HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:14.4 nTPM
HPA:14.4 nTPM
GTEx:10.6 nTPM
FANTOM5:16.5 Scaled Tags Per Million
Pig:42.6 nTPM
Mouse:7.3 nTPM
Allen mouse:0.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA017199
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 14.4
Sample id Sample description nTPM
Hippocampus
nTPM: 5.1
1898 Male, age 80, left hemisphere 8.6
2621 Female, age 67, right hemisphere 6.7
1855 Male, age 76, left hemisphere 3.9
1911 Female, age 85, right hemisphere 3.9
2148 Female, age 91, left hemisphere 3.7
2529 Female, age 94, left hemisphere 3.6
Dentate gyrus
nTPM: 4.5
2530 Female, age 94, left hemisphere 5.8
1927 Female, age 91, both hemispheres 5.5
2010 Male, age 76, both hemispheres 5.3
2246 Female, age 85, both hemispheres 4.4
2528 Male, age 74, both hemispheres 3.3
2531 Female, age 67, both hemispheres 2.9
Entorhinal gyrus
nTPM: 12.9
2613 Female, age 94, left hemisphere 18.6
1938 Female, age 85, left hemisphere 15.1
2764 Male, age 80, right hemisphere 15.1
1787 Male, age 76, left hemisphere 13.1
2686 Male, age 75, right hemisphere 9.3
2117 Female, age 91, right hemisphere 6.2
Hippocampus, CA1
nTPM: 7.1
2749 Male, age 80, left hemisphere 18.2
2527 Male, age 74, both hemispheres 6.9
2082 Female, age 91, right hemisphere 4.4
1873 Female, age 85, both hemispheres 3.8
2045 Male, age 76, both hemispheres 2.1
Hippocampus, CA2
nTPM: 6.6
2437 Female, age 94, left hemisphere 9.3
1963 Male, age 80, left hemisphere 9.2
1892 Male, age 76, both hemispheres 8.6
2249 Male, age 74, both hemispheres 5.7
2113 Female, age 91, right hemisphere 4.6
1940 Female, age 85, left hemisphere 2.3
Hippocampus, CA3
nTPM: 6.8
2137 Male, age 80, left hemisphere 14.0
1867 Male, age 76, both hemispheres 6.9
2436 Male, age 74, both hemispheres 6.0
1891 Female, age 85, both hemispheres 5.2
2861 Female, age 67, both hemispheres 4.7
2620 Female, age 94, left hemisphere 4.4
Parahippocampal cortex
nTPM: 10.9
1990 Female, age 91, right hemisphere 14.5
1850 Male, age 80, both hemispheres 14.4
2693 Female, age 94, both hemispheres 12.7
2622 Female, age 67, right hemisphere 12.1
2532 Female, age 72, left hemisphere 11.7
1933 Female, age 85, both hemispheres 10.6
2245 Female, age 91, both hemispheres 9.9
2692 Male, age 74, both hemispheres 8.3
2250 Female, age 67, right hemisphere 8.2
2018 Male, age 76, both hemispheres 6.4
Perirhinal gyrus
nTPM: 14.4
1847 Female, age 91, left hemisphere 18.2
1794 Male, age 80, right hemisphere 15.1
1841 Female, age 85, right hemisphere 14.3
2848 Male, age 76, right hemisphere 13.0
2521 Female, age 94, right hemisphere 11.2
Subiculum
nTPM: 7.3
1977 Female, age 85, both hemispheres 11.2
1901 Male, age 80, both hemispheres 9.1
2438 Female, age 94, left hemisphere 8.2
2619 Male, age 74, both hemispheres 7.4
2042 Male, age 76, both hemispheres 4.5
2729 Female, age 91, right hemisphere 3.4

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 10.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 10.6
Samples: 197

Max nTPM: 26.7
Min nTPM: 3.3
Std nTPM: 5.4
Median nTPM: 9.0
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 26.7
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 26.3
GTEX-WWYW-0011-R1A-SM-3TW8G 50-59 years, female 25.6
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 24.4
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 23.1
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 22.8
GTEX-14ABY-0011-R1a-SM-6EU2W 50-59 years, male 20.7
GTEX-16YQH-0011-R1a-SM-7LT8R 30-39 years, male 20.7
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 20.7
GTEX-1F48J-0011-R1a-SM-9QEIC 50-59 years, female 20.6
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 20.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 16.5
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 16.5
FF:10153-102I9 76 years, female 17.4
FF:10169-103B7 60 years, female 15.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 42.6
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 42.6
Samples: 4

Max nTPM: 57.9
Min nTPM: 29.1
Sample A Female 57.9
Sample B Female 36.7
Sample C Male 46.7
Sample D Male 29.1
Entorhinal cortex
nTPM: 32.5
Samples: 4

Max nTPM: 36.0
Min nTPM: 26.4
Sample A Female 32.3
Sample B Female 36.0
Sample C Male 35.4
Sample D Male 26.4
Subiculum
nTPM: 37.4
Samples: 4

Max nTPM: 46.0
Min nTPM: 33.2
Sample A Female 46.0
Sample B Female 36.6
Sample C Male 33.7
Sample D Male 33.2
Ventral hippocampus
nTPM: 38.8
Samples: 4

Max nTPM: 43.6
Min nTPM: 32.2
Sample A Female 43.6
Sample B Female 32.2
Sample C Male 41.5
Sample D Male 37.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 7.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 7.4
Samples: 4

Max nTPM: 8.6
Min nTPM: 6.5
Sample A Male 8.6
Sample B Male 7.4
Sample C Female 6.5
Sample D Female 6.9
Hippocampal formation
nTPM: 6.1
Samples: 4

Max nTPM: 6.8
Min nTPM: 5.4
Sample A Male 6.2
Sample B Male 5.4
Sample C Female 6.8
Sample D Female 6.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.3
68498558 Antisense, RP_050113_02_A12, Mouse strain C57BL/6J (56 days, male) 0.3

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