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RPL30
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BRAIN AMYGDALA Show tissue menu
AMYGDALA BASAL GANGLIA CEREBELLUM CEREBRAL CORTEX HIPPOCAMPAL FORMATION HYPOTHALAMUS MEDULLA OBLONGATA MIDBRAIN
OLFACTORY BULB PITUITARY GLAND PONS RETINA SPINAL CORD THALAMUS WHITE MATTER
ANTIBODIES
AND
VALIDATION
Brain proteome
Amygdala
AMYGDALA - Expression summary
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

Protein expressioni

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
No data
RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
Consensus:1542.9 nTPM
HPA:1542.9 nTPM
GTEx:1490.0 nTPM
FANTOM5:324.7 Scaled Tags Per Million
Pig:67.9 nTPM
Mouse:408.9 nTPM
Allen mouse:4.8 Expression energy

AMYGDALA - HPA Brain RNA-seq
Max nTPM 1542.9
Sample id Sample description nTPM
Amygdala
nTPM: 1542.9
2695 Female, age 67, right hemisphere 1624.4
2514 Male, age 75, right hemisphere 1542.0
2814 Male, age 76, right hemisphere 1532.8
1987 Female, age 91, left hemisphere 1511.5
2517 Female, age 94, left hemisphere 1503.8
Basal amygdala
nTPM: 1503.5
2827 Female, age 67, right hemisphere 1588.0
2609 Male, age 75, right hemisphere 1512.9
2685 Female, age 94, left hemisphere 1490.9
2110 Male, age 80, left hemisphere 1487.3
1955 Male, age 76, both hemispheres 1485.4
2243 Female, age 91, right hemisphere 1456.3
Central amygdala
nTPM: 1516.1
2826 Female, age 94, left hemisphere 1639.9
2515 Male, age 75, right hemisphere 1505.5
1905 Male, age 76, both hemispheres 1487.4
2239 Male, age 80, left hemisphere 1479.0
2701 Female, age 91, right hemisphere 1468.7
Corticomedial amygdala
nTPM: 1487.5
2428 Male, age 75, right hemisphere 1508.1
2535 Female, age 67, right hemisphere 1506.9
2240 Male, age 76, both hemispheres 1486.6
2429 Female, age 94, left hemisphere 1482.0
2829 Male, age 80, left hemisphere 1477.8
2242 Female, age 91, right hemisphere 1463.5
Lateral amygdala
nTPM: 1530.0
2830 Female, age 67, right hemisphere 1631.4
2516 Male, age 75, right hemisphere 1583.1
2534 Female, age 94, left hemisphere 1548.3
2256 Male, age 80, left hemisphere 1489.0
1883 Male, age 76, both hemispheres 1480.2
2255 Female, age 91, right hemisphere 1447.8
Stria terminalis, bed nucleus
nTPM: 1453.0
1974 Female, age 91, both hemispheres 1477.3
2201 Male, age 74, unknown 1455.9
2486 Female, age 94, both hemispheres 1425.7

AMYGDALA - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 1490.0
GTEx sample id Sample description nTPM
Brain - Amygdala
Average nTPM: 1490.0
Samples: 152

