HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:20.8 nTPM
HPA:20.8 nTPM
GTEx:13.7 nTPM
FANTOM5:176.3 Scaled Tags Per Million
Pig:55.4 nTPM
Mouse:25.0 nTPM
Allen mouse:2.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA012128Antibody HPA012297
Glial cells Not detectedMedium
Neuronal cells Not detectedMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 20.8
Sample id Sample description nTPM
Hippocampus
nTPM: 18.7
2148 Female, age 91, left hemisphere 33.5
2529 Female, age 94, left hemisphere 31.1
2621 Female, age 67, right hemisphere 17.9
1911 Female, age 85, right hemisphere 16.5
1855 Male, age 76, left hemisphere 9.3
1898 Male, age 80, left hemisphere 4.0
Dentate gyrus
nTPM: 13.3
2528 Male, age 74, both hemispheres 20.4
2531 Female, age 67, both hemispheres 18.5
2246 Female, age 85, both hemispheres 17.7
1927 Female, age 91, both hemispheres 13.9
2010 Male, age 76, both hemispheres 5.4
2530 Female, age 94, left hemisphere 3.7
Entorhinal gyrus
nTPM: 19.7
2117 Female, age 91, right hemisphere 30.9
2686 Male, age 75, right hemisphere 21.8
1787 Male, age 76, left hemisphere 18.4
1938 Female, age 85, left hemisphere 18.4
2764 Male, age 80, right hemisphere 14.5
2613 Female, age 94, left hemisphere 14.4
Hippocampus, CA1
nTPM: 18.6
2527 Male, age 74, both hemispheres 29.2
2045 Male, age 76, both hemispheres 19.8
1873 Female, age 85, both hemispheres 17.3
2082 Female, age 91, right hemisphere 15.4
2749 Male, age 80, left hemisphere 11.4
Hippocampus, CA2
nTPM: 9.8
2113 Female, age 91, right hemisphere 21.4
2437 Female, age 94, left hemisphere 9.2
1892 Male, age 76, both hemispheres 8.8
2249 Male, age 74, both hemispheres 8.3
1940 Female, age 85, left hemisphere 8.1
1963 Male, age 80, left hemisphere 2.9
Hippocampus, CA3
nTPM: 15.3
2861 Female, age 67, both hemispheres 23.5
1867 Male, age 76, both hemispheres 17.5
1891 Female, age 85, both hemispheres 16.9
2620 Female, age 94, left hemisphere 16.9
2137 Male, age 80, left hemisphere 10.5
2436 Male, age 74, both hemispheres 6.4
Parahippocampal cortex
nTPM: 18.5
2622 Female, age 67, right hemisphere 40.7
2692 Male, age 74, both hemispheres 38.1
1933 Female, age 85, both hemispheres 18.6
2245 Female, age 91, both hemispheres 17.1
1850 Male, age 80, both hemispheres 14.8
1990 Female, age 91, right hemisphere 14.1
2250 Female, age 67, right hemisphere 12.9
2018 Male, age 76, both hemispheres 10.0
2532 Female, age 72, left hemisphere 9.5
2693 Female, age 94, both hemispheres 9.2
Perirhinal gyrus
nTPM: 13.2
1847 Female, age 91, left hemisphere 18.8
1794 Male, age 80, right hemisphere 12.6
2848 Male, age 76, right hemisphere 12.5
1841 Female, age 85, right hemisphere 11.5
2521 Female, age 94, right hemisphere 10.5
Subiculum
nTPM: 20.8
2619 Male, age 74, both hemispheres 38.0
2438 Female, age 94, left hemisphere 31.5
2729 Female, age 91, right hemisphere 29.5
1977 Female, age 85, both hemispheres 10.4
2042 Male, age 76, both hemispheres 8.7
1901 Male, age 80, both hemispheres 6.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.7
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.7
Samples: 197

Max nTPM: 28.0
Min nTPM: 5.7
Std nTPM: 3.9
Median nTPM: 13.3
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 28.0
GTEX-13OW8-0011-R1a-SM-5L3HI 60-69 years, male 26.5
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 24.1
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 23.5
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 22.7
GTEX-17JCI-0011-R1b-SM-718A3 60-69 years, female 22.5
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 22.4
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 22.1
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 21.7
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 21.3
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 21.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 176.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 176.3
FF:10153-102I9 76 years, female 234.4
FF:10169-103B7 60 years, female 118.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 55.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 55.4
Samples: 4

Max nTPM: 59.3
Min nTPM: 51.2
Sample A Female 51.2
Sample B Female 54.9
Sample C Male 56.3
Sample D Male 59.3
Entorhinal cortex
nTPM: 52.8
Samples: 4

Max nTPM: 55.3
Min nTPM: 51.0
Sample A Female 51.0
Sample B Female 55.3
Sample C Male 53.0
Sample D Male 52.0
Subiculum
nTPM: 53.3
Samples: 4

Max nTPM: 55.0
Min nTPM: 50.2
Sample A Female 55.0
Sample B Female 54.5
Sample C Male 53.3
Sample D Male 50.2
Ventral hippocampus
nTPM: 53.6
Samples: 4

Max nTPM: 55.4
Min nTPM: 52.0
Sample A Female 52.0
Sample B Female 54.7
Sample C Male 55.4
Sample D Male 52.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 25.0
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 25.0
Samples: 4

Max nTPM: 32.5
Min nTPM: 20.2
Sample A Male 23.2
Sample B Male 24.0
Sample C Female 20.2
Sample D Female 32.5
Hippocampal formation
nTPM: 23.2
Samples: 4

Max nTPM: 27.3
Min nTPM: 19.7
Sample A Male 19.9
Sample B Male 27.3
Sample C Female 25.7
Sample D Female 19.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.1
73808606 Antisense, RP_051212_03_C08, Mouse strain C57BL/6J (56 days, male) 4.1
74431792 Antisense, RP_060207_02_E05, Mouse strain C57BL/6J (56 days, male) 0.2

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