PONS AND MEDULLA - Expression summary
Mouse brain, Intensity
Ponsi 		101.197
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:446.7 nTPM
HPA:446.7 nTPM
FANTOM5:2171.6 Scaled Tags Per Million
Pig:728.1 nTPM
Mouse:531.8 nTPM
Allen mouse:17.8 Expression energy

PONS - Mouse brain profilei , antibody CAB079024
Pons mean intensity 101.197
intensityi
FRONT BACK
Barrington's nucleus -
Koelliker-fuse nucleus -
Motor tregiminal nucleus 29.125
Parabrachial nucleus 48.493
Principle sensory trigeminal nucleus 25.449
Locus coeruleus 85.339
Pontine nucleus 49.496
Vestibular nucleus 41.764
Pontine reticular nucleus, oral 19.137
Lateral lemniscus 9.695
Superior paraolivary nucleus 32.212

PONS AND MEDULLA - HPA Brain RNA-seq
Max nTPM 446.7
Sample id Sample description nTPM
Anterior cochlear nucleus, ventral
nTPM: 34.6
2188 Female, age 91, both hemispheres 53.8
1984 Male, age 76, both hemispheres 38.4
2301 Female, age 85, both hemispheres 29.3
2090 Male, age 80, both hemispheres 16.8
Area postrema
nTPM: 12.1
2054 Male, age 76, both hemispheres 36.5
2306 Male, age 80, both hemispheres 0.0
2799 Male, age 61, both hemispheres 0.0
Cuneate nuclei
nTPM: 49.4
2131 Male, age 76, both hemispheres 127.3
2376 Male, age 61, both hemispheres 20.8
2381 Male, age 80, both hemispheres 0.0
Dorsal cochlear nucleus
nTPM: 41.3
2187 Female, age 91, both hemispheres 97.9
2058 Male, age 76, both hemispheres 86.6
2370 Male, age 61, both hemispheres 22.2
2378 Male, age 80, both hemispheres 0.0
2802 Male, age 74, right hemisphere 0.0
Dorsal medullary reticular nucleus
nTPM: 117.8
2040 Female, age 85, both hemispheres 291.3
2088 Male, age 76, both hemispheres 44.6
2373 Male, age 61, both hemispheres 17.7
Dorsal motor vagal complex
nTPM: 109.5
2133 Female, age 91, both hemispheres 320.1
2844 Male, age 55, unknown 248.9
2000 Male, age 74, unknown 234.8
2813 Female, age 72, unknown 71.9
2185 Male, age 76, both hemispheres 0.0
2643 Male, age 74, both hemispheres 0.0
2797 Male, age 61, both hemispheres 0.0
2807 Female, age 85, both hemispheres 0.0
Dorsal tegmental nucleus
nTPM: 55.1
2083 Male, age 80, both hemispheres 111.4
2326 Male, age 74, both hemispheres 54.6
1936 Male, age 76, left hemisphere 54.5
2358 Male, age 61, both hemispheres 0.0
Dorsolateral tegmental area
nTPM: 90.0
2360 Male, age 74, both hemispheres 164.2
2654 Male, age 80, both hemispheres 107.3
2751 Female, age 85, both hemispheres 103.8
2141 Male, age 76, both hemispheres 74.9
2337 Male, age 61, both hemispheres 0.0
Gigantocellular reticular nuclei, medullary
nTPM: 94.5
2462 Male, age 74, both hemispheres 310.2
1876 Female, age 85, both hemispheres 109.8
2310 Male, age 80, both hemispheres 77.2
2022 Male, age 76, right hemisphere 51.3
2387 Female, age 91, both hemispheres 18.8
2314 Male, age 61, both hemispheres 0.0
Gigantocellular reticular nuclei, pars
nTPM: 105.9
2168 Male, age 76, both hemispheres 236.1
2084 Female, age 85, both hemispheres 200.2
2336 Male, age 61, both hemispheres 65.4
2706 Male, age 80, both hemispheres 19.3
2330 Male, age 80, both hemispheres 8.3
Inferior olive
nTPM: 0.0
2085 Female, age 85, both hemispheres 0.0
2178 Male, age 61, both hemispheres 0.0
2379 Male, age 80, both hemispheres 0.0
2563 Male, age 74, both hemispheres 0.0
