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UCHL1
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:315.6 nTPM
FANTOM5:751.9 Scaled Tags Per Million
Pig:476.3 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA005993Antibody CAB002580
Glial cells LowNot detected
Neuronal cells -High




CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 315.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 315.6
Samples: 246

Max nTPM: 1175.7
Min nTPM: 17.2
Std nTPM: 239.3
Median nTPM: 266.9
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 1175.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 911.0
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 884.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 863.2
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 862.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 847.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 820.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 814.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 805.2
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 780.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 746.6
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 744.6
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 741.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 734.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 734.0
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 729.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 721.2
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 720.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 712.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 712.5
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 708.1
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 705.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 702.6
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 701.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 697.0
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 687.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 686.7
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 670.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 668.3
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 668.0
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 665.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 657.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 645.3
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 628.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 623.3
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 613.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 611.7
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 610.2
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 609.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 604.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 598.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 594.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 555.1
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 552.0
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 551.5
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 549.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 549.1
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 548.7
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 544.0
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 543.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 529.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 526.7
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 518.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 512.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 506.2
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 492.2
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 479.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 465.6
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 465.0
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 464.2
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 461.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 453.8
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 453.1
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 450.9
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 449.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 442.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 442.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 436.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 436.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 433.0
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 431.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 430.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 425.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 419.0
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 418.9
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 418.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 417.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 416.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 414.1
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 407.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 406.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 405.5
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 405.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 400.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 397.4
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 396.8
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 395.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 390.0
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 379.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 378.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 377.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 376.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 375.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 374.2
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 362.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 362.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 361.9
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 351.5
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 349.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 347.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 345.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 345.1
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 344.6
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 340.5
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 334.0
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 332.4
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 331.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 319.5
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 318.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 313.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 312.7
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 309.2
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 308.8
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 303.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 298.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 297.1
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 295.5
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 291.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 280.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 280.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 279.4
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 278.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 268.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 264.9
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 264.6
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 262.4
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 262.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 260.4
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 260.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 250.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 249.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 249.0
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 241.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 240.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 231.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 228.3
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 225.8
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 222.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 216.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 214.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 212.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 212.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 209.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 208.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 200.0
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 195.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 195.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 184.4
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 184.4
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 182.6
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 179.7
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 171.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 169.8
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 169.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 168.8
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 166.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 163.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 163.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 156.8
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 155.2
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 153.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 151.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 146.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 142.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 140.3
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 135.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 131.1
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 125.8
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 123.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 122.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 122.0
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 120.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 118.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 117.2
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 116.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 114.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 113.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 111.4
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 110.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 108.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 108.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 106.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 106.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 105.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 104.2
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 103.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 103.3
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 100.4
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 97.3
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 96.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 94.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 92.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 91.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 90.8
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 88.6
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 88.0
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 87.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 86.3
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 86.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 85.0
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 82.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 80.0
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 78.6
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 75.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 74.6
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 72.8
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 72.8
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 71.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 70.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 69.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 66.8
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 61.3
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 61.1
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 61.0
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 59.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 57.2
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 54.6
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 54.1
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 51.2
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 49.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 49.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 48.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 47.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 46.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 43.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 43.6
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 42.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 42.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 41.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 40.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 40.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 40.4
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 39.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 38.6
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 35.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 34.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 33.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 30.5
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 29.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 27.0
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 24.1
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 23.8
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 22.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 18.2
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 17.9
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 17.2
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 751.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 751.9
FF:10164-103B2 76 years, female 751.9

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 476.3
Pig sample Sample description nTPM
Caudate
nTPM: 476.3
Samples: 4

Max nTPM: 547.5
Min nTPM: 421.1
Sample A Female 421.1
Sample B Female 491.1
Sample C Male 547.5
Sample D Male 445.5

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