HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:61.1 nTPM
HPA:61.1 nTPM
GTEx:48.8 nTPM
FANTOM5:63.8 Scaled Tags Per Million
Pig:27.7 nTPM
Mouse:81.3 nTPM
Allen mouse:6.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody CAB037240
Glial cells Low
Neuronal cells High



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 61.1
Sample id Sample description nTPM
Hippocampus
nTPM: 60.5
2529 Female, age 94, left hemisphere 62.2
1898 Male, age 80, left hemisphere 62.1
1855 Male, age 76, left hemisphere 60.6
1911 Female, age 85, right hemisphere 59.7
2621 Female, age 67, right hemisphere 59.4
2148 Female, age 91, left hemisphere 59.0
Dentate gyrus
nTPM: 60.4
2010 Male, age 76, both hemispheres 63.8
2530 Female, age 94, left hemisphere 62.5
1927 Female, age 91, both hemispheres 60.7
2246 Female, age 85, both hemispheres 60.3
2528 Male, age 74, both hemispheres 59.7
2531 Female, age 67, both hemispheres 55.6
Entorhinal gyrus
nTPM: 59.2
2764 Male, age 80, right hemisphere 61.4
2117 Female, age 91, right hemisphere 61.2
1938 Female, age 85, left hemisphere 59.7
1787 Male, age 76, left hemisphere 58.4
2613 Female, age 94, left hemisphere 58.1
2686 Male, age 75, right hemisphere 56.2
Hippocampus, CA1
nTPM: 60.9
2749 Male, age 80, left hemisphere 67.3
1873 Female, age 85, both hemispheres 64.9
2527 Male, age 74, both hemispheres 58.4
2045 Male, age 76, both hemispheres 57.6
2082 Female, age 91, right hemisphere 56.4
Hippocampus, CA2
nTPM: 61.1
1892 Male, age 76, both hemispheres 65.7
1963 Male, age 80, left hemisphere 62.8
2249 Male, age 74, both hemispheres 61.7
2437 Female, age 94, left hemisphere 59.3
2113 Female, age 91, right hemisphere 59.1
1940 Female, age 85, left hemisphere 57.9
Hippocampus, CA3
nTPM: 60.5
2436 Male, age 74, both hemispheres 64.3
1891 Female, age 85, both hemispheres 63.5
2137 Male, age 80, left hemisphere 63.3
1867 Male, age 76, both hemispheres 61.8
2620 Female, age 94, left hemisphere 57.5
2861 Female, age 67, both hemispheres 52.4
Parahippocampal cortex
nTPM: 58.6
2692 Male, age 74, both hemispheres 60.3
1850 Male, age 80, both hemispheres 60.1
2532 Female, age 72, left hemisphere 59.8
1990 Female, age 91, right hemisphere 59.5
2250 Female, age 67, right hemisphere 59.5
1933 Female, age 85, both hemispheres 58.6
2018 Male, age 76, both hemispheres 57.4
2245 Female, age 91, both hemispheres 57.3
2693 Female, age 94, both hemispheres 57.3
2622 Female, age 67, right hemisphere 56.2
Perirhinal gyrus
nTPM: 58.9
1841 Female, age 85, right hemisphere 60.6
1847 Female, age 91, left hemisphere 59.8
1794 Male, age 80, right hemisphere 58.6
2521 Female, age 94, right hemisphere 58.0
2848 Male, age 76, right hemisphere 57.2
Subiculum
nTPM: 60.9
2042 Male, age 76, both hemispheres 63.6
1901 Male, age 80, both hemispheres 63.0
2619 Male, age 74, both hemispheres 61.7
1977 Female, age 85, both hemispheres 60.3
2729 Female, age 91, right hemisphere 58.6
2438 Female, age 94, left hemisphere 58.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 48.8
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 48.8
Samples: 197

Max nTPM: 116.4
Min nTPM: 34.8
Std nTPM: 8.8
Median nTPM: 47.9
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 116.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 68.0
GTEX-X4EP-0011-R1A-SM-3P624 60-69 years, female 66.3
GTEX-UTHO-0011-R1A-SM-3GIJO 60-69 years, male 66.0
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 65.7
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 65.1
GTEX-1AX9I-0011-R1b-SM-7RHG2 60-69 years, male 65.0
GTEX-13RTJ-0011-R1a-SM-5O9D9 60-69 years, male 64.8
GTEX-1H1ZS-0011-R1b-SM-A9G1E 70-79 years, male 63.9
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 63.5
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 63.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 63.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 63.8
FF:10153-102I9 76 years, female 66.0
FF:10169-103B7 60 years, female 61.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 27.7
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 27.7
Samples: 4

Max nTPM: 38.0
Min nTPM: 20.4
Sample A Female 38.0
Sample B Female 26.8
Sample C Male 25.7
Sample D Male 20.4
Entorhinal cortex
nTPM: 22.9
Samples: 4

Max nTPM: 25.9
Min nTPM: 18.8
Sample A Female 25.6
Sample B Female 25.9
Sample C Male 21.4
Sample D Male 18.8
Subiculum
nTPM: 23.9
Samples: 4

Max nTPM: 32.2
Min nTPM: 19.7
Sample A Female 32.2
Sample B Female 21.4
Sample C Male 22.3
Sample D Male 19.7
Ventral hippocampus
nTPM: 26.5
Samples: 4

Max nTPM: 31.4
Min nTPM: 18.9
Sample A Female 28.9
Sample B Female 18.9
Sample C Male 31.4
Sample D Male 26.8

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 81.3
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 74.5
Samples: 4

Max nTPM: 78.8
Min nTPM: 70.7
Sample A Male 70.7
Sample B Male 78.8
Sample C Female 76.0
Sample D Female 72.6
Hippocampal formation
nTPM: 81.3
Samples: 4

Max nTPM: 86.5
Min nTPM: 79.3
Sample A Male 86.5
Sample B Male 79.3
Sample C Female 79.6
Sample D Female 79.7

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 6.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 6.7
323586 Antisense, RP_040609_01_F11, Mouse strain C57BL/6J (56 days, male) 7.3
76098401 Antisense, RP_060626_01_H02, Mouse strain C57BL/6J (56 days, male) 6.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
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