b-SM-7P8Q3 60-69 years, male 114.5
GTEX-1IY9M-0011-R7a-SM-D4P49 60-69 years, male 114.4
GTEX-1B933-0011-R7a-SM-7DUGX 50-59 years, female 113.5
GTEX-R55E-0011-R7A-SM-2TC5Z 20-29 years, male 113.1
GTEX-1IDJH-0011-R7a-SM-A9SM1 70-79 years, male 113.1
GTEX-13FHO-0011-R7b-SM-5LZXD 60-69 years, male 109.6
GTEX-14PN4-0011-R7b-SM-69LQQ 50-59 years, male 109.6
GTEX-16Z82-0011-R7a-SM-7MKGJ 60-69 years, male 109.3
GTEX-1I1GQ-0011-R7a-SM-CJI41 50-59 years, male 108.1
GTEX-1F75A-0011-R7b-SM-9QEHE 50-59 years, male 107.6
GTEX-17EVP-0011-R7a-SM-7LTAN 40-49 years, male 107.3
GTEX-14C5O-0011-R7b-SM-5YYAH 60-69 years, male 105.9
GTEX-RNOR-0011-R7A-SM-2TF4V 50-59 years, female 105.5
GTEX-12WSA-0011-R7b-SM-5GU5U 60-69 years, male 104.2
GTEX-1B8L1-0011-R7b-SM-9OSVK 60-69 years, male 103.6
GTEX-1GF9W-0011-R7b-SM-9QEIF 60-69 years, male 100.5
GTEX-13X6J-0011-R7b-SM-5PNUC 50-59 years, male 100.4
GTEX-14ASI-0011-R7b-SM-5YY9G 60-69 years, male 99.8
GTEX-1HGF4-0011-R7a-SM-A96S2 60-69 years, male 98.9
GTEX-YJ89-0011-R7a-SM-4V6GO 60-69 years, male 98.7
GTEX-13RTJ-0011-R7b-SM-5P9JS 60-69 years, male 97.3
GTEX-11ONC-0011-R7b-SM-DO93J 60-69 years, male 97.2
GTEX-13S7M-0011-R7a-SM-5O9DK 60-69 years, female 97.1
GTEX-1C6WA-0011-R7b-SM-7P8S8 60-69 years, male 97.1
GTEX-N7MS-0011-R7a-SM-2HMKN 60-69 years, male 96.1
GTEX-1LVAO-0011-R7a-SM-EYYWZ 60-69 years, male 96.1
GTEX-145MG-0011-R7b-SM-5P9JY 50-59 years, male 95.2
GTEX-11DXY-0011-R7a-SM-DO11L 60-69 years, male 95.2
GTEX-11GSP-0011-R7b-SM-57WC3 60-69 years, female 95.0
GTEX-1GTWX-0011-R7a-SM-A96RO 60-69 years, male 94.6
GTEX-XLM4-0011-R7A-SM-4AT5L 60-69 years, male 94.1
GTEX-13OW6-0011-R7b-SM-5L3H4 50-59 years, male 93.9
GTEX-1GN73-0011-R7a-SM-CJI2U 60-69 years, male 93.7
GTEX-14ABY-0011-R7b-SM-5PNWS 50-59 years, male 93.1
GTEX-145LS-0011-R7a-SM-5PNWM 60-69 years, female 90.9
GTEX-N7MT-0011-R7a-SM-2I3FZ 60-69 years, female 90.7
GTEX-RU72-0011-R7A-SM-2TF5U 50-59 years, female 90.3
GTEX-ZE9C-0011-R7a-SM-4WWCX 60-69 years, male 90.3
GTEX-1ICLZ-0011-R7a-SM-ARZLU 60-69 years, male 90.0
GTEX-ZAB4-0011-R7a-SM-4SOKE 40-49 years, male 89.5
GTEX-13X6I-0011-R7b-SM-5PNWP 60-69 years, male 89.0
GTEX-12WSD-0011-R7b-SM-5PNWE 60-69 years, female 88.9
GTEX-15CHQ-0011-R7b-SM-D4P1Q 60-69 years, male 88.5
GTEX-T6MN-0011-R7A-SM-32QP5 50-59 years, male 88.0
GTEX-131YS-0011-R7a-SM-5IJDA 60-69 years, female 87.2
GTEX-14BIN-0011-R7b-SM-5S2RI 50-59 years, female 87.1
GTEX-ZDXO-0011-R7a-SM-4WWCU 60-69 years, male 87.0
GTEX-QVJO-0011-R7A-SM-2S1QO 60-69 years, female 86.9
GTEX-1HFI6-0011-R7b-SM-CM2SS 40-49 years, male 86.8
GTEX-11TTK-0011-R7b-SM-DNZZZ 60-69 years, female 86.7
GTEX-1EMGI-0011-R7b-SM-9QEH5 60-69 years, male 86.6
GTEX-13112-0011-R7b-SM-5DUVW 50-59 years, male 86.5
GTEX-15ER7-0011-R7a-SM-6M46N 20-29 years, female 86.5
GTEX-1IOXB-0011-R7b-SM-CE6SM 50-59 years, male 86.2
GTEX-17F97-0011-R7b-SM-7MGVY 50-59 years, male 85.3
GTEX-11NUK-0011-R7a-SM-DO93P 50-59 years, male 85.2
GTEX-1IKK5-0011-R7b-SM-A9G39 60-69 years, male 85.1
GTEX-ZUA1-0011-R7b-SM-4YCDP 40-49 years, male 84.7
GTEX-1H3NZ-0011-R7a-SM-A9SKD 60-69 years, male 84.2
