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TISSUE PRIMARY DATA SPINAL CORD Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Tissue proteome
SPINAL CORD - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:512.7 nTPM
HPA:512.7 nTPM
GTEx:555.9 nTPM
FANTOM5:895.2 Scaled Tags Per Million
Pig:139.3 nTPM

SPINAL CORD - HPA Brain RNA-seq
Max nTPM 512.7
Sample id Sample description nTPM
Cervical spinal cord, central gray
nTPM: 509.4
2048 Male, age 55, midline 558.4
1981 Female, age 72, midline 541.9
2816 Male, age 47, midline 492.1
2194 Female, age 79, both hemispheres 491.2
2565 Male, age 75, midline 463.4
Cervical spinal cord, dorsal horn
nTPM: 512.7
2173 Female, age 72, unknown 545.2
2721 Male, age 90, both hemispheres 523.4
2069 Male, age 47, both hemispheres 520.7
2296 Male, age 66, both hemispheres 511.2
1877 Male, age 55, unknown 508.0
2297 Male, age 75, both hemispheres 467.7
Cervical spinal cord, ventral horn
nTPM: 498.1
2098 Female, age 72, unknown 577.4
2809 Male, age 90, both hemispheres 503.3
2295 Male, age 66, both hemispheres 493.1
2068 Male, age 55, unknown 485.2
2480 Male, age 75, both hemispheres 469.8
2820 Female, age 79, both hemispheres 460.0

SPINAL CORD - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 555.9
GTEx sample id Sample description nTPM
Brain - Spinal cord (cervical c-1)
Average nTPM: 555.9
Samples: 159

