HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:1501.7 nTPM
HPA:1501.7 nTPM
GTEx:1216.2 nTPM
FANTOM5:305.1 Scaled Tags Per Million
Pig:81.5 nTPM
Mouse:444.8 nTPM
Allen mouse:6.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA002651
Glial cells Not detected
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 1501.7
Sample id Sample description nTPM
Hippocampus
nTPM: 1494.9
2529 Female, age 94, left hemisphere 1515.2
1898 Male, age 80, left hemisphere 1507.5
2621 Female, age 67, right hemisphere 1499.9
1911 Female, age 85, right hemisphere 1497.3
1855 Male, age 76, left hemisphere 1491.7
2148 Female, age 91, left hemisphere 1457.8
Dentate gyrus
nTPM: 1489.3
2530 Female, age 94, left hemisphere 1534.9
2010 Male, age 76, both hemispheres 1518.2
2246 Female, age 85, both hemispheres 1494.8
2531 Female, age 67, both hemispheres 1482.9
1927 Female, age 91, both hemispheres 1453.4
2528 Male, age 74, both hemispheres 1451.6
Entorhinal gyrus
nTPM: 1482.9
2686 Male, age 75, right hemisphere 1530.5
2117 Female, age 91, right hemisphere 1492.7
1787 Male, age 76, left hemisphere 1490.1
2764 Male, age 80, right hemisphere 1473.0
1938 Female, age 85, left hemisphere 1469.6
2613 Female, age 94, left hemisphere 1441.6
Hippocampus, CA1
nTPM: 1474.2
2045 Male, age 76, both hemispheres 1483.6
2527 Male, age 74, both hemispheres 1481.9
2082 Female, age 91, right hemisphere 1477.5
1873 Female, age 85, both hemispheres 1472.3
2749 Male, age 80, left hemisphere 1455.9
Hippocampus, CA2
nTPM: 1481.1
2437 Female, age 94, left hemisphere 1498.3
1940 Female, age 85, left hemisphere 1487.6
1892 Male, age 76, both hemispheres 1483.0
1963 Male, age 80, left hemisphere 1479.6
2113 Female, age 91, right hemisphere 1472.2
2249 Male, age 74, both hemispheres 1465.6
Hippocampus, CA3
nTPM: 1461.1
1891 Female, age 85, both hemispheres 1508.8
1867 Male, age 76, both hemispheres 1495.6
2861 Female, age 67, both hemispheres 1453.4
2436 Male, age 74, both hemispheres 1448.5
2137 Male, age 80, left hemisphere 1446.2
2620 Female, age 94, left hemisphere 1414.0
Parahippocampal cortex
nTPM: 1472.6
2018 Male, age 76, both hemispheres 1539.5
2692 Male, age 74, both hemispheres 1485.3
2532 Female, age 72, left hemisphere 1479.3
1850 Male, age 80, both hemispheres 1475.2
2245 Female, age 91, both hemispheres 1472.2
1990 Female, age 91, right hemisphere 1470.3
1933 Female, age 85, both hemispheres 1468.8
2250 Female, age 67, right hemisphere 1462.9
2622 Female, age 67, right hemisphere 1440.0
2693 Female, age 94, both hemispheres 1432.7
Perirhinal gyrus
nTPM: 1473.2
1841 Female, age 85, right hemisphere 1484.8
1847 Female, age 91, left hemisphere 1477.3
1794 Male, age 80, right hemisphere 1474.9
2848 Male, age 76, right hemisphere 1472.8
2521 Female, age 94, right hemisphere 1456.3
Subiculum
nTPM: 1501.7
2042 Male, age 76, both hemispheres 1542.6
2438 Female, age 94, left hemisphere 1540.5
1977 Female, age 85, both hemispheres 1501.4
1901 Male, age 80, both hemispheres 1493.8
2619 Male, age 74, both hemispheres 1468.9
2729 Female, age 91, right hemisphere 1463.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 1216.2
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 1216.2
Samples: 197

Max nTPM: 3285.2
Min nTPM: 441.4
Std nTPM: 465.3
Median nTPM: 1090.0
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 3285.2
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 2689.9
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 2673.3
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 2623.5
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 2564.5
GTEX-145LU-0011-R1a-SM-5Q5CE 50-59 years, male 2350.1
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 2307.9
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 2276.4
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 2234.6
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 2215.0
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 2108.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 305.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 305.1
FF:10153-102I9 76 years, female 324.5
FF:10169-103B7 60 years, female 285.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 81.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 81.5
Samples: 4

Max nTPM: 123.7
Min nTPM: 52.7
Sample A Female 123.7
Sample B Female 70.0
Sample C Male 79.5
Sample D Male 52.7
Entorhinal cortex
nTPM: 72.0
Samples: 4

Max nTPM: 96.0
Min nTPM: 49.5
Sample A Female 62.3
Sample B Female 96.0
Sample C Male 80.3
Sample D Male 49.5
Subiculum
nTPM: 67.7
Samples: 4

Max nTPM: 108.1
Min nTPM: 46.4
Sample A Female 108.1
Sample B Female 61.1
Sample C Male 46.4
Sample D Male 55.0
Ventral hippocampus
nTPM: 69.2
Samples: 4

Max nTPM: 82.4
Min nTPM: 61.4
Sample A Female 82.4
Sample B Female 61.4
Sample C Male 71.4
Sample D Male 61.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 444.8
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 414.5
Samples: 4

Max nTPM: 446.4
Min nTPM: 386.5
Sample A Male 421.0
Sample B Male 404.2
Sample C Female 446.4
Sample D Female 386.5
Hippocampal formation
nTPM: 444.8
Samples: 4

Max nTPM: 512.8
Min nTPM: 364.5
Sample A Male 512.8
Sample B Male 441.0
Sample C Female 460.8
Sample D Female 364.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.7
100143515 Antisense, RP_110407_01_E05, Mouse strain C57BL/6J (56 days, male) 6.7

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