2628 Female, age 91, both hemispheres 0.0
Kolliker-Fuse nucleus
nTPM: 84.9
2163 Male, age 80, both hemispheres 222.2
2793 Female, age 91, left hemisphere 29.6
2315 Male, age 76, right hemisphere 2.8
Lateral lemniscal nuclei
nTPM: 147.0
2169 Male, age 76, both hemispheres 214.1
2036 Male, age 80, both hemispheres 179.8
2453 Male, age 74, right hemisphere 168.1
2746 Female, age 85, left hemisphere 151.4
2320 Female, age 91, left hemisphere 21.5
Lateral medullary reticular nucleus
nTPM: 85.5
2305 Male, age 74, both hemispheres 232.1
2044 Male, age 76, both hemispheres 218.7
2190 Female, age 85, both hemispheres 45.9
2852 Male, age 80, both hemispheres 16.5
2374 Male, age 61, both hemispheres 0.0
2804 Female, age 91, both hemispheres 0.0
Lateral parabrachial nucleus
nTPM: 85.7
2139 Female, age 85, right hemisphere 183.7
2013 Male, age 80, both hemispheres 82.1
2790 Male, age 61, both hemispheres 77.1
2792 Male, age 76, both hemispheres 0.0
Lateral vestibular nucleus
nTPM: 132.0
2184 Male, age 76, both hemispheres 221.4
2311 Male, age 80, both hemispheres 42.6
Locus coeruleus
nTPM: 446.7
2123 Female, age 91, both hemispheres 758.9
2720 Male, age 74, both hemispheres 692.6
2014 Male, age 55, unknown 509.7
1980 Male, age 76, both hemispheres 379.8
2317 Female, age 72, unknown 279.7
2788 Male, age 74, unknown 266.6
2162 Male, age 80, both hemispheres 239.2
Medial olivary nucleus
nTPM: 0.0
1943 Male, age 61, both hemispheres 0.0
1962 Male, age 76, both hemispheres 0.0
2138 Female, age 91, both hemispheres 0.0
2851 Male, age 80, both hemispheres 0.0
Medial parabrachial nucleus
nTPM: 90.5
2170 Female, age 91, both hemispheres 155.9
2156 Male, age 61, both hemispheres 91.9
2854 Male, age 80, both hemispheres 87.5
2786 Male, age 76, both hemispheres 61.3
2463 Female, age 85, right hemisphere 56.0
Medial periolivary nuclei
nTPM: 154.2
2171 Female, age 85, both hemispheres 298.2
2063 Male, age 76, both hemispheres 274.8
2791 Male, age 74, right hemisphere 159.6
2081 Male, age 80, both hemispheres 38.6
2458 Female, age 91, both hemispheres 0.0
Medial vestibular nucleus
nTPM: 208.9
2801 Male, age 74, both hemispheres 360.2
2134 Male, age 76, both hemispheres 289.8
2093 Male, age 80, both hemispheres 185.2
2743 Female, age 85, both hemispheres 179.9
2803 Female, age 91, both hemispheres 168.8
2624 Male, age 61, both hemispheres 69.5
Motor facial nucleus
nTPM: 146.9
2062 Male, age 76, both hemispheres 325.9
2365 Male, age 74, right hemisphere 226.7
2126 Male, age 61, both hemispheres 134.4
2327 Male, age 80, both hemispheres 101.5
2697 Female, age 85, both hemispheres 93.1
2795 Female, age 91, both hemispheres 0.0
Motor hypoglossal nucleus
nTPM: 153.2
2125 Female, age 91, both hemispheres 253.0
2132 Female, age 85, both hemispheres 217.2
2461 Male, age 61, both hemispheres 124.2
2277 Male, age 76, both hemispheres 86.8
2182 Male, age 80, both hemispheres 84.8
Motor trigeminal nucleus
nTPM: 92.6
2079 Male, age 80, both hemispheres 168.7
2309 Male, age 76, both hemispheres 89.9
2560 Male, age 74, both hemispheres 88.3
2335 Male, age 61, both hemispheres 83.5
2321 Female, age 91, both hemispheres 32.9
Nuclei of the trapezoid body
nTPM: 229.0
2159 Male, age 61, both hemispheres 435.7
