HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:10.9 nTPM
HPA:10.9 nTPM
GTEx:16.6 nTPM
FANTOM5:14.0 Scaled Tags Per Million
Pig:11.6 nTPM
Mouse:18.6 nTPM
Allen mouse:0.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA030611Antibody CAB003764
Glial cells Not detectedNot detected
Neuronal cells Not detectedNot detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 10.9
Sample id Sample description nTPM
Hippocampus
nTPM: 10.4
1898 Male, age 80, left hemisphere 10.9
1911 Female, age 85, right hemisphere 10.5
1855 Male, age 76, left hemisphere 10.4
2148 Female, age 91, left hemisphere 10.3
2621 Female, age 67, right hemisphere 10.2
2529 Female, age 94, left hemisphere 9.9
Dentate gyrus
nTPM: 10.3
1927 Female, age 91, both hemispheres 10.8
2010 Male, age 76, both hemispheres 10.8
2246 Female, age 85, both hemispheres 10.4
2528 Male, age 74, both hemispheres 10.1
2530 Female, age 94, left hemisphere 10.0
2531 Female, age 67, both hemispheres 9.5
Entorhinal gyrus
nTPM: 10.5
2764 Male, age 80, right hemisphere 10.9
2686 Male, age 75, right hemisphere 10.7
1938 Female, age 85, left hemisphere 10.6
2613 Female, age 94, left hemisphere 10.5
1787 Male, age 76, left hemisphere 10.4
2117 Female, age 91, right hemisphere 10.0
Hippocampus, CA1
nTPM: 10.7
2749 Male, age 80, left hemisphere 11.2
2082 Female, age 91, right hemisphere 10.9
1873 Female, age 85, both hemispheres 10.7
2045 Male, age 76, both hemispheres 10.4
2527 Male, age 74, both hemispheres 10.3
Hippocampus, CA2
nTPM: 10.6
1892 Male, age 76, both hemispheres 11.6
2249 Male, age 74, both hemispheres 11.2
1963 Male, age 80, left hemisphere 10.7
1940 Female, age 85, left hemisphere 10.3
2113 Female, age 91, right hemisphere 10.3
2437 Female, age 94, left hemisphere 9.3
Hippocampus, CA3
nTPM: 10.9
2436 Male, age 74, both hemispheres 13.4
2137 Male, age 80, left hemisphere 10.7
1891 Female, age 85, both hemispheres 10.5
1867 Male, age 76, both hemispheres 10.4
2620 Female, age 94, left hemisphere 10.0
2861 Female, age 67, both hemispheres 9.9
Parahippocampal cortex
nTPM: 10.5
1990 Female, age 91, right hemisphere 11.0
1933 Female, age 85, both hemispheres 10.9
2250 Female, age 67, right hemisphere 10.8
2692 Male, age 74, both hemispheres 10.8
1850 Male, age 80, both hemispheres 10.7
2622 Female, age 67, right hemisphere 10.6
2693 Female, age 94, both hemispheres 10.5
2245 Female, age 91, both hemispheres 10.2
2018 Male, age 76, both hemispheres 9.9
2532 Female, age 72, left hemisphere 9.8
Perirhinal gyrus
nTPM: 10.7
1847 Female, age 91, left hemisphere 11.2
1794 Male, age 80, right hemisphere 10.7
1841 Female, age 85, right hemisphere 10.7
2521 Female, age 94, right hemisphere 10.7
2848 Male, age 76, right hemisphere 10.2
Subiculum
nTPM: 10.2
1901 Male, age 80, both hemispheres 10.7
2619 Male, age 74, both hemispheres 10.7
2729 Female, age 91, right hemisphere 10.7
1977 Female, age 85, both hemispheres 10.4
2042 Male, age 76, both hemispheres 9.6
2438 Female, age 94, left hemisphere 9.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 16.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 16.6
Samples: 197

Max nTPM: 26.8
Min nTPM: 10.2
Std nTPM: 2.7
Median nTPM: 16.5
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 26.8
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 22.9
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 22.6
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 22.3
GTEX-TSE9-0011-R1A-SM-3DB7E 60-69 years, female 22.1
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 21.9
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 21.9
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 21.9
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 21.8
GTEX-1I1GS-0011-R1a-SM-CJI43 60-69 years, male 21.3
GTEX-1J1OQ-0011-R1a-SM-A9G1Z 40-49 years, female 21.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 14.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 14.0
FF:10153-102I9 76 years, female 16.5
FF:10169-103B7 60 years, female 11.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 11.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 11.6
Samples: 4

Max nTPM: 13.5
Min nTPM: 9.5
Sample A Female 13.5
Sample B Female 10.1
Sample C Male 13.2
Sample D Male 9.5
Entorhinal cortex
nTPM: 11.5
Samples: 4

Max nTPM: 14.1
Min nTPM: 9.6
Sample A Female 11.9
Sample B Female 14.1
Sample C Male 10.2
Sample D Male 9.6
Subiculum
nTPM: 9.4
Samples: 4

Max nTPM: 10.6
Min nTPM: 8.6
Sample A Female 9.9
Sample B Female 8.6
Sample C Male 10.6
Sample D Male 8.6
Ventral hippocampus
nTPM: 10.7
Samples: 4

Max nTPM: 12.0
Min nTPM: 8.4
Sample A Female 10.9
Sample B Female 8.4
Sample C Male 11.4
Sample D Male 12.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 18.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 17.6
Samples: 4

Max nTPM: 18.2
Min nTPM: 16.8
Sample A Male 17.8
Sample B Male 17.6
Sample C Female 18.2
Sample D Female 16.8
Hippocampal formation
nTPM: 18.7
Samples: 4

Max nTPM: 20.9
Min nTPM: 15.8
Sample A Male 15.8
Sample B Male 18.1
Sample C Female 19.8
Sample D Female 20.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.7
513245 Antisense, RP_040810_01_E01, Mouse strain C57BL/6J (56 days, male) 0.7

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