HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:48.8 nTPM
HPA:48.8 nTPM
GTEx:56.1 nTPM
FANTOM5:141.9 Scaled Tags Per Million
Pig:18.4 nTPM
Mouse:16.4 nTPM
Allen mouse:0.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA034648
Glial cells Low
Neuronal cells Medium



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 48.8
Sample id Sample description nTPM
Hippocampus
nTPM: 48.5
2529 Female, age 94, left hemisphere 51.1
2621 Female, age 67, right hemisphere 49.1
1898 Male, age 80, left hemisphere 48.3
1855 Male, age 76, left hemisphere 48.1
1911 Female, age 85, right hemisphere 48.1
2148 Female, age 91, left hemisphere 46.6
Dentate gyrus
nTPM: 48.4
2530 Female, age 94, left hemisphere 53.5
2010 Male, age 76, both hemispheres 49.8
2531 Female, age 67, both hemispheres 48.6
2246 Female, age 85, both hemispheres 48.2
1927 Female, age 91, both hemispheres 45.2
2528 Male, age 74, both hemispheres 45.1
Entorhinal gyrus
nTPM: 47.2
2686 Male, age 75, right hemisphere 51.0
2117 Female, age 91, right hemisphere 48.5
1938 Female, age 85, left hemisphere 47.0
1787 Male, age 76, left hemisphere 46.2
2613 Female, age 94, left hemisphere 45.5
2764 Male, age 80, right hemisphere 45.1
Hippocampus, CA1
nTPM: 47.5
2749 Male, age 80, left hemisphere 49.0
1873 Female, age 85, both hemispheres 48.8
2527 Male, age 74, both hemispheres 48.4
2045 Male, age 76, both hemispheres 46.8
2082 Female, age 91, right hemisphere 44.8
Hippocampus, CA2
nTPM: 47.3
1892 Male, age 76, both hemispheres 48.9
2437 Female, age 94, left hemisphere 48.6
1940 Female, age 85, left hemisphere 47.5
2249 Male, age 74, both hemispheres 46.7
1963 Male, age 80, left hemisphere 46.4
2113 Female, age 91, right hemisphere 45.9
Hippocampus, CA3
nTPM: 46.9
1867 Male, age 76, both hemispheres 49.0
2137 Male, age 80, left hemisphere 49.0
1891 Female, age 85, both hemispheres 47.8
2861 Female, age 67, both hemispheres 46.3
2436 Male, age 74, both hemispheres 44.9
2620 Female, age 94, left hemisphere 44.2
Parahippocampal cortex
nTPM: 46.9
2245 Female, age 91, both hemispheres 49.7
2532 Female, age 72, left hemisphere 48.7
2692 Male, age 74, both hemispheres 48.2
1850 Male, age 80, both hemispheres 47.0
2622 Female, age 67, right hemisphere 47.0
2018 Male, age 76, both hemispheres 46.9
1933 Female, age 85, both hemispheres 46.2
2250 Female, age 67, right hemisphere 46.0
1990 Female, age 91, right hemisphere 45.3
2693 Female, age 94, both hemispheres 44.3
Perirhinal gyrus
nTPM: 45.5
2848 Male, age 76, right hemisphere 47.1
1841 Female, age 85, right hemisphere 46.4
1794 Male, age 80, right hemisphere 45.2
2521 Female, age 94, right hemisphere 44.5
1847 Female, age 91, left hemisphere 44.1
Subiculum
nTPM: 48.8
2438 Female, age 94, left hemisphere 53.2
2042 Male, age 76, both hemispheres 50.5
1901 Male, age 80, both hemispheres 50.3
1977 Female, age 85, both hemispheres 46.7
2619 Male, age 74, both hemispheres 46.5
2729 Female, age 91, right hemisphere 45.6

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 56.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 56.1
Samples: 197

Max nTPM: 156.4
Min nTPM: 13.9
Std nTPM: 23.2
Median nTPM: 51.2
GTEX-1A32A-0011-R1a-SM-7P8SQ 50-59 years, female 156.4
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 151.1
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 138.1
GTEX-1CAV2-0011-R1a-SM-ARZML 40-49 years, female 132.5
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 130.4
GTEX-16GPK-0011-R1b-SM-7EWDH 60-69 years, male 115.3
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 113.0
GTEX-1C6VQ-0011-R1a-SM-7P8Q2 50-59 years, male 106.8
GTEX-1J8Q2-0011-R1a-SM-D4P2D 60-69 years, male 105.0
GTEX-1GN2E-0011-R1b-SM-CE6RJ 60-69 years, male 101.4
GTEX-11ZTS-0011-R1a-SM-5BC71 60-69 years, female 99.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 141.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 141.9
FF:10169-103B7 60 years, female 149.6
FF:10153-102I9 76 years, female 134.2

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 18.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 18.4
Samples: 4

Max nTPM: 19.6
Min nTPM: 17.1
Sample A Female 19.6
Sample B Female 17.3
Sample C Male 19.6
Sample D Male 17.1
Entorhinal cortex
nTPM: 16.5
Samples: 4

Max nTPM: 17.3
Min nTPM: 15.4
Sample A Female 16.6
Sample B Female 16.7
Sample C Male 15.4
Sample D Male 17.3
Subiculum
nTPM: 16.8
Samples: 4

Max nTPM: 19.0
Min nTPM: 15.3
Sample A Female 19.0
Sample B Female 15.3
Sample C Male 15.5
Sample D Male 17.2
Ventral hippocampus
nTPM: 16.4
Samples: 4

Max nTPM: 18.7
Min nTPM: 13.8
Sample A Female 17.8
Sample B Female 15.1
Sample C Male 13.8
Sample D Male 18.7

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 16.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 15.7
Samples: 4

Max nTPM: 17.2
Min nTPM: 13.7
Sample A Male 16.2
Sample B Male 13.7
Sample C Female 15.6
Sample D Female 17.2
Hippocampal formation
nTPM: 16.4
Samples: 4

Max nTPM: 20.1
Min nTPM: 13.7
Sample A Male 13.7
Sample B Male 17.7
Sample C Female 20.1
Sample D Female 14.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.4
71764101 Antisense, RP_050921_03_B12, Mouse strain C57BL/6J (56 days, male) 0.4

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