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A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.
Protein expressioni
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis
HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM
13.0
Sample id
Sample description
nTPM
Hippocampus nTPM: 12.8
1855
Male, age 76, left hemisphere
13.4
1898
Male, age 80, left hemisphere
13.0
1911
Female, age 85, right hemisphere
12.7
2529
Female, age 94, left hemisphere
12.6
2621
Female, age 67, right hemisphere
12.5
2148
Female, age 91, left hemisphere
12.4
Dentate gyrus nTPM: 13.0
2530
Female, age 94, left hemisphere
13.4
2010
Male, age 76, both hemispheres
13.3
2531
Female, age 67, both hemispheres
13.2
2246
Female, age 85, both hemispheres
13.0
1927
Female, age 91, both hemispheres
12.9
2528
Male, age 74, both hemispheres
12.3
Entorhinal gyrus nTPM: 12.4
1787
Male, age 76, left hemisphere
12.9
1938
Female, age 85, left hemisphere
12.7
2117
Female, age 91, right hemisphere
12.4
2686
Male, age 75, right hemisphere
12.4
2764
Male, age 80, right hemisphere
12.0
2613
Female, age 94, left hemisphere
11.7
Hippocampus, CA1 nTPM: 13.0
2045
Male, age 76, both hemispheres
14.0
1873
Female, age 85, both hemispheres
13.9
2527
Male, age 74, both hemispheres
12.7
2082
Female, age 91, right hemisphere
12.5
2749
Male, age 80, left hemisphere
11.9
Hippocampus, CA2 nTPM: 12.6
1940
Female, age 85, left hemisphere
13.3
2437
Female, age 94, left hemisphere
12.9
2249
Male, age 74, both hemispheres
12.8
1892
Male, age 76, both hemispheres
12.7
1963
Male, age 80, left hemisphere
12.1
2113
Female, age 91, right hemisphere
12.0
Hippocampus, CA3 nTPM: 12.7
1867
Male, age 76, both hemispheres
13.5
2861
Female, age 67, both hemispheres
13.2
1891
Female, age 85, both hemispheres
12.6
2620
Female, age 94, left hemisphere
12.5
2436
Male, age 74, both hemispheres
12.3
2137
Male, age 80, left hemisphere
11.9
Parahippocampal cortex nTPM: 12.7
2018
Male, age 76, both hemispheres
14.5
1933
Female, age 85, both hemispheres
13.6
2250
Female, age 67, right hemisphere
13.2
2532
Female, age 72, left hemisphere
12.8
1850
Male, age 80, both hemispheres
12.7
2245
Female, age 91, both hemispheres
12.5
2693
Female, age 94, both hemispheres
12.5
1990
Female, age 91, right hemisphere
12.0
2692
Male, age 74, both hemispheres
11.9
2622
Female, age 67, right hemisphere
11.3
Perirhinal gyrus nTPM: 12.4
2848
Male, age 76, right hemisphere
12.8
2521
Female, age 94, right hemisphere
12.7
1794
Male, age 80, right hemisphere
12.2
1841
Female, age 85, right hemisphere
12.2
1847
Female, age 91, left hemisphere
12.2
Subiculum nTPM: 12.6
2042
Male, age 76, both hemispheres
13.7
1977
Female, age 85, both hemispheres
12.7
2729
Female, age 91, right hemisphere
12.7
2438
Female, age 94, left hemisphere
12.5
1901
Male, age 80, both hemispheres
12.3
2619
Male, age 74, both hemispheres
12.1
HIPPOCAMPAL FORMATION - GTEx RNA-seqi
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM: 43.7
Min nTPM: 1.2
Std nTPM: 6.4
Median nTPM: 6.0
GTEX-OHPN-0011-R1A-SM-2I5GB
60-69 years, female
43.7
GTEX-183WM-0011-R1a-SM-718A8
70-79 years, female
42.0
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
34.4
GTEX-X4EP-0011-R1A-SM-3P624
60-69 years, female
31.9
GTEX-14LZ3-0011-R1a-SM-69LP5
60-69 years, female
26.6
GTEX-14LLW-0011-R1a-SM-5ZZVD
70-79 years, female
26.2
GTEX-13NZ8-0011-R1b-SM-5KM3V
60-69 years, female
24.5
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
24.0
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
21.6
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
19.1
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
18.8
GTEX-16NPV-0011-R1b-SM-7MGVZ
50-59 years, female
18.7
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
18.1
GTEX-15DCD-0011-R1b-SM-6LPIJ
70-79 years, female
17.9
GTEX-14PN4-0011-R1b-SM-69LP8
50-59 years, male
16.4
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
16.3
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
16.0
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
16.0
GTEX-1H1DG-0011-R1b-SM-CKZP1
70-79 years, male
16.0
GTEX-14BIM-0011-R1a-SM-69LQI
60-69 years, female
14.9
GTEX-1HR98-0011-R1a-SM-ARZLQ
60-69 years, male
14.3
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
13.7
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
13.7
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
13.6
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
13.6
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
13.6
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
13.5
GTEX-1J8Q2-0011-R1a-SM-D4P2D
60-69 years, male
12.7
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