Max nTPM: 4701.4
Min nTPM: 638.2
Std nTPM: 650.1
Median nTPM: 1332.8
GTEX-14JFF-0011-R4a-SM-5ZZV5 60-69 years, male 4701.4
GTEX-147GR-0011-R4a-SM-5S2V2 60-69 years, male 4186.1
GTEX-12WSH-0011-R4a-SM-5GU6K 50-59 years, male 3379.7
GTEX-11ZU8-0011-R4a-SM-5BC6Y 60-69 years, male 3347.3
GTEX-1H2FU-0011-R4a-SM-CL551 60-69 years, female 3285.0
GTEX-14JG1-0011-R4b-SM-62LEB 40-49 years, male 3202.6
GTEX-145MI-0011-R4b-SM-5PNZH 60-69 years, female 2943.0
GTEX-1H1CY-0011-R4b-SM-CJI3G 60-69 years, female 2793.6
GTEX-17HG3-0011-R4a-SM-7IGLL 30-39 years, female 2758.5
GTEX-1JJEA-0011-R4a-SM-EXUTC 60-69 years, male 2748.3
GTEX-14E7W-0011-R4b-SM-62LEA 70-79 years, male 2634.2
GTEX-1GZ4I-0011-R4a-SM-9QEI9 50-59 years, male 2531.1
GTEX-183WM-0011-R4a-SM-7LG6S 70-79 years, female 2437.7
GTEX-1F75A-0011-R4a-SM-ARL8J 50-59 years, male 2267.0
GTEX-1C6VR-0011-R4b-SM-9QEGZ 60-69 years, male 2252.7
GTEX-1JN6P-0011-R4a-SM-EZ6MS 60-69 years, male 2163.6
GTEX-ZE9C-0011-R4a-SM-4WKH6 60-69 years, male 2154.0
GTEX-1CB4G-0011-R4b-SM-CJI28 60-69 years, male 2084.3
GTEX-1JMQJ-0011-R4b-SM-EXUT8 50-59 years, male 2068.6
GTEX-13OW6-0011-R4a-SM-5O9DX 50-59 years, male 2030.0
GTEX-1J8Q2-0011-R4a-SM-ADEHA 60-69 years, male 2004.3
GTEX-12ZZW-0011-R4a-SM-5DUX9 50-59 years, male 1997.0
GTEX-12ZZZ-0011-R4b-SM-5DUV7 60-69 years, male 1993.4
GTEX-1C6WA-0011-R4a-SM-9QEH2 60-69 years, male 1984.8
GTEX-1LVAO-0011-R4a-SM-EXURO 60-69 years, male 1984.3
GTEX-Y8DK-0011-R4A-SM-EXUR1 60-69 years, male 1973.5
GTEX-1GF9W-0011-R4a-SM-CE6RH 60-69 years, male 1962.3
GTEX-OHPN-0011-R4A-SM-2I5FD 60-69 years, female 1932.6
GTEX-1N2DW-0011-R4b-SM-EZ6MD 50-59 years, male 1887.4
GTEX-15DDE-0011-R4b-SM-7KULI 50-59 years, female 1865.1
GTEX-13OVL-0011-R4b-SM-5L3HV 50-59 years, male 1860.0
GTEX-13JVG-0011-R4a-SM-5MR4C 60-69 years, male 1818.6
GTEX-1I1GR-0011-R4a-SM-CMKHC 60-69 years, male 1817.4
GTEX-17EVQ-0011-R4b-SM-7LT94 70-79 years, male 1782.4
GTEX-1H23P-0011-R4b-SM-CL54R 60-69 years, male 1765.1
GTEX-QVUS-0011-R4A-SM-3GAE7 60-69 years, female 1743.8
GTEX-N7MS-0011-R4a-SM-2HMKW 60-69 years, male 1742.9
GTEX-18464-0011-R4a-SM-7LG6T 50-59 years, male 1742.1
GTEX-1E1VI-0011-R4b-SM-9QEHV 50-59 years, male 1725.4
GTEX-1J1OQ-0011-R4a-SM-D4P2A 40-49 years, female 1708.0
GTEX-11TTK-0011-R4a-SM-DNZZU 60-69 years, female 1668.8
GTEX-13NYB-0011-R4b-SM-9QEGJ 40-49 years, male 1635.2
GTEX-14PJM-0011-R4a-SM-5YYAS 50-59 years, female 1625.0
GTEX-13FLV-0011-R4a-SM-5LZYU 50-59 years, male 1616.2
GTEX-14DAQ-0011-R4a-SM-5YYAI 60-69 years, female 1608.8
GTEX-17F97-0011-R4b-SM-7KFS2 50-59 years, male 1596.9
GTEX-13OVH-0011-R4a-SM-5KM3W 70-79 years, male 1589.8
GTEX-139T8-0011-R4a-SM-5HL54 60-69 years, male 1589.2
GTEX-1EX96-0011-R4a-SM-ARU82 50-59 years, male 1574.0
GTEX-13PVQ-0011-R4a-SM-5O9CT 50-59 years, male 1572.3
GTEX-11ONC-0011-R4b-SM-DO93H 60-69 years, male 1550.9
GTEX-13SLX-0011-R4a-SM-5O9BJ 50-59 years, female 1523.9
GTEX-QMR6-0011-R4A-SM-32PKU 50-59 years, male 1517.3
GTEX-1CB4J-0011-R4b-SM-9WG5P 60-69 years, male 1510.7
GTEX-144GL-0011-R4a-SM-5PNUI 50-59 years, male 1508.9
GTEX-1J8EW-0011-R4b-SM-ARU89 60-69 years, female 1504.6
GTEX-1N2EE-0011-R4a-SM-EXOII 60-69 years, male 1465.9