2735 Female, age 85, both hemispheres 320.8
1983 Male, age 76, both hemispheres 270.0
2166 Male, age 80, both hemispheres 118.5
2368 Female, age 91, both hemispheres 0.0
Nucleus ambiguus
nTPM: 118.9
2096 Female, age 85, both hemispheres 237.9
2071 Male, age 76, both hemispheres 0.0
Nucleus cuneatus
nTPM: 28.3
2564 Male, age 74, both hemispheres 66.9
2100 Male, age 76, both hemispheres 60.9
2562 Male, age 61, both hemispheres 42.2
2380 Male, age 80, both hemispheres 0.0
2805 Female, age 91, both hemispheres 0.0
2808 Female, age 85, both hemispheres 0.0
Nucleus gracilis
nTPM: 20.1
2627 Male, age 74, both hemispheres 60.5
2299 Female, age 85, both hemispheres 0.0
2382 Male, age 80, both hemispheres 0.0
Nucleus raphe magnus
nTPM: 255.7
2160 Male, age 61, both hemispheres 613.3
2455 Male, age 74, both hemispheres 375.7
2172 Female, age 85, both hemispheres 294.8
2051 Male, age 76, both hemispheres 115.5
2328 Male, age 80, both hemispheres 112.5
2459 Female, age 91, both hemispheres 22.1
Nucleus raphe obscurus
nTPM: 23.7
2800 Male, age 61, midline 50.6
2845 Female, age 85, midline 20.5
2142 Male, age 76, midline 0.0
Nucleus raphe pallidus
nTPM: 97.0
2183 Male, age 80, midline 203.8
1924 Male, age 61, midline 87.2
2145 Male, age 76, midline 0.0
Nucleus tractus solitarii
nTPM: 108.7
2144 Female, age 91, right hemisphere 231.2
2656 Male, age 76, both hemispheres 100.4
2307 Male, age 80, both hemispheres 53.4
2191 Female, age 85, both hemispheres 50.0
Paramedian reticular nucleus
nTPM: 226.8
2057 Male, age 80, both hemispheres 315.3
2313 Male, age 61, both hemispheres 291.1
2050 Female, age 85, both hemispheres 227.3
2052 Male, age 76, both hemispheres 73.6
Parvicellular reticular nuclei
nTPM: 144.0
2119 Male, age 80, both hemispheres 195.4
2095 Male, age 76, both hemispheres 123.2
2558 Male, age 74, both hemispheres 113.5
Parvicellular reticular nuclei, medullary
nTPM: 174.9
2189 Female, age 91, both hemispheres 250.1
2091 Female, age 85, both hemispheres 174.7
2181 Male, age 80, left hemisphere 99.8
Peritrigeminal nucleus
nTPM: 147.3
2179 Male, age 61, both hemispheres 172.5
2136 Male, age 76, both hemispheres 135.2
2067 Female, age 85, both hemispheres 134.2
Pontine nuclei
nTPM: 244.1
2727 Male, age 61, right hemisphere 632.1
2109 Female, age 72, unknown 274.9
1863 Male, age 55, unknown 257.9
2787 Female, age 85, both hemispheres 251.9
2454 Male, age 74, left hemisphere 222.7
1968 Male, age 76, left hemisphere 217.2
2115 Male, age 80, left hemisphere 63.5
2319 Female, age 91, both hemispheres 33.0
Pontine raphe nucleus
nTPM: 186.2
2122 Female, age 85, midline 232.2
2853 Male, age 76, midline 140.3
Posteroventral cochlear nucleus
nTPM: 64.5
2752 Female, age 85, both hemispheres 207.0
2070 Male, age 76, both hemispheres 108.8
2371 Male, age 61, both hemispheres 6.8
2135 Female, age 91, both hemispheres 0.0
2341 Male, age 80, both hemispheres 0.0
Prepositus hypoglossal nucleus
nTPM: 132.2
2855 Female, age 85, right hemisphere 196.5
2086 Male, age 80, both hemispheres 67.9
Principal sensory trigeminal nucleus
nTPM: 229.1
2158 Male, age 61, both hemispheres 511.3
2008 Male, age 80, left hemisphere 257.9
2324 Male, age 76, both hemispheres 133.6
2367 Female, age 91, left hemisphere 13.4
