HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:22.9 nTPM
HPA:22.9 nTPM
GTEx:24.8 nTPM
FANTOM5:20.9 Scaled Tags Per Million
Pig:11.2 nTPM
Mouse:12.7 nTPM
Allen mouse:14.8 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA044117
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 22.9
Sample id Sample description nTPM
Hippocampus
nTPM: 21.4
2621 Female, age 67, right hemisphere 28.1
2529 Female, age 94, left hemisphere 23.9
2148 Female, age 91, left hemisphere 22.8
1911 Female, age 85, right hemisphere 20.3
1855 Male, age 76, left hemisphere 18.2
1898 Male, age 80, left hemisphere 15.0
Dentate gyrus
nTPM: 20.5
2531 Female, age 67, both hemispheres 29.4
2530 Female, age 94, left hemisphere 24.9
2246 Female, age 85, both hemispheres 18.4
2528 Male, age 74, both hemispheres 17.4
1927 Female, age 91, both hemispheres 17.0
2010 Male, age 76, both hemispheres 15.7
Entorhinal gyrus
nTPM: 19.1
2686 Male, age 75, right hemisphere 22.7
2117 Female, age 91, right hemisphere 21.8
2613 Female, age 94, left hemisphere 19.7
2764 Male, age 80, right hemisphere 18.3
1787 Male, age 76, left hemisphere 17.2
1938 Female, age 85, left hemisphere 15.2
Hippocampus, CA1
nTPM: 16.8
2527 Male, age 74, both hemispheres 18.9
2045 Male, age 76, both hemispheres 18.5
2082 Female, age 91, right hemisphere 17.4
1873 Female, age 85, both hemispheres 15.7
2749 Male, age 80, left hemisphere 13.5
Hippocampus, CA2
nTPM: 16.2
2437 Female, age 94, left hemisphere 19.3
2113 Female, age 91, right hemisphere 17.9
1892 Male, age 76, both hemispheres 16.4
1940 Female, age 85, left hemisphere 16.0
1963 Male, age 80, left hemisphere 14.1
2249 Male, age 74, both hemispheres 13.8
Hippocampus, CA3
nTPM: 22.9
2861 Female, age 67, both hemispheres 39.1
2620 Female, age 94, left hemisphere 29.1
1867 Male, age 76, both hemispheres 18.9
2137 Male, age 80, left hemisphere 18.4
1891 Female, age 85, both hemispheres 17.3
2436 Male, age 74, both hemispheres 14.6
Parahippocampal cortex
nTPM: 18.2
2622 Female, age 67, right hemisphere 24.6
2245 Female, age 91, both hemispheres 23.4
2692 Male, age 74, both hemispheres 21.1
2532 Female, age 72, left hemisphere 20.1
2693 Female, age 94, both hemispheres 17.3
1933 Female, age 85, both hemispheres 16.1
2250 Female, age 67, right hemisphere 15.7
2018 Male, age 76, both hemispheres 15.0
1990 Female, age 91, right hemisphere 14.9
1850 Male, age 80, both hemispheres 13.9
Perirhinal gyrus
nTPM: 14.4
2521 Female, age 94, right hemisphere 16.1
2848 Male, age 76, right hemisphere 14.6
1841 Female, age 85, right hemisphere 14.3
1794 Male, age 80, right hemisphere 14.1
1847 Female, age 91, left hemisphere 12.6
Subiculum
nTPM: 19.2
2438 Female, age 94, left hemisphere 22.1
2619 Male, age 74, both hemispheres 20.3
2042 Male, age 76, both hemispheres 20.0
1901 Male, age 80, both hemispheres 18.8
1977 Female, age 85, both hemispheres 17.0
2729 Female, age 91, right hemisphere 16.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 24.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 24.8
Samples: 197

Max nTPM: 49.1
Min nTPM: 9.0
Std nTPM: 6.2
Median nTPM: 23.7
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 49.1
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 44.9
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 41.7
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 41.4
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 38.7
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 38.7
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 38.5
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 38.3
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 36.3
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 36.2
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 36.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 20.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 20.9
FF:10153-102I9 76 years, female 30.4
FF:10169-103B7 60 years, female 11.5

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 11.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 10.5
Samples: 4

Max nTPM: 12.0
Min nTPM: 9.1
Sample A Female 12.0
Sample B Female 9.8
Sample C Male 11.2
Sample D Male 9.1
Entorhinal cortex
nTPM: 10.1
Samples: 4

Max nTPM: 11.0
Min nTPM: 9.0
Sample A Female 11.0
Sample B Female 9.0
Sample C Male 10.6
Sample D Male 9.8
Subiculum
nTPM: 10.5
Samples: 4

Max nTPM: 12.6
Min nTPM: 8.7
Sample A Female 12.6
Sample B Female 8.7
Sample C Male 11.0
Sample D Male 9.6
Ventral hippocampus
nTPM: 11.2
Samples: 4

Max nTPM: 14.5
Min nTPM: 8.6
Sample A Female 10.2
Sample B Female 8.6
Sample C Male 14.5
Sample D Male 11.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 12.7
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 12.6
Samples: 4

Max nTPM: 15.0
Min nTPM: 10.2
Sample A Male 15.0
Sample B Male 10.2
Sample C Female 10.8
Sample D Female 14.3
Hippocampal formation
nTPM: 12.7
Samples: 4

Max nTPM: 15.2
Min nTPM: 9.1
Sample A Male 9.1
Sample B Male 15.2
Sample C Female 13.5
Sample D Female 13.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 14.8
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 14.8
2209 Antisense, RP_040507_02_D02, Mouse strain C57BL/6J (56 days, male) 14.8
2207 Antisense, RP_040507_02_D02, Mouse strain C57BL/6J (56 days, male) 11.4

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The Human Protein Atlas

The Human Protein Atlas project is funded
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