HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:282.2 nTPM
HPA:282.2 nTPM
GTEx:828.4 nTPM
FANTOM5:1079.4 Scaled Tags Per Million
Pig:2490.2 nTPM
Mouse:641.9 nTPM
Allen mouse:32.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA038171Antibody CAB006908
Glial cells MediumNot detected
Neuronal cells HighMedium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 282.2
Sample id Sample description nTPM
Hippocampus
nTPM: 0.0
1855 Male, age 76, left hemisphere 0.0
1898 Male, age 80, left hemisphere 0.0
1911 Female, age 85, right hemisphere 0.0
2148 Female, age 91, left hemisphere 0.0
2529 Female, age 94, left hemisphere 0.0
2621 Female, age 67, right hemisphere 0.0
Dentate gyrus
nTPM: 0.0
1927 Female, age 91, both hemispheres 0.0
2010 Male, age 76, both hemispheres 0.0
2246 Female, age 85, both hemispheres 0.0
2528 Male, age 74, both hemispheres 0.0
2530 Female, age 94, left hemisphere 0.0
2531 Female, age 67, both hemispheres 0.0
Entorhinal gyrus
nTPM: 181.1
2613 Female, age 94, left hemisphere 483.6
2764 Male, age 80, right hemisphere 240.8
1938 Female, age 85, left hemisphere 176.9
2686 Male, age 75, right hemisphere 150.2
1787 Male, age 76, left hemisphere 35.1
2117 Female, age 91, right hemisphere 0.0
Hippocampus, CA1
nTPM: 23.8
2749 Male, age 80, left hemisphere 119.4
1873 Female, age 85, both hemispheres 0.0
2045 Male, age 76, both hemispheres 0.0
2082 Female, age 91, right hemisphere 0.0
2527 Male, age 74, both hemispheres 0.0
Hippocampus, CA2
nTPM: 9.6
1940 Female, age 85, left hemisphere 57.7
1892 Male, age 76, both hemispheres 0.0
1963 Male, age 80, left hemisphere 0.0
2113 Female, age 91, right hemisphere 0.0
2249 Male, age 74, both hemispheres 0.0
2437 Female, age 94, left hemisphere 0.0
Hippocampus, CA3
nTPM: 52.7
2620 Female, age 94, left hemisphere 211.3
2861 Female, age 67, both hemispheres 78.6
2137 Male, age 80, left hemisphere 26.6
1867 Male, age 76, both hemispheres 0.0
1891 Female, age 85, both hemispheres 0.0
2436 Male, age 74, both hemispheres 0.0
Parahippocampal cortex
nTPM: 158.7
2622 Female, age 67, right hemisphere 402.9
1850 Male, age 80, both hemispheres 361.5
2532 Female, age 72, left hemisphere 332.8
2693 Female, age 94, both hemispheres 207.0
1933 Female, age 85, both hemispheres 153.6
2245 Female, age 91, both hemispheres 129.7
1990 Female, age 91, right hemisphere 0.0
2018 Male, age 76, both hemispheres 0.0
2250 Female, age 67, right hemisphere 0.0
2692 Male, age 74, both hemispheres 0.0
Perirhinal gyrus
nTPM: 282.2
1794 Male, age 80, right hemisphere 496.6
1841 Female, age 85, right hemisphere 405.3
2848 Male, age 76, right hemisphere 347.2
1847 Female, age 91, left hemisphere 162.2
2521 Female, age 94, right hemisphere 0.0
Subiculum
nTPM: 0.0
1901 Male, age 80, both hemispheres 0.0
1977 Female, age 85, both hemispheres 0.0
2042 Male, age 76, both hemispheres 0.0
2438 Female, age 94, left hemisphere 0.0
2619 Male, age 74, both hemispheres 0.0
2729 Female, age 91, right hemisphere 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 828.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 828.4
Samples: 197

Max nTPM: 3416.9
Min nTPM: 47.3
Std nTPM: 606.2
Median nTPM: 695.1
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 3416.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 2698.9
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 2674.9
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 2603.8
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 2481.1
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 2446.1
GTEX-Y8DK-0011-R1A-SM-4RGLO 60-69 years, male 2148.2
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 2132.8
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 2101.7
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 2044.4
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 2020.8
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 1079.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 1079.4
FF:10169-103B7 60 years, female 1125.8
FF:10153-102I9 76 years, female 1033.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 2490.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 1850.8
Samples: 4

Max nTPM: 2589.1
Min nTPM: 1057.4
Sample A Female 2589.1
Sample B Female 2266.5
Sample C Male 1057.4
Sample D Male 1490.0
Entorhinal cortex
nTPM: 2490.2
Samples: 4

Max nTPM: 4576.8
Min nTPM: 1387.5
Sample A Female 1928.9
Sample B Female 4576.8
Sample C Male 2067.7
Sample D Male 1387.5
Subiculum
nTPM: 795.3
Samples: 4

Max nTPM: 1362.9
Min nTPM: 575.3
Sample A Female 1362.9
Sample B Female 607.5
Sample C Male 575.3
Sample D Male 635.3
Ventral hippocampus
nTPM: 1519.1
Samples: 4

Max nTPM: 1824.3
Min nTPM: 1239.6
Sample A Female 1824.3
Sample B Female 1317.5
Sample C Male 1239.6
Sample D Male 1694.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 641.9
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 585.3
Samples: 4

Max nTPM: 767.5
Min nTPM: 446.2
Sample A Male 662.8
Sample B Male 767.5
Sample C Female 464.6
Sample D Female 446.2
Hippocampal formation
nTPM: 641.9
Samples: 4

Max nTPM: 711.2
Min nTPM: 545.3
Sample A Male 545.3
Sample B Male 711.2
Sample C Female 692.2
Sample D Female 618.8

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 32.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 32.2
69153790 Antisense, RP_050330_01_A03, Mouse strain C57BL/6J (56 days, male) 32.2
69153759 Antisense, RP_050330_01_A03, Mouse strain C57BL/6J (56 days, male) 28.5
737 Antisense, RP_050330_01_A03, Mouse strain C57BL/6J (56 days, male) 12.6
736 Antisense, RP_050330_01_A03, Mouse strain C57BL/6J (56 days, male) 7.3

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The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.