HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:33.3 nTPM
HPA:33.3 nTPM
GTEx:32.1 nTPM
FANTOM5:13.3 Scaled Tags Per Million
Pig:20.4 nTPM
Mouse:24.2 nTPM
Allen mouse:2.6 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA035159Antibody HPA035160
Glial cells MediumHigh
Neuronal cells LowHigh





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 33.3
Sample id Sample description nTPM
Hippocampus
nTPM: 32.0
2621 Female, age 67, right hemisphere 32.8
2529 Female, age 94, left hemisphere 32.7
1898 Male, age 80, left hemisphere 32.4
1911 Female, age 85, right hemisphere 32.0
2148 Female, age 91, left hemisphere 31.4
1855 Male, age 76, left hemisphere 31.0
Dentate gyrus
nTPM: 32.1
2531 Female, age 67, both hemispheres 33.4
2530 Female, age 94, left hemisphere 32.6
2246 Female, age 85, both hemispheres 31.9
2528 Male, age 74, both hemispheres 31.8
1927 Female, age 91, both hemispheres 31.6
2010 Male, age 76, both hemispheres 31.6
Entorhinal gyrus
nTPM: 33.3
1938 Female, age 85, left hemisphere 34.4
2764 Male, age 80, right hemisphere 33.9
2117 Female, age 91, right hemisphere 33.3
2613 Female, age 94, left hemisphere 33.1
1787 Male, age 76, left hemisphere 32.7
2686 Male, age 75, right hemisphere 32.3
Hippocampus, CA1
nTPM: 32.2
2749 Male, age 80, left hemisphere 36.1
2527 Male, age 74, both hemispheres 33.0
2082 Female, age 91, right hemisphere 31.2
2045 Male, age 76, both hemispheres 30.5
1873 Female, age 85, both hemispheres 30.4
Hippocampus, CA2
nTPM: 33.2
1963 Male, age 80, left hemisphere 35.4
2437 Female, age 94, left hemisphere 33.8
1892 Male, age 76, both hemispheres 33.5
1940 Female, age 85, left hemisphere 33.3
2249 Male, age 74, both hemispheres 31.9
2113 Female, age 91, right hemisphere 31.5
Hippocampus, CA3
nTPM: 33.2
2137 Male, age 80, left hemisphere 35.7
2620 Female, age 94, left hemisphere 34.2
1891 Female, age 85, both hemispheres 32.9
2861 Female, age 67, both hemispheres 32.3
1867 Male, age 76, both hemispheres 32.2
2436 Male, age 74, both hemispheres 31.8
Parahippocampal cortex
nTPM: 32.7
2692 Male, age 74, both hemispheres 34.9
2622 Female, age 67, right hemisphere 34.0
2245 Female, age 91, both hemispheres 33.2
1933 Female, age 85, both hemispheres 32.9
2018 Male, age 76, both hemispheres 32.4
2250 Female, age 67, right hemisphere 32.3
1850 Male, age 80, both hemispheres 32.1
2693 Female, age 94, both hemispheres 32.1
1990 Female, age 91, right hemisphere 31.8
2532 Female, age 72, left hemisphere 31.7
Perirhinal gyrus
nTPM: 32.2
1794 Male, age 80, right hemisphere 32.7
1841 Female, age 85, right hemisphere 32.5
1847 Female, age 91, left hemisphere 32.3
2848 Male, age 76, right hemisphere 32.2
2521 Female, age 94, right hemisphere 31.3
Subiculum
nTPM: 33.1
2619 Male, age 74, both hemispheres 34.2
1901 Male, age 80, both hemispheres 34.1
1977 Female, age 85, both hemispheres 33.1
2042 Male, age 76, both hemispheres 33.0
2438 Female, age 94, left hemisphere 32.8
2729 Female, age 91, right hemisphere 31.2

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 32.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 32.1
Samples: 197

Max nTPM: 62.7
Min nTPM: 16.9
Std nTPM: 6.4
Median nTPM: 31.2
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 62.7
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 52.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 52.5
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 48.2
GTEX-1HR98-0011-R1a-SM-ARZLQ 60-69 years, male 47.3
GTEX-ZE7O-0011-R1a-SM-57WDM 50-59 years, female 47.0
GTEX-1399T-0011-R1b-SM-5DUWN 60-69 years, male 45.1
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 44.9
GTEX-17HHY-0011-R1a-SM-7189V 50-59 years, male 44.2
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 44.0
GTEX-ZF28-0011-R1a-SM-4WWD1 60-69 years, male 43.4
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 13.3
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 13.3
FF:10169-103B7 60 years, female 15.6
FF:10153-102I9 76 years, female 10.9

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 20.4
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 20.4
Samples: 4

Max nTPM: 26.3
Min nTPM: 14.7
Sample A Female 26.3
Sample B Female 19.7
Sample C Male 20.8
Sample D Male 14.7
Entorhinal cortex
nTPM: 18.0
Samples: 4

Max nTPM: 20.3
Min nTPM: 15.8
Sample A Female 20.3
Sample B Female 18.4
Sample C Male 17.6
Sample D Male 15.8
Subiculum
nTPM: 17.0
Samples: 4

Max nTPM: 21.5
Min nTPM: 15.1
Sample A Female 21.5
Sample B Female 15.1
Sample C Male 15.8
Sample D Male 15.6
Ventral hippocampus
nTPM: 18.6
Samples: 4

Max nTPM: 24.6
Min nTPM: 12.8
Sample A Female 16.8
Sample B Female 12.8
Sample C Male 20.0
Sample D Male 24.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 24.2
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 20.1
Samples: 4

Max nTPM: 23.3
Min nTPM: 17.1
Sample A Male 18.4
Sample B Male 23.3
Sample C Female 21.7
Sample D Female 17.1
Hippocampal formation
nTPM: 24.3
Samples: 4

Max nTPM: 26.7
Min nTPM: 22.6
Sample A Male 23.7
Sample B Male 22.6
Sample C Female 26.7
Sample D Female 24.0

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 2.6
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 2.6
71836831 Antisense, RP_051017_02_B06, Mouse strain C57BL/6J (56 days, male) 4.6
686193 Antisense, RP_040916_01_A01, Mouse strain C57BL/6J (56 days, male) 0.5

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The Human Protein Atlas

The Human Protein Atlas project is funded
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