HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:71.8 nTPM
HPA:71.8 nTPM
GTEx:74.9 nTPM
FANTOM5:340.5 Scaled Tags Per Million
Pig:191.0 nTPM
Mouse:364.3 nTPM
Allen mouse:19.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA059131Antibody CAB017713
Glial cells Not detectedLow
Neuronal cells LowMedium





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 71.8
Sample id Sample description nTPM
Hippocampus
nTPM: 35.0
2621 Female, age 67, right hemisphere 75.0
1898 Male, age 80, left hemisphere 40.7
2529 Female, age 94, left hemisphere 37.7
1911 Female, age 85, right hemisphere 23.2
2148 Female, age 91, left hemisphere 17.8
1855 Male, age 76, left hemisphere 15.5
Dentate gyrus
nTPM: 33.7
2530 Female, age 94, left hemisphere 86.1
2531 Female, age 67, both hemispheres 35.6
2246 Female, age 85, both hemispheres 28.3
1927 Female, age 91, both hemispheres 26.7
2010 Male, age 76, both hemispheres 21.1
2528 Male, age 74, both hemispheres 4.3
Entorhinal gyrus
nTPM: 67.4
2613 Female, age 94, left hemisphere 123.3
2764 Male, age 80, right hemisphere 88.1
1787 Male, age 76, left hemisphere 69.1
1938 Female, age 85, left hemisphere 64.8
2686 Male, age 75, right hemisphere 55.0
2117 Female, age 91, right hemisphere 4.1
Hippocampus, CA1
nTPM: 46.9
2749 Male, age 80, left hemisphere 133.0
2527 Male, age 74, both hemispheres 65.6
1873 Female, age 85, both hemispheres 22.9
2045 Male, age 76, both hemispheres 12.9
2082 Female, age 91, right hemisphere 0.0
Hippocampus, CA2
nTPM: 34.0
2437 Female, age 94, left hemisphere 50.3
1892 Male, age 76, both hemispheres 49.2
1963 Male, age 80, left hemisphere 41.8
2249 Male, age 74, both hemispheres 32.2
1940 Female, age 85, left hemisphere 17.3
2113 Female, age 91, right hemisphere 13.1
Hippocampus, CA3
nTPM: 45.2
2137 Male, age 80, left hemisphere 97.5
2861 Female, age 67, both hemispheres 72.1
2620 Female, age 94, left hemisphere 61.1
1867 Male, age 76, both hemispheres 27.2
2436 Male, age 74, both hemispheres 13.2
1891 Female, age 85, both hemispheres 0.0
Parahippocampal cortex
nTPM: 71.8
2245 Female, age 91, both hemispheres 152.5
2622 Female, age 67, right hemisphere 126.0
2250 Female, age 67, right hemisphere 83.3
1850 Male, age 80, both hemispheres 66.5
2532 Female, age 72, left hemisphere 65.0
1990 Female, age 91, right hemisphere 58.4
2692 Male, age 74, both hemispheres 52.4
1933 Female, age 85, both hemispheres 48.4
2693 Female, age 94, both hemispheres 43.1
2018 Male, age 76, both hemispheres 21.9
Perirhinal gyrus
nTPM: 70.3
1794 Male, age 80, right hemisphere 92.2
1847 Female, age 91, left hemisphere 85.5
1841 Female, age 85, right hemisphere 62.6
2521 Female, age 94, right hemisphere 58.9
2848 Male, age 76, right hemisphere 52.3
Subiculum
nTPM: 31.6
2619 Male, age 74, both hemispheres 64.0
1901 Male, age 80, both hemispheres 42.7
1977 Female, age 85, both hemispheres 41.3
2438 Female, age 94, left hemisphere 30.3
2042 Male, age 76, both hemispheres 11.2
2729 Female, age 91, right hemisphere 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 74.9
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 74.9
Samples: 197

Max nTPM: 185.7
Min nTPM: 12.3
Std nTPM: 41.2
Median nTPM: 67.1
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 185.7
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 182.1
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 175.6
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 164.9
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 162.7
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 161.5
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 158.8
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 156.0
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 155.8
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 152.9
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 151.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 340.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 340.5
FF:10169-103B7 60 years, female 350.5
FF:10153-102I9 76 years, female 330.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 191.0
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 160.5
Samples: 4

Max nTPM: 212.1
Min nTPM: 116.4
Sample A Female 212.1
Sample B Female 172.7
Sample C Male 140.9
Sample D Male 116.4
Entorhinal cortex
nTPM: 191.0
Samples: 4

Max nTPM: 199.4
Min nTPM: 180.4
Sample A Female 199.4
Sample B Female 189.9
Sample C Male 194.3
Sample D Male 180.4
Subiculum
nTPM: 145.4
Samples: 4

Max nTPM: 189.8
Min nTPM: 122.8
Sample A Female 189.8
Sample B Female 122.8
Sample C Male 134.3
Sample D Male 134.7
Ventral hippocampus
nTPM: 138.0
Samples: 4

Max nTPM: 162.2
Min nTPM: 94.5
Sample A Female 148.8
Sample B Female 94.5
Sample C Male 146.3
Sample D Male 162.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 364.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 364.4
Samples: 4

Max nTPM: 422.3
Min nTPM: 331.0
Sample A Male 350.3
Sample B Male 353.8
Sample C Female 331.0
Sample D Female 422.3
Hippocampal formation
nTPM: 310.1
Samples: 4

Max nTPM: 345.6
Min nTPM: 272.9
Sample A Male 306.1
Sample B Male 315.7
Sample C Female 345.6
Sample D Female 272.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 19.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 19.3
69817886 Antisense, RP_050510_03_H08, Mouse strain C57BL/6J (56 days, male) 19.3

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