Reticular pontine nucleus, caudal
nTPM: 113.7
2092 Male, age 76, both hemispheres 158.2
2332 Male, age 80, right hemisphere 156.3
2559 Male, age 74, both hemispheres 140.3
2457 Female, age 91, both hemispheres 0.0
Reticular pontine nucleus, oral
nTPM: 135.1
2361 Male, age 74, both hemispheres 337.6
2012 Female, age 85, both hemispheres 168.6
1939 Male, age 80, both hemispheres 92.8
2167 Male, age 76, both hemispheres 76.8
2366 Female, age 91, both hemispheres 0.0
Reticulotegmental nucleus
nTPM: 98.5
2325 Male, age 76, both hemispheres 178.2
2452 Male, age 74, both hemispheres 91.6
2333 Male, age 80, both hemispheres 74.1
2322 Female, age 91, both hemispheres 50.1
Spinal trigeminal nucleus, caudal
nTPM: 113.2
2390 Female, age 91, both hemispheres 318.7
2447 Male, age 76, both hemispheres 137.5
2642 Male, age 74, both hemispheres 56.2
2308 Male, age 80, both hemispheres 30.3
2312 Male, age 61, both hemispheres 23.3
Spinal trigeminal nucleus, interpolar
nTPM: 228.6
2625 Male, age 61, both hemispheres 401.1
2066 Male, age 76, right hemisphere 360.3
2033 Male, age 80, both hemispheres 159.9
2386 Female, age 85, both hemispheres 118.0
2389 Female, age 91, both hemispheres 103.5
Spinal trigeminal nucleus, oral
nTPM: 120.8
2737 Female, age 85, both hemispheres 153.0
2164 Male, age 80, both hemispheres 145.0
1978 Male, age 76, both hemispheres 64.4
Spinal vestibular nucleus
nTPM: 123.1
2186 Female, age 91, both hemispheres 209.2
2780 Male, age 80, both hemispheres 183.5
2748 Male, age 76, both hemispheres 124.5
2806 Female, age 85, both hemispheres 103.1
2384 Male, age 74, both hemispheres 68.4
2796 Male, age 61, both hemispheres 49.7
Subcoeruleus area
nTPM: 116.7
2323 Female, age 91, left hemisphere 209.3
1958 Male, age 80, both hemispheres 140.7
2089 Male, age 76, left hemisphere 123.3
2451 Male, age 74, both hemispheres 65.9
2369 Female, age 85, left hemisphere 44.5
Superior olive
nTPM: 132.7
1875 Female, age 85, both hemispheres 214.3
2364 Male, age 74, right hemisphere 210.3
2020 Male, age 76, both hemispheres 128.7
2329 Male, age 80, right hemisphere 83.7
2561 Female, age 91, both hemispheres 26.4
Superior vestibular nucleus
nTPM: 104.2
2015 Male, age 80, both hemispheres 127.2
2383 Male, age 74, both hemispheres 104.4
2061 Male, age 76, both hemispheres 81.0
Ventral medullary reticular nucleus
nTPM: 57.1
2060 Male, age 76, both hemispheres 114.3
2372 Male, age 61, both hemispheres 0.0
Ventral periolivary nuclei
nTPM: 154.8
2130 Female, age 85, both hemispheres 255.7
2165 Male, age 80, both hemispheres 198.4
2023 Male, age 76, both hemispheres 97.8
2794 Female, age 91, left hemisphere 67.3
Ventrolateral medulla, A1-C1 cell groups
nTPM: 94.1
2741 Female, age 85, both hemispheres 190.1
1986 Male, age 76, both hemispheres 175.6
2180 Male, age 61, both hemispheres 101.4
2302 Female, age 91, both hemispheres 3.5
2118 Male, age 80, both hemispheres 0.0
Ventrolateral tegmental area, A5 NE cell group
nTPM: 107.1
2449 Male, age 74, both hemispheres 232.6
1959 Male, age 76, both hemispheres 123.2
2359 Male, age 61, both hemispheres 114.8
2840 Female, age 85, both hemispheres 97.3
2161 Male, age 80, both hemispheres 74.7
2456 Female, age 91, both hemispheres 0.0