12.6
GTEX-17HII-0011-R1b-SM-7MGVW
50-59 years, male
12.6
GTEX-1A3MX-0011-R1b-SM-7P8PH
60-69 years, male
12.1
GTEX-1E2YA-0011-R1b-SM-CJI29
50-59 years, male
12.1
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
11.9
GTEX-17EVQ-0011-R1a-SM-7189S
70-79 years, male
11.8
GTEX-14PQA-0011-R1b-SM-6EU1G
50-59 years, female
11.6
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
11.4
GTEX-17F97-0011-R1b-SM-7IGM9
50-59 years, male
11.4
GTEX-14C5O-0011-R1b-SM-6AJBW
60-69 years, male
11.2
GTEX-11WQC-0011-R1b-SM-DO932
60-69 years, male
11.2
GTEX-1CB4J-0011-R1a-SM-9WG64
60-69 years, male
11.1
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
10.8
GTEX-1GMR8-0011-R1b-SM-CJI2O
50-59 years, female
10.6
GTEX-1GN1U-0011-R1a-SM-CJI25
50-59 years, female
10.2
GTEX-1ICLZ-0011-R1b-SM-A9SM3
60-69 years, male
10.2
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
10.1
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
10.1
GTEX-1IKK5-0011-R1b-SM-CE6SQ
60-69 years, male
10.1
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
9.9
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
9.9
GTEX-1HGF4-0011-R1a-SM-CJI3S
60-69 years, male
9.9
GTEX-1EX96-0011-R1a-SM-CE6R5
50-59 years, male
9.6
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
9.5
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
9.1
GTEX-1F75W-0011-R1a-SM-ARU81
60-69 years, male
9.1
GTEX-17MF6-0011-R1a-SM-72D6O
40-49 years, male
9.0
GTEX-1HSKV-0011-R1b-SM-CMKH7
60-69 years, male
9.0
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
8.8
GTEX-N7MT-0011-R1a-SM-CNPO1
60-69 years, female
8.8
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
8.5
GTEX-1HSMO-0011-R1a-SM-CM2SV
60-69 years, male
8.5
GTEX-1CB4G-0011-R1b-SM-9QEHT
60-69 years, male
8.4
GTEX-1J1OQ-0011-R1a-SM-A9G1Z
40-49 years, female
8.3
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
8.2
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
8.1
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
7.9
GTEX-15CHQ-0011-R1a-SM-COH27
60-69 years, male
7.9
GTEX-1H3NZ-0011-R1a-SM-CKZP5
60-69 years, male
7.9
GTEX-11GS4-0011-R1a-SM-DO129
60-69 years, male
7.8
GTEX-15UF6-0011-R1a-SM-9QEGH
70-79 years, female
7.8
GTEX-1IY9M-0011-R1a-SM-EXURZ
60-69 years, male
7.8
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
7.7
GTEX-1GN73-0011-R1a-SM-CKZNT
60-69 years, male
7.7
GTEX-1A32A-0011-R1a-SM-7P8SQ
50-59 years, female
7.4
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
7.3
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
7.3
GTEX-14E7W-0011-R1b-SM-5YYAT
70-79 years, male
7.2
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
7.2
GTEX-1GTWX-0011-R1a-SM-CE6RL
60-69 years, male
7.2
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
7.1
GTEX-1H3O1-0011-R1b-SM-CL554
60-69 years, male
7.0
GTEX-1H23P-0011-R1a-SM-ACKVC
60-69 years, male
6.9
GTEX-1I1GS-0011-R1a-SM-CJI43
60-69 years, male
6.9
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
6.8
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
6.8
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
6.7
GTEX-11GSP-0011-R1a-SM-9QEJ3
60-69 years, female
6.7
GTEX-14PJM-0011-R1a-SM-CNPO3
50-59 years, female
6.5
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
6.4
GTEX-1A8G6-0011-R1a-SM-7P8PC
60-69 years, male
6.4
GTEX-1EH9U-0011-R1b-SM-CJI2B
60-69 years, male
6.4
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
6.3
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
6.3
GTEX-18A6Q-0011-R1b-SM-731DI
60-69 years, male
6.2
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
6.2
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
6.1
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
6.1
GTEX-1H1ZS-0011-R1b-SM-A9G1E
70-79 years, male
6.1
GTEX-11EI6-0011-R1a-SM-DO93L
60-69 years, male
6.0
GTEX-1C6VQ-0011-R1a-SM-7P8Q2
50-59 years, male
6.0
GTEX-1GF9V-0011-R1a-SM-CKZNQ
60-69 years, male
6.0
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
5.9
GTEX-15ER7-0011-R1b-SM-7KUE1
20-29 years, female
5.9
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
5.9
GTEX-1CAV2-0011-R1a-SM-ARZML
40-49 years, female
5.9
GTEX-1F48J-0011-R1a-SM-9QEIC
50-59 years, female
5.9
GTEX-1H3VE-0011-R1a-SM-A9G1K
40-49 years, male
5.9
GTEX-1LG7Y-0011-R1a-SM-EYYWV
50-59 years, male
5.9
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
5.8
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
5.8
GTEX-1EMGI-0011-R1b-SM-9OSWZ
60-69 years, male
5.8
GTEX-1GZHY-0011-R1a-SM-CE6RR
50-59 years, female
5.8
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
5.7
GTEX-14E6D-0011-R1b-SM-5YYAW
50-59 years, male
5.6
GTEX-11TUW-0011-R1a-SM-DO92S
