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ATP5PF
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: High
Neuronal cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:213.7 nTPM
FANTOM5:264.3 Scaled Tags Per Million
Pig:26.8 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA031069
Glial cells High
Neuronal cells High



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 213.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 213.7
Samples: 246

Max nTPM: 538.2
Min nTPM: 117.0
Std nTPM: 62.3
Median nTPM: 199.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 538.2
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 508.1
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 501.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 479.6
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 429.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 396.8
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 376.1
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 367.9
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 366.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 355.2
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 344.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 335.8
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 329.9
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 325.0
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 316.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 316.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 307.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 299.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 295.7
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 291.3
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 289.2
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 288.6
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 279.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 279.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 275.9
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 275.7
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 275.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 274.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 272.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 271.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 271.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 268.7
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 267.5
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 261.3
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 260.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 259.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 255.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 254.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 254.0
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 253.6
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 253.5
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 252.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 251.9
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 251.8
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 251.8
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 247.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 246.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 245.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 245.1
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 244.9
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 243.1
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 240.9
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 240.5
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 238.8
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 238.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 238.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 238.0
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 237.2
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 236.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 232.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 231.8
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 230.5
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 229.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 229.6
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 227.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 227.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 227.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 227.2
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 227.2
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 226.3
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 226.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 225.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 224.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 224.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 222.8
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 222.2
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 222.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 221.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 220.6
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 219.8
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 219.0
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 218.8
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 218.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 217.1
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 215.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 215.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 215.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 214.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 213.9
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 213.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 212.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 211.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 211.7
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 211.4
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 211.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 210.7
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 210.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 210.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 210.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 209.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 208.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 208.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 208.3
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 207.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 206.8
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 206.1
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 205.8
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 205.6
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 205.0
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 204.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 204.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 204.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 204.1
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 203.2
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 202.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 201.7
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 201.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 201.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 200.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 200.9
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 200.4
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 200.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 199.9
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 199.8
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 199.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 198.3
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 197.9
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 197.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 197.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 196.7
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 195.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 195.7
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 195.5
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 195.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 194.5
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 194.2
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 193.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 193.7
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 193.7
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 193.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 192.6
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 192.6
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 192.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 192.0
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 191.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 191.7
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 191.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 191.6
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 191.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 190.7
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 190.7
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 190.4
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 190.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 189.6
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 189.5
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 189.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 189.1
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 188.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 187.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 186.9
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 186.9
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 186.2
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 186.1
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 185.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 185.2
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 184.7
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 183.1
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 182.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 182.5
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 182.2
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 181.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 181.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 179.9
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 179.9
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 179.3
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 179.0
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 178.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 178.4
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 178.3
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 178.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 178.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 177.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 177.7
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 177.0
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 176.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 175.9
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 175.7
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 175.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 175.5
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 175.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 174.6
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 174.5
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 174.2
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 174.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 172.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 172.1
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 171.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 171.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 171.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 171.2
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 170.9
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 170.8
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 170.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 170.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 170.0
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 169.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 168.8
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 168.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 168.0
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 166.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 166.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 166.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 163.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 161.7
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 161.3
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 161.3
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 161.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 161.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 160.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 160.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 160.7
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 159.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 158.1
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 157.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 157.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 157.0
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 151.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 151.2
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 150.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 146.7
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 146.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 146.0
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 145.1
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 143.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 141.6
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 141.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 141.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 139.6
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 139.1
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 137.6
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 134.7
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 133.9
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 133.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 129.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 128.8
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 117.0
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 264.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 264.3
FF:10164-103B2 76 years, female 264.3

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 26.8
Pig sample Sample description nTPM
Caudate
nTPM: 26.8
Samples: 4

Max nTPM: 29.4
Min nTPM: 21.8
Sample A Female 26.6
Sample B Female 29.4
Sample C Male 29.2
Sample D Male 21.8

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