GTEX-12ZZY-0011-R7a-SM-5EGLB 60-69 years, male 83.9
GTEX-1LH75-0011-R7a-SM-EXOIF 50-59 years, female 83.4
GTEX-1IKJJ-0011-R7a-SM-ARZLH 60-69 years, male 82.9
GTEX-12WSF-0011-R7b-SM-5HL99 70-79 years, male 81.6
GTEX-WZTO-0011-R7B-SM-4E3IS 40-49 years, male 81.6
GTEX-1EKGG-0011-R7a-SM-CKZNN 60-69 years, male 80.5
GTEX-14PJM-0011-R7a-SM-6AJBX 50-59 years, female 80.0
GTEX-13FLV-0011-R7b-SM-5K7WW 50-59 years, male 79.7
GTEX-Q2AG-0011-R7A-SM-2HMJP 40-49 years, female 79.7
GTEX-18464-0011-R7b-SM-731CM 50-59 years, male 79.1
GTEX-1H1DG-0011-R7b-SM-A96RR 70-79 years, male 78.5
GTEX-1GF9V-0011-R7a-SM-CJI2R 60-69 years, male 77.8
GTEX-144GL-0011-R7b-SM-5P9HX 50-59 years, male 77.2
GTEX-13FLW-0011-R7b-SM-5L3EZ 50-59 years, male 76.7
GTEX-OHPN-0011-R7A-SM-2I5FI 60-69 years, female 76.4
GTEX-13JUV-0011-R7b-SM-5LZZG 40-49 years, female 76.2
GTEX-1JJ6O-0011-R7b-SM-EXUTB 60-69 years, male 75.7
GTEX-13VXU-0011-R7b-SM-5SI72 50-59 years, male 75.1
GTEX-14PJO-0011-R7a-SM-664NR 60-69 years, male 74.8
GTEX-1B8SF-0011-R7b-SM-9OSVM 60-69 years, male 73.6
GTEX-11DXW-0011-R7b-SM-DO119 40-49 years, male 73.1
GTEX-1CB4G-0011-R7b-SM-9QEGP 60-69 years, male 72.4
GTEX-13FHP-0011-R7b-SM-5LZYI 50-59 years, male 71.5
GTEX-1JMQK-0011-R7b-SM-EXUTF 60-69 years, male 71.3
GTEX-12ZZX-0011-R7b-SM-5DUVV 40-49 years, female 70.1
GTEX-1HB9E-0011-R7b-SM-A9G1Q 50-59 years, male 70.1
GTEX-132Q8-0011-R7b-SM-5N9F1 60-69 years, male 69.6
GTEX-YFC4-0011-R7b-SM-4V6E2 40-49 years, female 68.2
GTEX-1A3MX-0011-R7a-SM-7DUEM 60-69 years, male 68.0
GTEX-1GZ4I-0011-R7b-SM-ARU71 50-59 years, male 67.8
GTEX-1MJK2-0011-R7a-SM-EXUS4 50-59 years, male 67.6
GTEX-1B996-0011-R7b-SM-7IGNT 60-69 years, male 67.5
GTEX-13NYB-0011-R7a-SM-5MR5D 40-49 years, male 66.8
GTEX-15RJE-0011-R7a-SM-7DHL9 40-49 years, male 65.7
GTEX-17HG3-0011-R7b-SM-7EPGR 30-39 years, female 65.5
GTEX-13X6K-0011-R7b-SM-5P9K7 60-69 years, female 65.2
GTEX-Y8DK-0011-R7A-SM-4SOJZ 60-69 years, male 65.2
GTEX-ZE7O-0011-R7a-SM-57WCU 50-59 years, female 65.1
GTEX-1F75W-0011-R7a-SM-9QEI6 60-69 years, male 64.8
GTEX-13JVG-0011-R7b-SM-5MR3Q 60-69 years, male 62.6
GTEX-147GR-0011-R7a-SM-5S2RP 60-69 years, male 62.6
GTEX-13FXS-0011-R7a-SM-5L3FC 50-59 years, male 62.4
GTEX-1J1OQ-0011-R7b-SM-ARU87 40-49 years, female 61.1
GTEX-18465-0011-R7b-SM-7LG6V 50-59 years, male 60.8
GTEX-WWYW-0011-R7A-SM-3NB3H 50-59 years, female 58.4
GTEX-TSE9-0011-R7A-SM-3DB7P 60-69 years, female 57.7
GTEX-15DCD-0011-R7b-SM-6LPID 70-79 years, female 57.0
GTEX-13OW5-0011-R7a-SM-5O9C9 60-69 years, male 56.6
GTEX-1GN2E-0011-R7b-SM-9QEIJ 60-69 years, male 56.3
GTEX-1192X-0011-R7b-SM-DNZZC 50-59 years, male 55.7
GTEX-1EX96-0011-R7a-SM-9OSVW 50-59 years, male 55.3
GTEX-11WQC-0011-R7b-SM-5BC7A 60-69 years, male 54.0
GTEX-144GO-0011-R7b-SM-5S2TT 60-69 years, male 53.9
GTEX-14E7W-0011-R7b-SM-5ZZV4 70-79 years, male 53.5
GTEX-1OJC4-0011-R7a-SM-EYYX4 50-59 years, female 53.4
GTEX-1445S-0011-R7b-SM-5PNUG 60-69 years, male 52.8
GTEX-12WSE-0011-R7a-SM-5PNWF 20-29 years, male 50.9
GTEX-1H1ZS-0011-R7a-SM-CL54P 70-79 years, male 50.5
GTEX-15DYW-0011-R7a-SM-7KULG 60-69 years, female 49.6
