HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:1242.7 nTPM
HPA:1242.7 nTPM
GTEx:358.2 nTPM
FANTOM5:485.0 Scaled Tags Per Million
Pig:299.3 nTPM
Mouse:933.1 nTPM
Allen mouse:9.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA004469
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 1242.7
Sample id Sample description nTPM
Hippocampus
nTPM: 1086.8
2148 Female, age 91, left hemisphere 1131.0
2621 Female, age 67, right hemisphere 1114.6
1898 Male, age 80, left hemisphere 1094.8
2529 Female, age 94, left hemisphere 1081.2
1911 Female, age 85, right hemisphere 1052.5
1855 Male, age 76, left hemisphere 1046.7
Dentate gyrus
nTPM: 1129.1
2530 Female, age 94, left hemisphere 1247.9
2531 Female, age 67, both hemispheres 1135.6
1927 Female, age 91, both hemispheres 1124.2
2528 Male, age 74, both hemispheres 1121.1
2246 Female, age 85, both hemispheres 1106.9
2010 Male, age 76, both hemispheres 1038.8
Entorhinal gyrus
nTPM: 1237.1
2686 Male, age 75, right hemisphere 1427.6
2764 Male, age 80, right hemisphere 1272.0
2613 Female, age 94, left hemisphere 1243.6
1938 Female, age 85, left hemisphere 1227.5
1787 Male, age 76, left hemisphere 1157.2
2117 Female, age 91, right hemisphere 1095.0
Hippocampus, CA1
nTPM: 1068.0
2749 Male, age 80, left hemisphere 1125.0
1873 Female, age 85, both hemispheres 1077.4
2082 Female, age 91, right hemisphere 1061.2
2527 Male, age 74, both hemispheres 1043.9
2045 Male, age 76, both hemispheres 1032.3
Hippocampus, CA2
nTPM: 1097.5
1892 Male, age 76, both hemispheres 1160.2
2437 Female, age 94, left hemisphere 1143.8
1940 Female, age 85, left hemisphere 1115.4
2249 Male, age 74, both hemispheres 1062.5
1963 Male, age 80, left hemisphere 1054.1
2113 Female, age 91, right hemisphere 1048.9
Hippocampus, CA3
nTPM: 1128.8
2861 Female, age 67, both hemispheres 1471.6
2620 Female, age 94, left hemisphere 1087.2
1891 Female, age 85, both hemispheres 1072.0
1867 Male, age 76, both hemispheres 1065.6
2137 Male, age 80, left hemisphere 1050.8
2436 Male, age 74, both hemispheres 1025.7
Parahippocampal cortex
nTPM: 1242.7
2622 Female, age 67, right hemisphere 1465.7
2532 Female, age 72, left hemisphere 1296.3
2692 Male, age 74, both hemispheres 1269.0
2245 Female, age 91, both hemispheres 1262.8
1850 Male, age 80, both hemispheres 1246.8
2693 Female, age 94, both hemispheres 1216.0
1933 Female, age 85, both hemispheres 1200.2
1990 Female, age 91, right hemisphere 1170.2
2250 Female, age 67, right hemisphere 1164.2
2018 Male, age 76, both hemispheres 1135.6
Perirhinal gyrus
nTPM: 1227.4
1841 Female, age 85, right hemisphere 1329.2
1794 Male, age 80, right hemisphere 1269.3
2848 Male, age 76, right hemisphere 1263.7
1847 Female, age 91, left hemisphere 1170.3
2521 Female, age 94, right hemisphere 1104.7
Subiculum
nTPM: 1129.0
2619 Male, age 74, both hemispheres 1197.2
1977 Female, age 85, both hemispheres 1170.0
2438 Female, age 94, left hemisphere 1147.1
1901 Male, age 80, both hemispheres 1113.4
2729 Female, age 91, right hemisphere 1075.5
2042 Male, age 76, both hemispheres 1071.1

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 358.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 358.2
Samples: 197

Max nTPM: 1582.2
Min nTPM: 49.2
Std nTPM: 244.9
Median nTPM: 283.3
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 1582.2
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 1355.1
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 1245.4
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 1238.7
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 1216.8
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 1057.5
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 980.4
GTEX-13JVG-0011-R1a-SM-5KM32 60-69 years, male 972.1
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 968.8
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 947.9
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 935.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 485.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 485.0
FF:10153-102I9 76 years, female 528.5
FF:10169-103B7 60 years, female 441.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 299.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 139.6
Samples: 4

Max nTPM: 191.2
Min nTPM: 87.8
Sample A Female 160.3
Sample B Female 119.0
Sample C Male 191.2
Sample D Male 87.8
Entorhinal cortex
nTPM: 299.3
Samples: 4

Max nTPM: 318.5
Min nTPM: 290.9
Sample A Female 291.2
Sample B Female 296.7
Sample C Male 290.9
Sample D Male 318.5
Subiculum
nTPM: 245.4
Samples: 4

Max nTPM: 376.4
Min nTPM: 169.2
Sample A Female 376.4
Sample B Female 230.5
Sample C Male 205.5
Sample D Male 169.2
Ventral hippocampus
nTPM: 129.7
Samples: 4

Max nTPM: 158.5
Min nTPM: 109.9
Sample A Female 117.6
Sample B Female 109.9
Sample C Male 158.5
Sample D Male 132.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 933.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 933.1
Samples: 4

Max nTPM: 1071.9
Min nTPM: 747.4
Sample A Male 1071.9
Sample B Male 991.2
Sample C Female 921.8
Sample D Female 747.4
Hippocampal formation
nTPM: 680.7
Samples: 4

Max nTPM: 799.5
Min nTPM: 563.1
Sample A Male 799.5
Sample B Male 633.0
Sample C Female 563.1
Sample D Female 727.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.2
79556603 Antisense, RP_071018_02_A11, Mouse strain C57BL/6J (56 days, male) 9.2
79360322 Antisense, RP_071018_02_A11, Mouse strain C57BL/6J (56 days, male) 8.1

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