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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:187.0 nTPM
FANTOM5:198.1 Scaled Tags Per Million
Pig:113.9 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA019472Antibody CAB000075Antibody CAB034105
Glial cells Not detectedNot detectedNot detected
Neuronal cells Not detectedNot detectedNot detected







CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 187.0
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 187.0
Samples: 246

Max nTPM: 702.3
Min nTPM: 1.3
Std nTPM: 115.3
Median nTPM: 178.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 702.3
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 496.4
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 463.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 451.6
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 447.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 437.2
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 429.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 426.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 419.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 399.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 395.1
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 392.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 389.6
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 377.7
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 368.8
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 366.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 359.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 354.7
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 353.9
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 353.2
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 344.1
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 344.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 339.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 338.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 330.1
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 328.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 328.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 326.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 324.4
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 323.8
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 321.4
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 321.2
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 315.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 311.9
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 311.8
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 311.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 309.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 306.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 306.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 305.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 304.1
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 303.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 299.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 298.1
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 295.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 293.9
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 293.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 292.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 291.5
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 291.2
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 289.7
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 286.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 285.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 282.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 280.1
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 279.5
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 278.1
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 274.6
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 274.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 273.1
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 269.1
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 269.0
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 266.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 263.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 263.1
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 262.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 261.1
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 260.7
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 260.6
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 257.6
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 256.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 255.9
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 251.0
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 250.1
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 249.7
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 249.1
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 247.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 247.2
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 242.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 242.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 238.0
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 237.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 237.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 231.8
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 229.8
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 227.8
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 224.6
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 219.0
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 218.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 218.6
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 216.3
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 214.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 213.6
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 213.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 212.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 212.5
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 211.9
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 208.3
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 207.3
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 207.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 206.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 205.9
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 204.8
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 203.5
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 202.0
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 202.0
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 201.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 200.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 197.9
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 194.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 194.1
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 192.5
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 192.3
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 191.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 190.9
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 190.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 189.4
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 188.9
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 187.1
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 182.2
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 181.6
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 181.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 179.5
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 176.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 176.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 175.6
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 173.5
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 169.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 163.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 162.6
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 160.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 160.6
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 160.4
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 157.2
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 152.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 151.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 150.9
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 150.3
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 150.3
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 149.2
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 148.6
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 148.4
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 148.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 147.2
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 147.2
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 146.3
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 145.2
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 144.1
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 143.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 142.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 141.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 139.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 137.3
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 136.6
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 135.5
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 132.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 132.0
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 131.2
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 130.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 128.0
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 127.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 125.6
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 125.2
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 122.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 122.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 119.0
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 118.1
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 117.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 114.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 113.4
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 112.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 110.1
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 108.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 104.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 102.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 102.1
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 99.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 99.9
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 98.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 97.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 97.8
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 97.7
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 97.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 96.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 95.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 94.9
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 93.8
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 93.6
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 92.3
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 90.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 90.3
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 90.2
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 90.0
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 88.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 88.6
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 84.1
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 84.0
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 82.7
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 78.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 77.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 76.3
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 75.2
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 70.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 68.7
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 67.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 66.4
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 65.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 65.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 64.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 63.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 62.5
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 62.4
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 59.9
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 59.6
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 59.3
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 58.6
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 57.6
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 56.8
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 54.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 48.1
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 43.5
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 43.0
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 39.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 39.8
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 33.7
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 31.4
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 28.3
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 27.1
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 25.5
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 24.1
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 23.1
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 22.3
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 21.9
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 20.3
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 19.3
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 18.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 17.8
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 16.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 14.9
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 13.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 9.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 9.3
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 8.6
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 8.4
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 7.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 1.3
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 198.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 198.1
FF:10164-103B2 76 years, female 198.1

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 113.9
Pig sample Sample description nTPM
Caudate
nTPM: 114.0
Samples: 4

Max nTPM: 123.2
Min nTPM: 104.6
Sample A Female 116.3
Sample B Female 123.2
Sample C Male 111.7
Sample D Male 104.6

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