HIPPOCAMPAL FORMATION - Expression summary
Protein profiling
Multiplex tissuei
Protein expressioni No data
RNA expressioni
Consensus:18.9 nTPM
HPA:18.9 nTPM
GTEx:17.8 nTPM
FANTOM5:56.6 Scaled Tags Per Million
Pig:6.1 nTPM
Mouse:2.2 nTPM
Allen mouse:0.1 Expression energy

HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 18.9
Sample id Sample description nTPM
Hippocampus
nTPM: 9.2
1911 Female, age 85, right hemisphere 14.6
2529 Female, age 94, left hemisphere 12.9
2621 Female, age 67, right hemisphere 11.5
2148 Female, age 91, left hemisphere 5.8
1855 Male, age 76, left hemisphere 5.0
1898 Male, age 80, left hemisphere 5.0
Dentate gyrus
nTPM: 9.5
2530 Female, age 94, left hemisphere 16.2
2246 Female, age 85, both hemispheres 9.4
2528 Male, age 74, both hemispheres 9.2
2010 Male, age 76, both hemispheres 9.0
2531 Female, age 67, both hemispheres 7.8
1927 Female, age 91, both hemispheres 5.5
Entorhinal gyrus
nTPM: 14.3
2117 Female, age 91, right hemisphere 26.0
2764 Male, age 80, right hemisphere 18.7
2686 Male, age 75, right hemisphere 12.3
2613 Female, age 94, left hemisphere 11.2
1938 Female, age 85, left hemisphere 9.5
1787 Male, age 76, left hemisphere 8.3
Hippocampus, CA1
nTPM: 7.6
2082 Female, age 91, right hemisphere 12.0
2527 Male, age 74, both hemispheres 10.7
2749 Male, age 80, left hemisphere 8.6
1873 Female, age 85, both hemispheres 6.9
2045 Male, age 76, both hemispheres 0.0
Hippocampus, CA2
nTPM: 12.3
1940 Female, age 85, left hemisphere 15.7
1963 Male, age 80, left hemisphere 15.7
2249 Male, age 74, both hemispheres 14.2
2113 Female, age 91, right hemisphere 13.5
2437 Female, age 94, left hemisphere 12.1
1892 Male, age 76, both hemispheres 2.6
Hippocampus, CA3
nTPM: 6.6
1891 Female, age 85, both hemispheres 19.6
1867 Male, age 76, both hemispheres 7.3
2137 Male, age 80, left hemisphere 6.7
2436 Male, age 74, both hemispheres 5.7
2620 Female, age 94, left hemisphere 0.0
2861 Female, age 67, both hemispheres 0.0
Parahippocampal cortex
nTPM: 11.7
2532 Female, age 72, left hemisphere 19.0
2692 Male, age 74, both hemispheres 16.4
1990 Female, age 91, right hemisphere 15.5
2245 Female, age 91, both hemispheres 14.7
2693 Female, age 94, both hemispheres 12.2
1850 Male, age 80, both hemispheres 10.8
1933 Female, age 85, both hemispheres 10.1
2018 Male, age 76, both hemispheres 8.9
2250 Female, age 67, right hemisphere 6.2
2622 Female, age 67, right hemisphere 3.2
Perirhinal gyrus
nTPM: 10.2
2521 Female, age 94, right hemisphere 16.1
2848 Male, age 76, right hemisphere 12.0
1841 Female, age 85, right hemisphere 8.9
1794 Male, age 80, right hemisphere 8.1
1847 Female, age 91, left hemisphere 6.0
Subiculum
nTPM: 18.9
2042 Male, age 76, both hemispheres 30.4
1901 Male, age 80, both hemispheres 24.2
1977 Female, age 85, both hemispheres 20.0
2438 Female, age 94, left hemisphere 17.5
2619 Male, age 74, both hemispheres 13.5
2729 Female, age 91, right hemisphere 7.9

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 17.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 17.8
Samples: 197

Max nTPM: 70.5
Min nTPM: 2.8
Std nTPM: 11.1
Median nTPM: 14.8
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 70.5
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 55.4
GTEX-15UF6-0011-R1a-SM-9QEGH 70-79 years, female 51.0
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 49.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 48.7
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 46.2
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 44.5
GTEX-13NZA-0011-R1b-SM-5LUAF 60-69 years, male 43.1
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 41.1
GTEX-1E2YA-0011-R1b-SM-CJI29 50-59 years, male 39.8
GTEX-1I1GV-0011-R1a-SM-CL559 60-69 years, male 39.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 56.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 56.6
FF:10153-102I9 76 years, female 71.4
FF:10169-103B7 60 years, female 41.8

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 6.1
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 4.9
Samples: 4

Max nTPM: 5.4
Min nTPM: 4.1
Sample A Female 5.4
Sample B Female 4.1
Sample C Male 5.2
Sample D Male 4.8
Entorhinal cortex
nTPM: 6.2
Samples: 4

Max nTPM: 7.0
Min nTPM: 5.7
Sample A Female 5.7
Sample B Female 5.7
Sample C Male 7.0
Sample D Male 6.2
Subiculum
nTPM: 6.0
Samples: 4

Max nTPM: 6.9
Min nTPM: 5.3
Sample A Female 6.9
Sample B Female 6.0
Sample C Male 5.7
Sample D Male 5.3
Ventral hippocampus
nTPM: 4.9
Samples: 4

Max nTPM: 5.3
Min nTPM: 4.3
Sample A Female 4.3
Sample B Female 5.2
Sample C Male 4.7
Sample D Male 5.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 2.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 2.2
Samples: 4

Max nTPM: 2.8
Min nTPM: 1.6
Sample A Male 2.2
Sample B Male 1.6
Sample C Female 2.8
Sample D Female 2.3
Hippocampal formation
nTPM: 1.9
Samples: 4

Max nTPM: 1.9
Min nTPM: 1.8
Sample A Male 1.9
Sample B Male 1.8
Sample C Female 1.8
Sample D Female 1.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.1
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.1
1805 Antisense, RP_Baylor_102951, Mouse strain C57BL/6J (56 days, male) 0.1
1804 Antisense, RP_Baylor_102951, Mouse strain C57BL/6J (56 days, male) 0.0

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