PONS AND MEDULLA - FANTOM5 CAGEi
Max Scaled Tags Per Million 2171.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Locus coeruleus
Scaled Tags Per Million: 1080.3
FF:10182-103D2 60 years, female 1367.2
FF:10165-103B3 76 years, female 793.4
Medulla oblongata
Scaled Tags Per Million: 608.2
FF:10038-101F2 18-64 years, mixed 972.4
FF:10155-103A2 76 years, female 438.3
FF:10174-103C3 60 years, female 413.8
Pons
Scaled Tags Per Million: 2171.6
FF:10033-101E6 18-54 years, mixed 2171.6

PONS AND MEDULLA - Pig RNA-seqi
Average nTPM 728.1
Pig sample Sample description nTPM
Medulla oblongata
nTPM: 590.8
Samples: 4

Max nTPM: 724.5
Min nTPM: 543.5
Sample A Female 550.4
Sample B Female 544.8
Sample C Male 724.5
Sample D Male 543.5
Pons
nTPM: 728.2
Samples: 4

Max nTPM: 885.9
Min nTPM: 572.5
Sample A Female 885.9
Sample B Female 572.5
Sample C Male 768.0
Sample D Male 686.2

PONS AND MEDULLA - Mouse RNA-seqi
Average nTPM 531.8
Mouse sample Sample description nTPM
Pons and medulla
nTPM: 531.8
Samples: 4

Max nTPM: 699.1
Min nTPM: 393.1
Sample A Male 699.1
Sample B Male 447.2
Sample C Female 587.6
Sample D Female 393.1

PONS AND MEDULLA - Allen Mouse ISHi
Max Expression energy 17.8
Allen experiment id Experiment description Expression energy
Medulla oblongata
Expression energy: 17.8
79556674 Antisense, RP_071204_01_C07, Mouse strain C57BL/6J (56 days, male) 21.3
79632309 Antisense, RP_071204_01_C07, Mouse strain C57BL/6J (56 days, male) 18.2
1088 Antisense, RP_Baylor_253988, Mouse strain C57BL/6J (56 days, male) 14.2
1089 Antisense, RP_Baylor_253988, Mouse strain C57BL/6J (56 days, male) 13.1
Pons
Expression energy: 17.7
79556674 Antisense, RP_071204_01_C07, Mouse strain C57BL/6J (56 days, male) 21.3
79632309 Antisense, RP_071204_01_C07, Mouse strain C57BL/6J (56 days, male) 16.8
1089 Antisense, RP_Baylor_253988, Mouse strain C57BL/6J (56 days, male) 14.0
1088 Antisense, RP_Baylor_253988, Mouse strain C57BL/6J (56 days, male) 13.6

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The Human Protein Atlas

The Human Protein Atlas project is funded
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