GTEX-1F7RK-0011-R4b-SM-9QEI7 20-29 years, female 1456.2
GTEX-1H1DG-0011-R4a-SM-CE6RQ 70-79 years, male 1455.3
GTEX-13CZV-0011-R4b-SM-5J2NY 60-69 years, male 1452.1
GTEX-1F6IF-0011-R4b-SM-CKZNJ 60-69 years, male 1449.5
GTEX-14JIY-0011-R4b-SM-5ZZV7 60-69 years, male 1438.8
GTEX-1ICLZ-0011-R4a-SM-CMKHL 60-69 years, male 1435.8
GTEX-1LSVX-0011-R4b-SM-EXURP 60-69 years, male 1431.7
GTEX-12WSA-0011-R4a-SM-57WB7 60-69 years, male 1425.0
GTEX-11PRG-0011-R4a-SM-DNZZR 50-59 years, male 1417.5
GTEX-11ZVC-0011-R4a-SM-5BC6Z 50-59 years, female 1413.8
GTEX-1445S-0011-R4a-SM-5PNWN 60-69 years, male 1397.0
GTEX-UTHO-0011-R4A-SM-3GIJP 60-69 years, male 1395.5
GTEX-15ER7-0011-R4a-SM-6M46S 20-29 years, female 1377.8
GTEX-N7MT-0011-R4a-SM-2I3G9 60-69 years, female 1362.9
GTEX-13O3Q-0011-R4a-SM-5P9H2 50-59 years, male 1353.6
GTEX-1GMR8-0011-R4a-SM-9OSX1 50-59 years, female 1344.9
GTEX-13QIC-0011-R4a-SM-5PNX8 60-69 years, female 1339.6
GTEX-13112-0011-R4b-SM-5DUXL 50-59 years, male 1338.0
GTEX-13OW8-0011-R4a-SM-9WG6V 60-69 years, male 1335.2
GTEX-13OW7-0011-R4b-SM-5O9CX 50-59 years, male 1330.4
GTEX-NL4W-0011-R4a-SM-2I5GZ 50-59 years, male 1321.6
GTEX-1399T-0011-R4b-SM-5DUVX 60-69 years, male 1317.3
GTEX-16YQH-0011-R4a-SM-7EPGI 30-39 years, male 1316.1
GTEX-13X6J-0011-R4b-SM-5P9K4 50-59 years, male 1302.9
GTEX-P44H-0011-R4A-SM-2XCEW 40-49 years, male 1287.7
GTEX-RNOR-0011-R4A-SM-3GAD3 50-59 years, female 1281.1
GTEX-ZAB4-0011-R4a-SM-4SOKB 40-49 years, male 1273.2
GTEX-13NYS-0011-R4b-SM-5MR3O 60-69 years, male 1272.8
GTEX-WHSE-0011-R4A-SM-3P5ZN 20-29 years, male 1259.9
GTEX-12WSF-0011-R4b-SM-5HL88 70-79 years, male 1239.6
GTEX-1HBPI-0011-R4a-SM-CJI3K 50-59 years, male 1239.5
GTEX-NPJ7-0011-R4a-SM-2I3GJ 60-69 years, female 1235.0
GTEX-ZAK1-0011-R4a-SM-6AJBK 50-59 years, female 1228.1
GTEX-X4XX-0011-R4B-SM-46MWL 60-69 years, male 1227.0
GTEX-1GTWX-0011-R4a-SM-C1YQI 60-69 years, male 1217.5
GTEX-13O3O-0011-R4b-SM-5KM3F 60-69 years, female 1212.6
GTEX-15CHQ-0011-R4a-SM-686ZX 60-69 years, male 1194.3
GTEX-1B8L1-0011-R4a-SM-7EWFJ 60-69 years, male 1186.2
GTEX-X585-0011-R4B-SM-46MVH 50-59 years, male 1181.1
GTEX-15EO6-0011-R4a-SM-7KUKZ 50-59 years, male 1171.1
GTEX-NL3H-0011-R4a-SM-2I3GK 60-69 years, male 1166.7
GTEX-1EMGI-0011-R4b-SM-CJI2D 60-69 years, male 1159.7
GTEX-1HB9E-0011-R4b-SM-ARZLS 50-59 years, male 1154.9
GTEX-13X6I-0011-R4b-SM-5PNU9 60-69 years, male 1151.8
GTEX-13SLW-0011-R4b-SM-5S2W2 70-79 years, male 1150.5
GTEX-WVLH-0011-R4A-SM-3MJFS 50-59 years, male 1147.2
GTEX-1GN73-0011-R4b-SM-9QEIK 60-69 years, male 1134.9
GTEX-17EVP-0011-R4a-SM-79OML 40-49 years, male 1128.9
GTEX-T5JC-0011-R4A-SM-32PLT 20-29 years, male 1112.4
GTEX-1H1ZS-0011-R4b-SM-CKZO7 70-79 years, male 1106.2
GTEX-T6MN-0011-R4A-SM-32QPG 50-59 years, male 1103.3
GTEX-12WSD-0011-R4b-SM-5LZUA 60-69 years, female 1102.8
GTEX-NPJ8-0011-R4a-SM-2HML3 40-49 years, male 1102.3
GTEX-1HBPH-0011-R4a-SM-A96RX 40-49 years, female 1091.9
GTEX-15SHU-0011-R4b-SM-7IGLC 40-49 years, female 1080.8
GTEX-13X6K-0011-R4b-SM-5P9HO 60-69 years, female 1067.5
GTEX-1313W-0011-R4b-SM-5KLZV 50-59 years, female 1047.4
GTEX-11NUK-0011-R4a-SM-DO12B 50-59 years, male 1047.1