GTEX-13PVQ-0011-R7a-SM-5L3G3 50-59 years, male 49.4
GTEX-15EO6-0011-R7a-SM-6M46Q 50-59 years, male 48.1
GTEX-1F52S-0011-R7b-SM-9QEH8 60-69 years, female 47.7
GTEX-NPJ7-0011-R7a-SM-EV79B 60-69 years, female 47.7
GTEX-WVLH-0011-R7A-SM-3MJFB 50-59 years, male 46.4
GTEX-13OW8-0011-R7a-SM-5L3FP 60-69 years, male 46.3
GTEX-QDT8-0011-R7A-SM-32PKF 30-39 years, female 46.0
GTEX-13CZV-0011-R7b-SM-5LZXH 60-69 years, male 45.6
GTEX-1GMR8-0011-R7b-SM-CJI2I 50-59 years, female 45.1
GTEX-14JG1-0011-R7b-SM-5YYAV 40-49 years, male 44.7
GTEX-1E1VI-0011-R7b-SM-9QEGR 50-59 years, male 43.0
GTEX-1LSNL-0011-R7a-SM-EYYWI 50-59 years, male 42.1
GTEX-1I1GV-0011-R7a-SM-ARU6R 60-69 years, male 42.0
GTEX-1GMRU-0011-R7b-SM-A96TJ 50-59 years, male 41.2
GTEX-17HHY-0011-R7a-SM-718A1 50-59 years, male 40.8
GTEX-17EVQ-0011-R7a-SM-7EWDA 70-79 years, male 40.2
GTEX-ZXG5-0011-R7b-SM-57WCC 60-69 years, male 40.2
GTEX-NL3H-0011-R7a-SM-2I3G5 60-69 years, male 39.8
GTEX-NPJ8-0011-R7a-SM-2HMJV 40-49 years, male 39.4
GTEX-ZF28-0011-R7a-SM-4WKF5 60-69 years, male 39.3
GTEX-1H1CY-0011-R7a-SM-CJI32 60-69 years, female 38.8
GTEX-183WM-0011-R7b-SM-731AX 70-79 years, female 37.4
GTEX-1IKOH-0011-R7b-SM-CKZPH 60-69 years, female 36.8
GTEX-14BMV-0011-R7b-SM-5YY9J 50-59 years, male 36.1
GTEX-1I1GS-0011-R7a-SM-CM2T6 60-69 years, male 35.8
GTEX-ZVZQ-0011-R7b-SM-57WBB 60-69 years, female 34.3
GTEX-139TS-0011-R7a-SM-5K7X7 60-69 years, male 30.2
GTEX-1EU9M-0011-R7b-SM-9OSVU 60-69 years, male 29.3
GTEX-1R46S-0011-R7b-SM-EXUTH 60-69 years, female 29.3
GTEX-13CF2-0011-R7b-SM-5K7UV 60-69 years, male 29.1
GTEX-1F48J-0011-R7a-SM-CJI2G 50-59 years, female 28.9
GTEX-1H4P4-0011-R7b-SM-ARU77 50-59 years, male 28.8
GTEX-X261-0011-R7A-SM-4E3JJ 50-59 years, male 27.8
GTEX-1H23P-0011-R7b-SM-CKZP2 60-69 years, male 27.4
GTEX-ZV68-0011-R7a-SM-51MT4 50-59 years, female 26.9
GTEX-ZVT3-0011-R7a-SM-57WCO 60-69 years, female 26.0
GTEX-1GZ2Q-0011-R7b-SM-9OSWN 40-49 years, male 25.9
GTEX-1I1CD-0011-R7a-SM-CMKHA 60-69 years, female 25.0
GTEX-QMR6-0011-R7A-SM-32PKL 50-59 years, male 24.9
GTEX-13OVL-0011-R7a-SM-5P9GW 50-59 years, male 24.7
GTEX-13QJC-0011-R7b-SM-5PNUM 60-69 years, female 23.7
GTEX-14LZ3-0011-R7a-SM-69LQN 60-69 years, female 23.2
GTEX-1EN7A-0011-R7b-SM-9QEHX 40-49 years, male 22.1
GTEX-1HCU6-0011-R7b-SM-ARL77 60-69 years, female 21.8
GTEX-1CB4H-0011-R7b-SM-CJI27 60-69 years, female 21.5
GTEX-1MA7X-0011-R7b-SM-EYYWS 60-69 years, male 21.1
GTEX-1LVA9-0011-R7a-SM-EYYWG 50-59 years, male 18.6
GTEX-17HII-0011-R7a-SM-79OMS 50-59 years, male 17.0
GTEX-1C64N-0011-R7a-SM-7IGOI 50-59 years, male 16.6
GTEX-15G19-0011-R7b-SM-6M479 60-69 years, male 16.4
GTEX-17MF6-0011-R7b-SM-7LG6J 40-49 years, male 14.8
GTEX-1EH9U-0011-R7a-SM-9QEGU 60-69 years, male 14.8
GTEX-1A8G6-0011-R7b-SM-7MXTV 60-69 years, male 13.6
GTEX-1F6I4-0011-R7a-SM-CJI24 60-69 years, male 13.5
GTEX-1H3VE-0011-R7b-SM-CE6S9 40-49 years, male 10.8
GTEX-13OVJ-0011-R7a-SM-5L3G1 50-59 years, female 10.5
GTEX-13N2G-0011-R7a-SM-5MR42 60-69 years, male 10.1
GTEX-1F75B-0011-R7a-SM-ARU84 50-59 years, male 7.9
GTEX-1E2YA-0011-R7a-SM-CJI1Z 50-59 years, male 7.5
Show allShow less

