HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:12.0 nTPM
HPA:12.0 nTPM
GTEx:12.1 nTPM
FANTOM5:26.2 Scaled Tags Per Million
Pig:47.0 nTPM
Mouse:1.5 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA004749
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 12.0
Sample id Sample description nTPM
Hippocampus
nTPM: 12.0
2529 Female, age 94, left hemisphere 12.6
1855 Male, age 76, left hemisphere 12.5
2148 Female, age 91, left hemisphere 12.2
1898 Male, age 80, left hemisphere 11.9
1911 Female, age 85, right hemisphere 11.9
2621 Female, age 67, right hemisphere 11.0
Dentate gyrus
nTPM: 11.6
2246 Female, age 85, both hemispheres 12.4
2528 Male, age 74, both hemispheres 12.2
2530 Female, age 94, left hemisphere 12.2
2010 Male, age 76, both hemispheres 11.8
1927 Female, age 91, both hemispheres 10.7
2531 Female, age 67, both hemispheres 10.3
Entorhinal gyrus
nTPM: 11.1
2117 Female, age 91, right hemisphere 13.3
1938 Female, age 85, left hemisphere 11.5
1787 Male, age 76, left hemisphere 10.8
2764 Male, age 80, right hemisphere 10.8
2686 Male, age 75, right hemisphere 10.3
2613 Female, age 94, left hemisphere 9.9
Hippocampus, CA1
nTPM: 11.2
2527 Male, age 74, both hemispheres 12.6
2082 Female, age 91, right hemisphere 11.7
1873 Female, age 85, both hemispheres 11.3
2045 Male, age 76, both hemispheres 10.4
2749 Male, age 80, left hemisphere 9.9
Hippocampus, CA2
nTPM: 10.8
2249 Male, age 74, both hemispheres 12.1
2437 Female, age 94, left hemisphere 11.4
2113 Female, age 91, right hemisphere 11.0
1963 Male, age 80, left hemisphere 10.3
1940 Female, age 85, left hemisphere 10.2
1892 Male, age 76, both hemispheres 9.5
Hippocampus, CA3
nTPM: 10.8
2620 Female, age 94, left hemisphere 11.8
1891 Female, age 85, both hemispheres 11.3
2137 Male, age 80, left hemisphere 11.0
2436 Male, age 74, both hemispheres 10.6
2861 Female, age 67, both hemispheres 10.5
1867 Male, age 76, both hemispheres 9.9
Parahippocampal cortex
nTPM: 10.8
2250 Female, age 67, right hemisphere 11.8
1850 Male, age 80, both hemispheres 11.3
1933 Female, age 85, both hemispheres 11.1
2622 Female, age 67, right hemisphere 10.9
1990 Female, age 91, right hemisphere 10.8
2692 Male, age 74, both hemispheres 10.8
2245 Female, age 91, both hemispheres 10.6
2018 Male, age 76, both hemispheres 10.2
2532 Female, age 72, left hemisphere 10.2
2693 Female, age 94, both hemispheres 10.0
Perirhinal gyrus
nTPM: 10.6
1847 Female, age 91, left hemisphere 11.1
1794 Male, age 80, right hemisphere 10.9
2521 Female, age 94, right hemisphere 10.4
1841 Female, age 85, right hemisphere 10.3
2848 Male, age 76, right hemisphere 10.3
Subiculum
nTPM: 11.0
2729 Female, age 91, right hemisphere 11.8
2042 Male, age 76, both hemispheres 11.6
2619 Male, age 74, both hemispheres 11.5
1977 Female, age 85, both hemispheres 11.2
1901 Male, age 80, both hemispheres 10.4
2438 Female, age 94, left hemisphere 9.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 12.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 12.1
Samples: 197

Max nTPM: 27.3
Min nTPM: 4.5
Std nTPM: 4.3
Median nTPM: 11.5
GTEX-11ZVC-0011-R1b-SM-5BC6M 50-59 years, female 27.3
GTEX-1F6IF-0011-R1b-SM-9WG78 60-69 years, male 27.2
GTEX-QVUS-0011-R1A-SM-3GAD2 60-69 years, female 24.5
GTEX-1F75W-0011-R1a-SM-ARU81 60-69 years, male 24.1
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 22.9
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 22.8
GTEX-12ZZX-0011-R1a-SM-5EQ6B 40-49 years, female 21.8
GTEX-13FHP-0011-R1b-SM-5K7XL 50-59 years, male 21.7
GTEX-13FHO-0011-R1b-SM-5KLZG 60-69 years, male 20.7
GTEX-ZDXO-0011-R1a-SM-4WKF4 60-69 years, male 20.7
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 20.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 26.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 26.2
FF:10169-103B7 60 years, female 27.2
FF:10153-102I9 76 years, female 25.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 47.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 47.0
Samples: 4

Max nTPM: 61.9
Min nTPM: 39.0
Sample A Female 61.9
Sample B Female 39.6
Sample C Male 47.6
Sample D Male 39.0
Entorhinal cortex
nTPM: 41.9
Samples: 4

Max nTPM: 52.0
Min nTPM: 37.3
Sample A Female 38.7
Sample B Female 52.0
Sample C Male 39.5
Sample D Male 37.3
Subiculum
nTPM: 38.9
Samples: 4

Max nTPM: 51.0
Min nTPM: 31.8
Sample A Female 51.0
Sample B Female 37.8
Sample C Male 31.8
Sample D Male 34.9
Ventral hippocampus
nTPM: 42.2
Samples: 4

Max nTPM: 44.9
Min nTPM: 35.4
Sample A Female 43.8
Sample B Female 35.4
Sample C Male 44.6
Sample D Male 44.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 1.5
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 1.5
Samples: 4

Max nTPM: 2.2
Min nTPM: 0.9
Sample A Male 0.9
Sample B Male 1.7
Sample C Female 1.2
Sample D Female 2.2
Hippocampal formation
nTPM: 1.0
Samples: 4

Max nTPM: 1.4
Min nTPM: 0.8
Sample A Male 1.4
Sample B Male 0.9
Sample C Female 0.8
Sample D Female 0.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
69782951 Antisense, RP_050505_04_A12, Mouse strain C57BL/6J (56 days, male) 0.1

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