Max nTPM: 1531.9
Min nTPM: 257.1
Std nTPM: 192.1
Median nTPM: 522.9
GTEX-1JJ6O-0011-R9a-SM-EYYXP 60-69 years, male 1531.9
GTEX-1EKGG-0011-R9a-SM-CMKFV 60-69 years, male 1163.1
GTEX-1LVA9-0011-R9a-SM-EYYWF 50-59 years, male 1155.1
GTEX-1CB4H-0011-R9a-SM-CKZNL 60-69 years, female 1038.7
GTEX-1I19N-0011-R9a-SM-CMKHN 70-79 years, male 989.0
GTEX-15ER7-0011-R9b-SM-6PALF 20-29 years, female 936.8
GTEX-13CIG-0011-R9a-SM-5K7VU 50-59 years, male 933.0
GTEX-1IY9M-0011-R9b-SM-D3L8J 60-69 years, male 922.2
GTEX-1LB8K-0011-R9a-SM-EZ6MP 50-59 years, male 914.2
GTEX-131YS-0011-R9b-SM-5EQLY 60-69 years, female 879.9
GTEX-1GF9V-0011-R9a-SM-CL53K 60-69 years, male 871.4
GTEX-1H1DF-0011-R9b-SM-CM2RN 40-49 years, female 867.2
GTEX-14E7W-0011-R9a-SM-62LE6 70-79 years, male 861.5
GTEX-1GN2E-0011-R9b-SM-9WG7F 60-69 years, male 851.9
GTEX-1R46S-0011-R9a-SM-EZ6N7 60-69 years, female 848.5
GTEX-1A8G7-0011-R9b-SM-7IGQH 60-69 years, male 842.2
GTEX-1MJK2-0011-R9b-SM-EZ6MZ 50-59 years, male 830.6
GTEX-1EH9U-0011-R9b-SM-9WG5T 60-69 years, male 806.1
GTEX-13CZV-0011-R9a-SM-5LZXT 60-69 years, male 790.8
GTEX-QVUS-0011-R9A-SM-3GIJA 60-69 years, female 781.7
GTEX-13OW5-0011-R9b-SM-5O9CL 60-69 years, male 775.7
GTEX-11WQK-0011-R9b-SM-5BC6N 50-59 years, male 739.7
GTEX-1IGQW-0011-R9b-SM-D4P25 60-69 years, male 738.9
GTEX-1BAJH-0011-R9b-SM-7EPIQ 70-79 years, male 727.6
GTEX-131XW-0011-R9a-SM-5N9EO 50-59 years, female 709.0
GTEX-1JN1M-0011-R9a-SM-EZ6MR 60-69 years, female 703.1
GTEX-1HGF4-0011-R9a-SM-ADEH9 60-69 years, male 700.5
GTEX-1HBPI-0011-R9b-SM-ARL76 50-59 years, male 697.2
GTEX-11EMC-0011-R9b-SM-DO921 60-69 years, female 695.4
GTEX-13NZA-0011-R9b-SM-5MR5I 60-69 years, male 691.8
GTEX-1EU9M-0011-R9a-SM-9WG61 60-69 years, male 683.3
GTEX-T5JC-0011-R9A-SM-32PLV 20-29 years, male 682.4
GTEX-16NPV-0011-R9b-SM-79ONF 50-59 years, female 669.4
GTEX-XLM4-0011-R9A-SM-4AT45 60-69 years, male 663.8
GTEX-1H3O1-0011-R9b-SM-CM2SQ 60-69 years, male 657.8
GTEX-14BIL-0011-R9a-SM-5SI7A 50-59 years, male 657.5
GTEX-YJ89-0011-R9a-SM-4SOK7 60-69 years, male 648.6
GTEX-11GSP-0011-R9b-SM-5NQ77 60-69 years, female 639.5
GTEX-QDT8-0011-R9A-SM-CYPRD 30-39 years, female 638.4
GTEX-11ZVC-0011-R9a-SM-57WC5 50-59 years, female 634.4
GTEX-15DDE-0011-R9b-SM-6M46U 50-59 years, female 633.9
GTEX-1HSMO-0011-R9b-SM-CM2T2 60-69 years, male 632.9
GTEX-RU72-0011-R9A-SM-2TF67 50-59 years, female 630.1
GTEX-1HR98-0011-R9b-SM-ARL79 60-69 years, male 622.9
GTEX-1OJC4-0011-R9a-SM-EZ6N1 50-59 years, female 616.1
GTEX-13O1R-0011-R9b-SM-5KM33 60-69 years, male 612.2
GTEX-ZVZQ-0011-R9a-SM-51MRH 60-69 years, female 611.5
GTEX-13FTY-0011-R9b-SM-5KM2U 40-49 years, female 606.5
GTEX-1H1ZS-0011-R9a-SM-CM2SO 70-79 years, male 606.4
GTEX-1KANB-0011-R9b-SM-EZ6MO 50-59 years, male 605.8
GTEX-1F52S-0011-R9a-SM-9WG62 60-69 years, female 605.1
GTEX-12WSH-0011-R9b-SM-5LZUG 50-59 years, male 604.0
GTEX-T6MN-0011-R9A-SM-32QOZ 50-59 years, male 602.0
GTEX-1192X-0011-R9b-SM-DO934 50-59 years, male 598.8
GTEX-1J8EW-0011-R9b-SM-D4P2F 60-69 years, female 591.5
GTEX-13NYS-0011-R9b-SM-5MR44 60-69 years, male 585.2
GTEX-14E6C-0011-R9a-SM-6EU33 40-49 years, male 584.9
