HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:105.6 nTPM
HPA:105.6 nTPM
GTEx:62.6 nTPM
FANTOM5:102.1 Scaled Tags Per Million
Pig:104.4 nTPM
Mouse:112.1 nTPM
Allen mouse:9.3 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA042728
Glial cells Not detected
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 105.6
Sample id Sample description nTPM
Hippocampus
nTPM: 89.3
2529 Female, age 94, left hemisphere 104.0
1898 Male, age 80, left hemisphere 96.2
1855 Male, age 76, left hemisphere 94.3
2148 Female, age 91, left hemisphere 90.8
1911 Female, age 85, right hemisphere 80.9
2621 Female, age 67, right hemisphere 69.3
Dentate gyrus
nTPM: 83.9
2246 Female, age 85, both hemispheres 98.1
2528 Male, age 74, both hemispheres 85.3
2010 Male, age 76, both hemispheres 82.9
2531 Female, age 67, both hemispheres 80.9
1927 Female, age 91, both hemispheres 79.0
2530 Female, age 94, left hemisphere 76.9
Entorhinal gyrus
nTPM: 94.8
1938 Female, age 85, left hemisphere 107.6
1787 Male, age 76, left hemisphere 106.6
2764 Male, age 80, right hemisphere 100.5
2117 Female, age 91, right hemisphere 91.4
2686 Male, age 75, right hemisphere 82.7
2613 Female, age 94, left hemisphere 79.8
Hippocampus, CA1
nTPM: 91.3
2045 Male, age 76, both hemispheres 100.0
2527 Male, age 74, both hemispheres 95.0
1873 Female, age 85, both hemispheres 89.8
2749 Male, age 80, left hemisphere 86.8
2082 Female, age 91, right hemisphere 84.8
Hippocampus, CA2
nTPM: 85.1
1940 Female, age 85, left hemisphere 99.3
1892 Male, age 76, both hemispheres 88.9
2113 Female, age 91, right hemisphere 88.7
1963 Male, age 80, left hemisphere 79.5
2437 Female, age 94, left hemisphere 78.5
2249 Male, age 74, both hemispheres 75.9
Hippocampus, CA3
nTPM: 87.3
2620 Female, age 94, left hemisphere 92.9
2137 Male, age 80, left hemisphere 92.7
2861 Female, age 67, both hemispheres 91.4
1867 Male, age 76, both hemispheres 86.7
1891 Female, age 85, both hemispheres 84.6
2436 Male, age 74, both hemispheres 75.2
Parahippocampal cortex
nTPM: 93.9
1933 Female, age 85, both hemispheres 113.9
1850 Male, age 80, both hemispheres 104.0
2250 Female, age 67, right hemisphere 101.0
2692 Male, age 74, both hemispheres 94.7
2622 Female, age 67, right hemisphere 93.9
2018 Male, age 76, both hemispheres 91.0
2245 Female, age 91, both hemispheres 90.4
1990 Female, age 91, right hemisphere 90.1
2532 Female, age 72, left hemisphere 81.2
2693 Female, age 94, both hemispheres 78.9
Perirhinal gyrus
nTPM: 105.6
1847 Female, age 91, left hemisphere 109.4
1794 Male, age 80, right hemisphere 109.2
1841 Female, age 85, right hemisphere 107.6
2848 Male, age 76, right hemisphere 105.2
2521 Female, age 94, right hemisphere 96.7
Subiculum
nTPM: 87.0
2619 Male, age 74, both hemispheres 102.5
2729 Female, age 91, right hemisphere 95.5
1977 Female, age 85, both hemispheres 90.2
1901 Male, age 80, both hemispheres 83.5
2042 Male, age 76, both hemispheres 76.5
2438 Female, age 94, left hemisphere 73.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 62.6
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 62.6
Samples: 197

Max nTPM: 168.9
Min nTPM: 24.0
Std nTPM: 22.5
Median nTPM: 57.6
GTEX-X4XX-0011-R1B-SM-3P622 60-69 years, male 168.9
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 161.4
GTEX-P44G-0011-R1A-SM-2I3FE 30-39 years, male 153.8
GTEX-R55E-0011-R1A-SM-2TC6N 20-29 years, male 137.8
GTEX-PWO3-0011-R1A-SM-2I5EW 60-69 years, female 135.8
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 134.0
GTEX-14PJO-0011-R1b-SM-6AJAK 60-69 years, male 101.7
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 100.8
GTEX-QDT8-0011-R1A-SM-32PKS 30-39 years, female 100.8
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 99.9
GTEX-WL46-0011-R1A-SM-3LK6M 50-59 years, male 99.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 102.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 102.1
FF:10153-102I9 76 years, female 134.2
FF:10169-103B7 60 years, female 70.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 104.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 89.9
Samples: 4

Max nTPM: 115.3
Min nTPM: 69.8
Sample A Female 115.3
Sample B Female 81.6
Sample C Male 93.0
Sample D Male 69.8
Entorhinal cortex
nTPM: 104.4
Samples: 4

Max nTPM: 112.0
Min nTPM: 94.1
Sample A Female 107.7
Sample B Female 112.0
Sample C Male 103.6
Sample D Male 94.1
Subiculum
nTPM: 88.5
Samples: 4

Max nTPM: 116.0
Min nTPM: 75.6
Sample A Female 116.0
Sample B Female 80.0
Sample C Male 75.6
Sample D Male 82.3
Ventral hippocampus
nTPM: 81.0
Samples: 4

Max nTPM: 93.0
Min nTPM: 66.9
Sample A Female 76.9
Sample B Female 66.9
Sample C Male 87.0
Sample D Male 93.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 112.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 112.1
Samples: 4

Max nTPM: 117.6
Min nTPM: 107.9
Sample A Male 107.9
Sample B Male 111.2
Sample C Female 111.5
Sample D Female 117.6
Hippocampal formation
nTPM: 81.4
Samples: 4

Max nTPM: 95.6
Min nTPM: 66.3
Sample A Male 95.6
Sample B Male 83.7
Sample C Female 66.3
Sample D Female 80.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 9.3
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 9.3
71764156 Antisense, RP_050921_03_C11, Mouse strain C57BL/6J (56 days, male) 9.4
69201588 Antisense, RP_050317_03_B12, Mouse strain C57BL/6J (56 days, male) 9.4
72119592 Antisense, RP_051017_04_A07, Mouse strain C57BL/6J (56 days, male) 9.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
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