HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:10.6 nTPM
HPA:10.6 nTPM
GTEx:13.5 nTPM
FANTOM5:28.8 Scaled Tags Per Million
Pig:11.8 nTPM
Mouse:14.1 nTPM
Allen mouse:4.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA040847Antibody HPA041327
Glial cells HighHigh
Neuronal cells HighHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 10.6
Sample id Sample description nTPM
Hippocampus
nTPM: 9.4
2621 Female, age 67, right hemisphere 12.0
2529 Female, age 94, left hemisphere 10.2
2148 Female, age 91, left hemisphere 9.3
1911 Female, age 85, right hemisphere 8.5
1855 Male, age 76, left hemisphere 8.2
1898 Male, age 80, left hemisphere 8.0
Dentate gyrus
nTPM: 9.1
2530 Female, age 94, left hemisphere 11.2
2531 Female, age 67, both hemispheres 10.5
2246 Female, age 85, both hemispheres 10.2
2010 Male, age 76, both hemispheres 8.2
2528 Male, age 74, both hemispheres 7.6
1927 Female, age 91, both hemispheres 6.9
Entorhinal gyrus
nTPM: 10.6
2613 Female, age 94, left hemisphere 12.3
2686 Male, age 75, right hemisphere 10.9
1938 Female, age 85, left hemisphere 10.7
2117 Female, age 91, right hemisphere 10.1
1787 Male, age 76, left hemisphere 9.8
2764 Male, age 80, right hemisphere 9.6
Hippocampus, CA1
nTPM: 8.8
2749 Male, age 80, left hemisphere 10.2
1873 Female, age 85, both hemispheres 9.5
2527 Male, age 74, both hemispheres 8.4
2045 Male, age 76, both hemispheres 8.1
2082 Female, age 91, right hemisphere 7.9
Hippocampus, CA2
nTPM: 7.8
1892 Male, age 76, both hemispheres 9.2
2113 Female, age 91, right hemisphere 8.1
1940 Female, age 85, left hemisphere 8.0
2437 Female, age 94, left hemisphere 8.0
1963 Male, age 80, left hemisphere 7.3
2249 Male, age 74, both hemispheres 6.1
Hippocampus, CA3
nTPM: 10.3
2861 Female, age 67, both hemispheres 13.2
2620 Female, age 94, left hemisphere 12.9
2137 Male, age 80, left hemisphere 11.2
1867 Male, age 76, both hemispheres 9.4
1891 Female, age 85, both hemispheres 8.5
2436 Male, age 74, both hemispheres 6.7
Parahippocampal cortex
nTPM: 9.2
2622 Female, age 67, right hemisphere 11.8
2532 Female, age 72, left hemisphere 10.7
2245 Female, age 91, both hemispheres 10.5
2692 Male, age 74, both hemispheres 10.2
1850 Male, age 80, both hemispheres 9.3
1990 Female, age 91, right hemisphere 8.6
1933 Female, age 85, both hemispheres 8.4
2018 Male, age 76, both hemispheres 7.7
2250 Female, age 67, right hemisphere 7.7
2693 Female, age 94, both hemispheres 7.4
Perirhinal gyrus
nTPM: 8.5
1794 Male, age 80, right hemisphere 9.1
1847 Female, age 91, left hemisphere 9.0
1841 Female, age 85, right hemisphere 8.7
2521 Female, age 94, right hemisphere 8.1
2848 Male, age 76, right hemisphere 7.8
Subiculum
nTPM: 10.1
2438 Female, age 94, left hemisphere 12.7
2042 Male, age 76, both hemispheres 11.2
1901 Male, age 80, both hemispheres 10.9
1977 Female, age 85, both hemispheres 9.9
2619 Male, age 74, both hemispheres 9.4
2729 Female, age 91, right hemisphere 6.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 13.5
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 13.5
Samples: 197

Max nTPM: 26.8
Min nTPM: 6.8
Std nTPM: 3.0
Median nTPM: 13.0
GTEX-13NZ8-0011-R1b-SM-5KM3V 60-69 years, female 26.8
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 25.4
GTEX-139T8-0011-R1a-SM-5HL75 60-69 years, male 23.6
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 23.5
GTEX-13NYS-0011-R1b-SM-5MR55 60-69 years, male 22.0
GTEX-NL3H-0011-R1a-SM-48TDJ 60-69 years, male 21.4
GTEX-1HSMO-0011-R1a-SM-CM2SV 60-69 years, male 21.3
GTEX-13QJC-0011-R1b-SM-5S2UU 60-69 years, female 20.3
GTEX-144GO-0011-R1a-SM-5PNWO 60-69 years, male 20.1
GTEX-1H4P4-0011-R1b-SM-CL54V 50-59 years, male 19.2
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 18.3
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 28.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 28.8
FF:10153-102I9 76 years, female 32.6
FF:10169-103B7 60 years, female 25.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 11.8
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 11.8
Samples: 4

Max nTPM: 14.2
Min nTPM: 9.6
Sample A Female 14.2
Sample B Female 11.0
Sample C Male 12.4
Sample D Male 9.6
Entorhinal cortex
nTPM: 10.6
Samples: 4

Max nTPM: 11.4
Min nTPM: 9.8
Sample A Female 11.1
Sample B Female 10.1
Sample C Male 11.4
Sample D Male 9.8
Subiculum
nTPM: 10.5
Samples: 4

Max nTPM: 14.1
Min nTPM: 9.1
Sample A Female 14.1
Sample B Female 9.1
Sample C Male 9.5
Sample D Male 9.1
Ventral hippocampus
nTPM: 11.6
Samples: 4

Max nTPM: 15.1
Min nTPM: 8.1
Sample A Female 10.6
Sample B Female 8.1
Sample C Male 15.1
Sample D Male 12.4

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 14.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 14.2
Samples: 4

Max nTPM: 14.9
Min nTPM: 12.8
Sample A Male 14.8
Sample B Male 14.9
Sample C Female 12.8
Sample D Female 14.1
Hippocampal formation
nTPM: 13.0
Samples: 4

Max nTPM: 14.3
Min nTPM: 11.9
Sample A Male 11.9
Sample B Male 14.3
Sample C Female 12.7
Sample D Female 13.2

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 4.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 4.4
67978512 Antisense, RP_040923_01_D06, Mouse strain C57BL/6J (56 days, male) 4.4

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The Human Protein Atlas

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