GTEX-1F48J-0011-R4b-SM-9OSVX 50-59 years, female 1046.3
GTEX-131XH-0011-R4b-SM-5DUWB 50-59 years, male 1040.1
GTEX-1IY9M-0011-R4a-SM-C1YQ2 60-69 years, male 1038.6
GTEX-TSE9-0011-R4A-SM-3DB7H 60-69 years, female 1027.8
GTEX-QDT8-0011-R4A-SM-32PKM 30-39 years, female 1017.2
GTEX-ZVZQ-0011-R4b-SM-57WCZ 60-69 years, female 1016.0
GTEX-13RTJ-0011-R4b-SM-5PNX1 60-69 years, male 1013.5
GTEX-1H3O1-0011-R4b-SM-A9SKE 60-69 years, male 1003.1
GTEX-13N1W-0011-R4a-SM-5MR52 70-79 years, male 997.9
GTEX-14BIM-0011-R4b-SM-5S2RK 60-69 years, female 996.9
GTEX-14PN4-0011-R4a-SM-686ZT 50-59 years, male 990.4
GTEX-14PQA-0011-R4b-SM-6AJBU 50-59 years, female 966.6
GTEX-X4EP-0011-R4B-SM-3P627 60-69 years, female 963.0
GTEX-QVJO-0011-R4A-SM-2S1QL 60-69 years, female 957.9
GTEX-15DYW-0011-R4a-SM-6M46V 60-69 years, female 957.6
GTEX-145LS-0011-R4b-SM-5S2UT 60-69 years, female 950.0
GTEX-14ASI-0011-R4a-SM-69LQ4 60-69 years, male 949.4
GTEX-13OVJ-0011-R4b-SM-5P9H5 50-59 years, female 948.5
GTEX-15DCD-0011-R4a-SM-69LPB 70-79 years, female 945.3
GTEX-YFC4-0011-R4a-SM-4RGLQ 40-49 years, female 940.7
GTEX-1B996-0011-R4b-SM-9OSVO 60-69 years, male 930.4
GTEX-1HFI6-0011-R4b-SM-A96RT 40-49 years, male 918.2
GTEX-1A3MX-0011-R4b-SM-7EWFK 60-69 years, male 914.4
GTEX-14ABY-0011-R4b-SM-5S2VN 50-59 years, male 903.9
GTEX-131YS-0011-R4a-SM-5DUVL 60-69 years, female 874.5
GTEX-1H3NZ-0011-R4a-SM-CL54T 60-69 years, male 862.7
GTEX-13OW5-0011-R4b-SM-5L3HS 60-69 years, male 857.3
GTEX-XLM4-0011-R4B-SM-4AT5C 60-69 years, male 822.7
GTEX-1AX9I-0011-R4b-SM-7EPIB 60-69 years, male 797.8
GTEX-13VXU-0011-R4b-SM-5O9CI 50-59 years, male 796.7
GTEX-1HCU6-0011-R4b-SM-ARU74 60-69 years, female 792.0
GTEX-13N2G-0011-R4b-SM-5MR54 60-69 years, male 786.1
GTEX-Q2AG-0011-R4A-SM-2HMKA 40-49 years, female 769.3
GTEX-R55E-0011-R4A-SM-2TC5H 20-29 years, male 733.2
GTEX-P44G-0011-R4A-SM-2I3FB 30-39 years, male 715.7
GTEX-S7SE-0011-R4A-SM-2XCDB 50-59 years, male 704.7
GTEX-WZTO-0011-R4A-SM-3NMC7 40-49 years, male 638.2
Show allShow less

AMYGDALA - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 324.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Amygdala
Scaled Tags Per Million: 324.7
FF:10151-102I7 76 years, female 324.7

AMYGDALA - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 67.9
Pig sample Sample description nTPM
Amygdala
nTPM: 67.9
Samples: 4

Max nTPM: 84.4
Min nTPM: 41.4
Sample A Female 84.1
Sample B Female 84.4
Sample C Male 61.7
Sample D Male 41.4

AMYGDALA - Mouse RNA-seqi

RNA-seq data obtained from mouse brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 408.9
Mouse sample Sample description nTPM
Amygdala
nTPM: 408.9
Samples: 4

Max nTPM: 439.6
Min nTPM: 386.1
Sample A Male 386.1
Sample B Male 403.7
Sample C Female 439.6
Sample D Female 406.2

AMYGDALA - Allen Mouse ISHi

In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.

Read more
Max Expression energy 4.8
Allen experiment id Experiment description Expression energy
Cortical subplate
Expression energy: 4.8
100143515 Antisense, RP_110407_01_E05, Mouse strain C57BL/6J (56 days, male) 4.8

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