60-69 years, male
5.6
GTEX-1E1VI-0011-R1a-SM-ARZMM
50-59 years, male
5.6
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y
40-49 years, male
5.6
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
5.5
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
5.4
GTEX-16XZZ-0011-R1a-SM-7LTAH
60-69 years, male
5.3
GTEX-16YQH-0011-R1a-SM-7LT8R
30-39 years, male
5.3
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
5.2
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
5.2
GTEX-1GF9W-0011-R1a-SM-9QEIQ
60-69 years, male
5.2
GTEX-1C64N-0011-R1b-SM-7P8Q7
50-59 years, male
5.1
GTEX-1F6I4-0011-R1a-SM-9OSWU
60-69 years, male
5.1
GTEX-1F75A-0011-R1b-SM-CE6RA
50-59 years, male
5.1
GTEX-1IDJH-0011-R1b-SM-ARU6U
70-79 years, male
5.1
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
5.0
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
5.0
GTEX-1IOXB-0011-R1a-SM-D4P27
50-59 years, male
5.0
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
4.9
GTEX-16Z82-0011-R1b-SM-7EPHZ
60-69 years, male
4.9
GTEX-16GPK-0011-R1b-SM-7EWDH
60-69 years, male
4.8
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
4.7
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
4.7
GTEX-17HHY-0011-R1a-SM-7189V
50-59 years, male
4.7
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
4.7
GTEX-1BAJH-0011-R1a-SM-7P8SV
70-79 years, male
4.7
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
4.6
GTEX-1AX9I-0011-R1b-SM-7RHG2
60-69 years, male
4.6
GTEX-1H4P4-0011-R1b-SM-CL54V
50-59 years, male
4.6
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
4.4
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
4.4
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
4.3
GTEX-1H1CY-0011-R1a-SM-CKZOZ
60-69 years, female
4.3
GTEX-1B933-0011-R1b-SM-9QEGW
50-59 years, female
4.2
GTEX-1B996-0011-R1b-SM-7P8PO
60-69 years, male
4.2
GTEX-1I1HK-0011-R1b-SM-CM2T7
60-69 years, male
4.2
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
4.1
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
4.0
GTEX-1F6IF-0011-R1b-SM-9WG78
60-69 years, male
4.0
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
3.9
GTEX-14ABY-0011-R1a-SM-6EU2W
50-59 years, male
3.9
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
3.8
GTEX-17HG3-0011-R1a-SM-7LG6H
30-39 years, female
3.8
GTEX-1B8L1-0011-R1a-SM-7P8SS
60-69 years, male
3.8
GTEX-RNOR-0011-R1A-SM-CNNP5
50-59 years, female
3.8
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
3.7
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
3.7
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
3.6
GTEX-1I1GV-0011-R1a-SM-CL559
60-69 years, male
3.6
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
3.5
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
3.5
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
3.4
GTEX-14JIY-0011-R1a-SM-68713
60-69 years, male
3.4
GTEX-1EKGG-0011-R1b-SM-9QEI1
60-69 years, male
3.4
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
3.3
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
3.3
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
3.3
GTEX-ZDXO-0011-R1a-SM-4WKF4
60-69 years, male
3.3
GTEX-1B8SF-0011-R1b-SM-7P8Q8
60-69 years, male
3.3
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
3.2
GTEX-1HT8W-0011-R1b-SM-CJI3V
30-39 years, male
3.0
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
2.9
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
2.9
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
2.9
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
2.9
GTEX-17EVP-0011-R1a-SM-7DHLA
40-49 years, male
2.9
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
2.9
GTEX-11DXW-0011-R1a-SM-DNZZD
40-49 years, male
2.8
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
2.7
GTEX-14PJO-0011-R1b-SM-6AJAK
60-69 years, male
2.7
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
2.6
GTEX-1I1GQ-0011-R1a-SM-CY8GG
50-59 years, male
2.5
GTEX-1LB8K-0011-R1b-SM-EZ6MV
50-59 years, male
2.4
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
2.3
GTEX-1EWIQ-0011-R1a-SM-9OSX7
70-79 years, female
2.3
GTEX-1GN2E-0011-R1b-SM-CE6RJ
60-69 years, male
2.2
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
2.1
GTEX-1HBPI-0011-R1b-SM-A9SKF
50-59 years, male
2.1
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
2.0
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
1.9
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
1.8
GTEX-1C6VR-0011-R1a-SM-7MXUE
60-69 years, male
1.8
GTEX-17JCI-0011-R1b-SM-718A3
60-69 years, female
1.6
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
1.5
GTEX-P44G-0011-R1A-SM-2I3FE
30-39 years, male
1.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.