GTEX-11ZTS-0011-R9b-SM-DO93Q 60-69 years, female 581.7
GTEX-PWO3-0011-R9A-SM-EVR2V 60-69 years, female 581.7
GTEX-1HBPH-0011-R9a-SM-CMKH3 40-49 years, female 581.4
GTEX-14PJO-0011-R9b-SM-62LE9 60-69 years, male 578.7
GTEX-1H3NZ-0011-R9a-SM-ADEH7 60-69 years, male 578.3
GTEX-1EWIQ-0011-R9a-SM-ARL8L 70-79 years, female 564.3
GTEX-1J8JJ-0011-R9a-SM-ACKVF 60-69 years, female 563.6
GTEX-13FXS-0011-R9a-SM-5K7UI 50-59 years, male 560.9
GTEX-11ONC-0011-R9b-SM-5NQ8J 60-69 years, male 557.6
GTEX-1GN1U-0011-R9b-SM-CMKFW 50-59 years, female 556.7
GTEX-1B8L1-0011-R9b-SM-9WG5U 60-69 years, male 553.4
GTEX-1IDJH-0011-R9a-SM-ADEIN 70-79 years, male 550.7
GTEX-Q2AG-0011-R9A-SM-2HMJ6 40-49 years, female 542.3
GTEX-ZE9C-0011-R9a-SM-4WWCY 60-69 years, male 538.2
GTEX-12126-0011-R9b-SM-5BC6P 20-29 years, male 535.0
GTEX-1LSNL-0011-R9b-SM-EYYWK 50-59 years, male 532.2
GTEX-1RQEC-0011-R9a-SM-EZ6N3 60-69 years, male 531.3
GTEX-13PL6-0011-R9b-SM-5O9CH 40-49 years, female 528.3
GTEX-1JMLX-0011-R9a-SM-EYYXM 50-59 years, male 527.4
GTEX-1F88F-0011-R9b-SM-9WG7L 60-69 years, female 526.8
GTEX-1C6VQ-0011-R9a-SM-7SB85 50-59 years, male 524.3
GTEX-14ABY-0011-R9a-SM-5PNZK 50-59 years, male 523.6
GTEX-11UD2-0011-R9b-SM-DO926 50-59 years, male 522.9
GTEX-11ZUS-0011-R9b-SM-5BC76 30-39 years, male 522.1
GTEX-1CAMQ-0011-R9a-SM-9WG5Z 40-49 years, male 519.8
GTEX-145LU-0011-R9b-SM-5SI66 50-59 years, male 516.8
GTEX-14BIM-0011-R9a-SM-6LLJL 60-69 years, female 513.9
GTEX-1C6VS-0011-R9b-SM-9WG5W 60-69 years, male 510.9
GTEX-1CAV2-0011-R9b-SM-9WG5M 40-49 years, female 507.9
GTEX-13SLX-0011-R9b-SM-5SI6X 50-59 years, female 505.4
GTEX-15DYW-0011-R9b-SM-6PALB 60-69 years, female 504.6
GTEX-ZF28-0011-R9a-SM-4WWDY 60-69 years, male 503.5
GTEX-14JIY-0011-R9a-SM-6EU34 60-69 years, male 501.2
GTEX-1I1GV-0011-R9b-SM-ARZLE 60-69 years, male 496.9
GTEX-13PVQ-0011-R9b-SM-5LU3B 50-59 years, male 492.1
GTEX-1LVAO-0011-R9a-SM-EZ6MY 60-69 years, male 488.3
GTEX-147GR-0011-R9a-SM-5S2UY 60-69 years, male 485.8
GTEX-NL4W-0011-R9a-SM-2I3G1 50-59 years, male 483.1
GTEX-13RTJ-0011-R9a-SM-5Q5AY 60-69 years, male 481.9
GTEX-1H23P-0011-R9a-SM-CM2T1 60-69 years, male 475.9
GTEX-1I1HK-0011-R9a-SM-CMKHK 60-69 years, male 471.9
GTEX-TSE9-0011-R9A-SM-3DB7Q 60-69 years, female 470.5
GTEX-1GZ2Q-0011-R9a-SM-9WG7A 40-49 years, male 469.7
GTEX-13N2G-0011-R9b-SM-5MR4E 60-69 years, male 467.1
GTEX-13N1W-0011-R9b-SM-5MR4R 70-79 years, male 467.0
GTEX-139T4-0011-R9b-SM-5HL6S 50-59 years, female 464.6
GTEX-13X6I-0011-R9b-SM-5PNZJ 60-69 years, male 455.4
GTEX-1A32A-0011-R9b-SM-7MGXD 50-59 years, female 448.7
GTEX-148VJ-0011-R9b-SM-5SI77 70-79 years, male 447.7
GTEX-1H1DG-0011-R9b-SM-ACKVB 70-79 years, male 446.2
GTEX-ZAB4-0011-R9a-SM-4SOKG 40-49 years, male 444.7
GTEX-1ICLZ-0011-R9a-SM-ARL7E 60-69 years, male 444.4
GTEX-1HFI6-0011-R9b-SM-CMKH4 40-49 years, male 442.7
GTEX-13PLJ-0011-R9b-SM-5O9DV 60-69 years, female 438.1
GTEX-1IKJJ-0011-R9a-SM-ARZLI 60-69 years, male 436.5
GTEX-18464-0011-R9a-SM-731BK 50-59 years, male 430.9
GTEX-11DZ1-0011-R9a-SM-DO933 50-59 years, male 430.4
GTEX-NPJ8-0011-R9a-SM-2YUN5 40-49 years, male 430.0