BASAL GANGLIA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 65.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 65.0
FF:10164-103B2 76 years, female 65.0
Globus pallidus
Scaled Tags Per Million: 19.0
FF:10175-103C4 60 years, female 26.0
FF:10161-103A8 76 years, female 12.1
Nucleus accumbens
Scaled Tags Per Million: 47.9
FF:10037-101F1 23-56 years, mixed 47.9
Putamen
Scaled Tags Per Million: 49.5
FF:10176-103C5 60 years, female 49.5

BASAL GANGLIA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 74.0
Mouse sample Sample description nTPM
Caudate putamen
nTPM: 74.0
Samples: 4

Max nTPM: 99.1
Min nTPM: 55.7
Sample A Male 77.5
Sample B Male 99.1
Sample C Female 55.7
Sample D Female 63.8
Septum
nTPM: 36.7
Samples: 4

Max nTPM: 49.0
Min nTPM: 31.7
Sample A Male 49.0
Sample B Male 32.4
Sample C Female 31.7
Sample D Female 33.8
Ventral forebrain
nTPM: 60.5
Samples: 4

Max nTPM: 70.5
Min nTPM: 50.6
Sample A Male 70.5
Sample B Male 54.6
Sample C Female 66.2
Sample D Female 50.6

BASAL GANGLIA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Read more
Max Expression energy 4.2
Allen experiment id Experiment description Expression energy
Striatum
Expression energy: 4.2
69735670 Antisense, RP_050503_03_C06, Mouse strain C57BL/6J (56 days, male) 4.2
Pallidum
Expression energy: 2.9
69735670 Antisense, RP_050503_03_C06, Mouse strain C57BL/6J (56 days, male) 2.9

Contact

  • NEWS ARTICLES
  • PRESS ROOM
  • contact@proteinatlas.org

The Project

  • INTRODUCTION
  • ORGANIZATION
  • PUBLICATIONS

The Human Protein Atlas

  • DOWNLOADABLE DATA
  • LICENCE & CITATION
  • HELP & FAQ
The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.