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ATP5MPL
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: High
Neuronal cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:295.5 nTPM
FANTOM5:180.4 Scaled Tags Per Million
Pig:127.9 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA058978Antibody HPA060520
Glial cells HighMedium
Neuronal cells HighMedium



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 295.5
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 295.5
Samples: 246

Max nTPM: 822.1
Min nTPM: 104.2
Std nTPM: 108.0
Median nTPM: 288.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 822.1
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 770.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 720.6
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 673.3
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 591.9
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 582.8
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 578.3
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 560.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 533.3
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 519.2
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 518.2
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 514.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 481.3
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 475.7
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 471.7
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 469.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 461.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 451.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 447.8
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 443.4
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 438.2
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 435.6
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 435.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 431.1
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 417.4
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 416.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 413.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 401.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 400.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 399.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 398.4
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 398.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 396.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 396.0
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 389.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 387.9
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 387.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 387.5
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 385.6
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 384.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 379.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 374.4
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 372.3
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 367.7
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 363.5
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 362.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 361.7
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 360.4
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 358.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 357.6
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 356.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 354.9
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 347.9
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 344.2
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 343.3
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 342.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 340.8
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 338.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 337.0
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 335.6
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 335.3
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 333.0
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 330.5
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 329.2
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 328.7
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 326.8
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 326.2
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 325.0
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 322.8
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 321.5
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 321.2
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 319.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 319.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 318.9
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 318.3
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 318.2
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 318.0
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 316.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 316.5
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 315.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 309.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 308.6
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 307.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 307.7
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 306.2
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 305.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 305.4
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 305.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 304.9
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 303.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 303.8
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 303.2
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 302.9
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 302.8
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 302.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 302.3
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 302.2
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 302.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 302.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 301.2
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 300.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 299.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 298.1
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 298.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 297.4
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 296.6
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 295.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 295.4
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 295.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 295.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 294.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 294.6
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 294.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 294.2
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 294.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 293.0
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 291.6
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 291.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 290.9
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 290.1
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 290.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 288.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 288.2
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 288.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 287.4
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 286.3
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 284.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 282.5
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 280.0
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 279.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 279.5
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 279.3
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 278.6
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 277.0
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 276.6
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 276.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 276.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 276.5
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 276.2
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 275.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 275.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 274.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 273.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 273.4
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 272.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 271.6
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 271.2
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 269.4
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 268.8
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 268.2
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 264.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 263.9
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 262.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 261.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 261.0
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 260.8
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 260.6
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 260.4
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 259.8
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 259.1
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 256.8
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 256.6
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 252.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 250.3
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 249.0
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 247.1
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 247.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 246.9
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 246.4
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 243.6
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 243.5
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 242.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 239.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 239.5
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 235.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 233.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 232.6
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 230.2
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 230.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 230.1
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 227.7
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 225.6
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 225.3
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 224.1
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 218.3
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 218.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 217.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 216.4
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 216.3
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 215.4
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 215.3
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 214.7
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 213.6
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 213.3
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 213.0
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 213.0
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 212.3
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 211.3
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 208.0
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 203.2
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 202.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 202.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 201.3
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 197.9
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 196.7
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 192.2
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 192.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 192.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 191.9
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 191.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 188.9
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 187.8
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 186.8
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 185.3
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 185.0
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 183.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 181.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 180.7
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 179.5
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 179.3
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 174.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 173.9
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 173.4
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 172.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 172.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 171.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 171.0
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 170.3
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 169.4
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 168.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 165.7
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 157.5
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 157.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 155.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 154.2
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 154.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 152.0
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 151.2
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 148.7
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 147.2
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 147.2
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 137.2
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 126.7
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 122.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 119.3
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 104.2
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 180.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 180.4
FF:10164-103B2 76 years, female 180.4

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 127.9
Pig sample Sample description nTPM
Caudate
nTPM: 127.9
Samples: 4

Max nTPM: 135.2
Min nTPM: 115.2
Sample A Female 129.2
Sample B Female 135.2
Sample C Male 131.8
Sample D Male 115.2

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