GTEX-OXRO-0011-R9A-SM-3NB1X 60-69 years, female 428.8
GTEX-14BIN-0011-R9a-SM-5SI76 50-59 years, female 426.7
GTEX-1I1GS-0011-R9b-SM-CMKHF 60-69 years, male 426.5
GTEX-13VXU-0011-R9b-SM-5SI73 50-59 years, male 420.6
GTEX-1GZHY-0011-R9a-SM-9WG5R 50-59 years, female 420.5
GTEX-1H2FU-0011-R9b-SM-CE6S4 60-69 years, female 419.3
GTEX-12WSC-0011-R9a-SM-5GU4U 50-59 years, male 414.4
GTEX-15G19-0011-R9b-SM-7KUEE 60-69 years, male 412.2
GTEX-13QJC-0011-R9b-SM-5PNX3 60-69 years, female 410.3
GTEX-15DCD-0011-R9b-SM-7KUED 70-79 years, female 409.6
GTEX-1GZ4I-0011-R9b-SM-B2LY8 50-59 years, male 409.6
GTEX-16Z82-0011-R9a-SM-7DUFA 60-69 years, male 406.1
GTEX-14BMV-0011-R9b-SM-5ZZUA 50-59 years, male 405.3
GTEX-13NYB-0011-R9b-SM-5MR5P 40-49 years, male 397.7
GTEX-1B933-0011-R9a-SM-79OOR 50-59 years, female 395.2
GTEX-139UW-0011-R9b-SM-5LZYT 60-69 years, male 394.3
GTEX-1HBPM-0011-R9b-SM-ARL7C 60-69 years, female 392.6
GTEX-16XZZ-0011-R9b-SM-7DHKX 60-69 years, male 390.2
GTEX-17EVQ-0011-R9b-SM-79OJY 70-79 years, male 388.8
GTEX-14PN4-0011-R9a-SM-6LLH9 50-59 years, male 381.5
GTEX-1J1OQ-0011-R9b-SM-ARZMK 40-49 years, female 381.3
GTEX-WL46-0011-R9A-SM-3MJFP 50-59 years, male 377.6
GTEX-13OVJ-0011-R9b-SM-5L3GD 50-59 years, female 365.9
GTEX-15EO6-0011-R9a-SM-6PALG 50-59 years, male 365.1
GTEX-NPJ7-0011-R9a-SM-2TC5R 60-69 years, female 364.8
GTEX-YFC4-0011-R9a-SM-4SOK4 40-49 years, female 362.4
GTEX-14PJM-0011-R9b-SM-6EU35 50-59 years, female 361.7
GTEX-13FLV-0011-R9b-SM-5L3DA 50-59 years, male 360.0
GTEX-13JUV-0011-R9a-SM-5LZX3 40-49 years, female 351.6
GTEX-12WSD-0011-R9a-SM-5GU6W 60-69 years, female 348.2
GTEX-15CHQ-0011-R9a-SM-6LLHX 60-69 years, male 345.9
GTEX-1I1CD-0011-R9a-SM-CMKHB 60-69 years, female 344.2
GTEX-OHPN-0011-R9A-SM-5TDEJ 60-69 years, female 337.1
GTEX-XMD1-0011-R9A-SM-4AT49 60-69 years, male 334.2
GTEX-13OVL-0011-R9a-SM-5P9GX 50-59 years, male 333.7
GTEX-13SLW-0011-R9a-SM-5O9BT 70-79 years, male 330.1
GTEX-1GF9W-0011-R9b-SM-9WG7J 60-69 years, male 327.5
GTEX-1F6I4-0011-R9a-SM-CMKFU 60-69 years, male 321.1
GTEX-13S7M-0011-R9a-SM-5O9DW 60-69 years, female 319.0
GTEX-RNOR-0011-R9A-SM-2TF52 50-59 years, female 310.2
GTEX-1GN73-0011-R9a-SM-CKZO5 60-69 years, male 303.5
GTEX-1GTWX-0011-R9a-SM-ADEH4 60-69 years, male 284.5
GTEX-QVJO-0011-R9A-SM-2S1QH 60-69 years, female 274.7
GTEX-R55E-0011-R9A-SM-2TC6C 20-29 years, male 257.1
Show allShow less

SPINAL CORD - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 895.2
FANTOM5 sample id Sample description Scaled Tags Per Million
Spinal cord
Scaled Tags Per Million: 895.2
FF:10181-103D1 60 years, female 967.0
FF:10159-103A6 76 years, female 823.4

SPINAL CORD - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 139.3
Pig sample Sample description nTPM
Dorsal spinal cord
nTPM: 89.9
Samples: 4

Max nTPM: 102.6
Min nTPM: 84.8
Sample A Female 85.9
Sample B Female 102.6
Sample C Male 86.2
Sample D Male 84.8
Ventral spinal cord
nTPM: 139.3
Samples: 4

Max nTPM: 149.4
Min nTPM: 129.3
Sample A Female 129.3
Sample B Female 149.4
Sample C Male 141.7
Sample D Male 136.8

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