COLON - Expression summary
Protein expression
Coloni
h
m
l
n
Endothelial cells: Not detected
Glandular cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:27.2 nTPM
HPA:23.2 nTPM
GTEx:27.2 nTPM
FANTOM5:47.7 Scaled Tags Per Million

COLON - Antibody stainingi
Antibody HPA017926Antibody HPA048867
Endothelial cells Not detectedMedium
Glandular cells HighMedium
Peripheral nerve/ganglion -Not detected





COLON - HPA RNA-seqi
Average nTPM 23.2
overview
Male, age 54 		Colon sample 67
nTPM: 16.7
Cell types%
Glandular cells:
65

Smooth muscle cells:
10

Other cell types:
25
overview
Female, age 57 		Colon sample 68
nTPM: 14.5
Cell types%
Glandular cells:
40

Smooth muscle cells:
5

Other cell types:
55
overview
Male, age 80 		Colon sample 69
nTPM: 17
Cell types%
Glandular cells:
55

Smooth muscle cells:
5

Other cell types:
40
overview
Male, age 68 		Colon sample 70
nTPM: 19.5
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 68 		Colon sample 76
nTPM: 17.7
Cell types%
Glandular cells:
25

Smooth muscle cells:
5

Other cell types:
70
overview
Female, age 61 		Colon sample 299
nTPM: 36.3
Cell types%
Glandular cells:
5

Smooth muscle cells:
65

Other cell types:
30
overview
Male, age 80 		Colon sample 300
nTPM: 29.1
Cell types%
Glandular cells:
15

Smooth muscle cells:
20

Other cell types:
65
overview
Female, age 78 		Colon sample 368
nTPM: 26
Cell types%
Glandular cells:
45

Smooth muscle cells:
5

Other cell types:
50
overview
Male, age 84 		Colon sample 381
nTPM: 22.6
Cell types%
Glandular cells:
50

Smooth muscle cells:
15

Other cell types:
35
overview
Male, age 80 		Colon sample 384
nTPM: 31.6
Cell types%
Glandular cells:
20

Smooth muscle cells:
35

Other cell types:
45
overview
Female, age 78 		Colon sample 389
nTPM: 24.6
Cell types%
Glandular cells:
35

Smooth muscle cells:
10

Other cell types:
55
overview
Female, age 69 		Colon sample 391
nTPM: 22.6
Cell types%
Glandular cells:
10

Smooth muscle cells:
45

Other cell types:
45
overview
Female, age 72 		Colon sample 403
nTPM: 23.8
Cell types%
Glandular cells:
20

Smooth muscle cells:
15

Other cell types:
65

COLON - GTEx RNA-seqi
Average nTPM 27.2
GTEx sample id Sample description nTPM
Colon - Sigmoid
Average nTPM: 27.2
Samples: 373

Max nTPM: 51.0
Min nTPM: 12.8
Std nTPM: 6.1
Median nTPM: 26.4
GTEX-15RJ7-1726-SM-6PAL3 40-49 years, male 51.0
GTEX-ZDTS-2726-SM-5L3E2 60-69 years, male 48.2
GTEX-ZE9C-2126-SM-4WKGY 60-69 years, male 47.5
GTEX-1PBJJ-2026-SM-DTX8U 30-39 years, male 46.3
GTEX-1RDX4-1926-SM-E6CJJ 50-59 years, female 45.8
GTEX-13CF3-1326-SM-5LZXZ 60-69 years, female 44.2
GTEX-WFG8-1726-SM-4LVM6 20-29 years, male 44.0
GTEX-1S5ZA-1426-SM-E6CJQ 20-29 years, male 43.5
GTEX-13FTW-2126-SM-5K7YG 40-49 years, male 43.2
GTEX-1GN73-2726-SM-9WYUB 60-69 years, male 42.7
GTEX-145LT-0826-SM-5S2QL 40-49 years, male 42.2
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Colon - Transverse
Average nTPM: 24.5
Samples: 406

Max nTPM: 64.5
Min nTPM: 15.3
Std nTPM: 5.3
Median nTPM: 23.8
GTEX-18QFQ-1526-SM-72D57 30-39 years, male 64.5
GTEX-WEY5-1426-SM-4LMJ3 40-49 years, female 54.0
GTEX-1HKZK-2126-SM-A9SL3 40-49 years, male 48.0
GTEX-13FH7-1526-SM-5J2N6 50-59 years, female 44.7
GTEX-1MUQO-2626-SM-EWRO3 60-69 years, male 44.4
GTEX-1CB4I-2226-SM-7P8SL 50-59 years, male 41.7
GTEX-13O61-1626-SM-5KM3T 60-69 years, male 40.5
GTEX-13CF3-1426-SM-5K7YY 60-69 years, female 40.2
GTEX-18D9B-2526-SM-718BN 60-69 years, male 39.3
GTEX-14H4A-1926-SM-5ZZWN 40-49 years, female 38.5
GTEX-14ICL-1226-SM-5S2RD 30-39 years, male 37.9
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COLON - FANTOM5 CAGEi
Max Scaled Tags Per Million 47.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Colon
Scaled Tags Per Million: 47.7
FF:10014-101C5 62,83,84 years, mixed 47.7

Contact

The Project

The Human Protein Atlas

The Human Protein Atlas project is funded
by the Knut & Alice Wallenberg Foundation.