HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Medium
Neuronal cells: Medium
Mouse brain, Intensity
Hippocampal formationi 		22.322
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:12.1 nTPM
HPA:12.1 nTPM
GTEx:28.4 nTPM
FANTOM5:11.1 Scaled Tags Per Million
Pig:59.5 nTPM
Mouse:124.2 nTPM
Allen mouse:2.5 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA006403
Glial cells Medium
Neuronal cells Medium



HIPPOCAMPAL FORMATION - Mouse brain profilei , antibody HPA006403
Hippocampal formation mean intensity 22.322
intensityi
FRONT BACK
Polymorph layer of the dentate gyrus 11.283
Molecular layer of the dentate gyrus 0.826
Granular dentate gyrus 10.313
CA1 - oriens layer 7.507
CA1 - pyramidal layer 16.745
CA1 - radiatum layer 3.854
CA2 - oriens layer 10.402
CA2 - pyramidal layer 22.322
CA2 - radiatum layer 10.348
CA3 - oriens layer 7.847
CA3 - pyramidal layer 21.101
CA3 - radiatum layer 9.870
Stratum lucidum 22.184
Lacunosum moleculare 1.391
Subiculum 16.485

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 12.1
Sample id Sample description nTPM
Hippocampus
nTPM: 9.4
1898 Male, age 80, left hemisphere 11.9
2621 Female, age 67, right hemisphere 9.9
1855 Male, age 76, left hemisphere 9.0
2148 Female, age 91, left hemisphere 9.0
1911 Female, age 85, right hemisphere 8.5
2529 Female, age 94, left hemisphere 8.3
Dentate gyrus
nTPM: 9.5
2530 Female, age 94, left hemisphere 12.8
1927 Female, age 91, both hemispheres 11.1
2531 Female, age 67, both hemispheres 9.7
2010 Male, age 76, both hemispheres 8.7
2246 Female, age 85, both hemispheres 7.7
2528 Male, age 74, both hemispheres 7.3
Entorhinal gyrus
nTPM: 10.8
2764 Male, age 80, right hemisphere 13.6
2613 Female, age 94, left hemisphere 12.1
2686 Male, age 75, right hemisphere 11.3
1938 Female, age 85, left hemisphere 10.5
2117 Female, age 91, right hemisphere 9.2
1787 Male, age 76, left hemisphere 8.4
Hippocampus, CA1
nTPM: 10.3
2749 Male, age 80, left hemisphere 15.9
2527 Male, age 74, both hemispheres 10.7
1873 Female, age 85, both hemispheres 10.0
2082 Female, age 91, right hemisphere 8.4
2045 Male, age 76, both hemispheres 6.5
Hippocampus, CA2
nTPM: 10.1
1963 Male, age 80, left hemisphere 12.5
1892 Male, age 76, both hemispheres 11.3
2437 Female, age 94, left hemisphere 10.9
2249 Male, age 74, both hemispheres 9.6
1940 Female, age 85, left hemisphere 8.6
2113 Female, age 91, right hemisphere 8.1
Hippocampus, CA3
nTPM: 10.1
2137 Male, age 80, left hemisphere 14.8
2861 Female, age 67, both hemispheres 12.2
2620 Female, age 94, left hemisphere 9.4
1867 Male, age 76, both hemispheres 9.1
2436 Male, age 74, both hemispheres 8.4
1891 Female, age 85, both hemispheres 7.0
Parahippocampal cortex
nTPM: 10.2
2245 Female, age 91, both hemispheres 12.1
2622 Female, age 67, right hemisphere 12.0
1850 Male, age 80, both hemispheres 11.3
1933 Female, age 85, both hemispheres 11.3
2693 Female, age 94, both hemispheres 11.3
2250 Female, age 67, right hemisphere 10.2
2532 Female, age 72, left hemisphere 9.0
1990 Female, age 91, right hemisphere 8.4
2692 Male, age 74, both hemispheres 8.1
2018 Male, age 76, both hemispheres 8.0
Perirhinal gyrus
nTPM: 12.1
1794 Male, age 80, right hemisphere 13.4
1847 Female, age 91, left hemisphere 13.2
2848 Male, age 76, right hemisphere 12.1
1841 Female, age 85, right hemisphere 11.9
2521 Female, age 94, right hemisphere 10.1
Subiculum
nTPM: 8.0
2619 Male, age 74, both hemispheres 9.1
1901 Male, age 80, both hemispheres 8.8
2729 Female, age 91, right hemisphere 8.6
1977 Female, age 85, both hemispheres 8.1
2042 Male, age 76, both hemispheres 7.7
2438 Female, age 94, left hemisphere 5.8

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 28.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 28.4
Samples: 197

Max nTPM: 79.0
Min nTPM: 5.2
Std nTPM: 13.5
Median nTPM: 26.7
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 79.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 67.8
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 64.6
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 60.2
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 59.2
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 58.4
GTEX-1IOXB-0011-R1a-SM-D4P27 50-59 years, male 56.3
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 55.8
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 54.2
GTEX-P44H-0011-R1A-SM-3NM8J 40-49 years, male 54.0
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 53.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 11.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 11.1
FF:10153-102I9 76 years, female 14.0
FF:10169-103B7 60 years, female 8.3

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 59.5
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 34.9
Samples: 4

Max nTPM: 44.8
Min nTPM: 19.2
Sample A Female 44.8
Sample B Female 36.4
Sample C Male 39.1
Sample D Male 19.2
Entorhinal cortex
nTPM: 59.6
Samples: 4

Max nTPM: 70.8
Min nTPM: 44.7
Sample A Female 52.7
Sample B Female 70.1
Sample C Male 70.8
Sample D Male 44.7
Subiculum
nTPM: 48.9
Samples: 4

Max nTPM: 67.3
Min nTPM: 40.7
Sample A Female 67.3
Sample B Female 45.4
Sample C Male 42.3
Sample D Male 40.7
Ventral hippocampus
nTPM: 40.1
Samples: 4

Max nTPM: 58.4
Min nTPM: 31.4
Sample A Female 38.2
Sample B Female 31.4
Sample C Male 58.4
Sample D Male 32.3

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 124.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 124.3
Samples: 4

Max nTPM: 130.0
Min nTPM: 115.5
Sample A Male 124.0
Sample B Male 130.0
Sample C Female 127.5
Sample D Female 115.5
Hippocampal formation
nTPM: 110.5
Samples: 4

Max nTPM: 121.2
Min nTPM: 101.1
Sample A Male 121.2
Sample B Male 101.1
Sample C Female 105.1
Sample D Female 114.6

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.5
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.5
75692770 Antisense, RP_051214_02_B11, Mouse strain C57BL/6J (56 days, male) 2.5
74047901 Antisense, RP_051214_02_B11, Mouse strain C57BL/6J (56 days, male) 1.9

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The Human Protein Atlas

The Human Protein Atlas project is funded
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