HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:31.8 nTPM
HPA:31.8 nTPM
GTEx:39.1 nTPM
FANTOM5:14.1 Scaled Tags Per Million
Pig:8.9 nTPM
Mouse:6.1 nTPM
Allen mouse:0.0 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA045792
Glial cells Not detected
Neuronal cells Low

HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 31.8
Sample id Sample description nTPM
Hippocampus
nTPM: 29.9
1855 Male, age 76, left hemisphere 32.4
1898 Male, age 80, left hemisphere 31.7
2621 Female, age 67, right hemisphere 29.9
1911 Female, age 85, right hemisphere 29.1
2148 Female, age 91, left hemisphere 28.7
2529 Female, age 94, left hemisphere 28.0
Dentate gyrus
nTPM: 30.2
2530 Female, age 94, left hemisphere 35.0
2010 Male, age 76, both hemispheres 32.0
1927 Female, age 91, both hemispheres 29.2
2531 Female, age 67, both hemispheres 28.6
2246 Female, age 85, both hemispheres 28.3
2528 Male, age 74, both hemispheres 28.1
Entorhinal gyrus
nTPM: 27.7
2764 Male, age 80, right hemisphere 28.7
2613 Female, age 94, left hemisphere 28.2
2686 Male, age 75, right hemisphere 28.2
2117 Female, age 91, right hemisphere 28.1
1938 Female, age 85, left hemisphere 26.5
1787 Male, age 76, left hemisphere 26.4
Hippocampus, CA1
nTPM: 31.8
2749 Male, age 80, left hemisphere 38.6
1873 Female, age 85, both hemispheres 32.4
2045 Male, age 76, both hemispheres 30.4
2527 Male, age 74, both hemispheres 29.1
2082 Female, age 91, right hemisphere 28.6
Hippocampus, CA2
nTPM: 30.2
1963 Male, age 80, left hemisphere 34.9
1892 Male, age 76, both hemispheres 30.7
2249 Male, age 74, both hemispheres 30.1
2437 Female, age 94, left hemisphere 29.8
2113 Female, age 91, right hemisphere 28.3
1940 Female, age 85, left hemisphere 27.2
Hippocampus, CA3
nTPM: 30.0
2620 Female, age 94, left hemisphere 31.2
2137 Male, age 80, left hemisphere 31.1
1867 Male, age 76, both hemispheres 30.0
2861 Female, age 67, both hemispheres 30.0
2436 Male, age 74, both hemispheres 29.9
1891 Female, age 85, both hemispheres 27.7
Parahippocampal cortex
nTPM: 27.4
2245 Female, age 91, both hemispheres 28.5
2018 Male, age 76, both hemispheres 28.1
1990 Female, age 91, right hemisphere 27.5
2692 Male, age 74, both hemispheres 27.5
1933 Female, age 85, both hemispheres 27.4
2250 Female, age 67, right hemisphere 27.3
2532 Female, age 72, left hemisphere 27.3
2622 Female, age 67, right hemisphere 27.0
1850 Male, age 80, both hemispheres 26.7
2693 Female, age 94, both hemispheres 26.6
Perirhinal gyrus
nTPM: 27.8
1794 Male, age 80, right hemisphere 28.2
2521 Female, age 94, right hemisphere 28.2
1847 Female, age 91, left hemisphere 27.9
2848 Male, age 76, right hemisphere 27.6
1841 Female, age 85, right hemisphere 26.9
Subiculum
nTPM: 28.6
2042 Male, age 76, both hemispheres 30.9
2438 Female, age 94, left hemisphere 29.6
1901 Male, age 80, both hemispheres 29.3
2729 Female, age 91, right hemisphere 28.0
1977 Female, age 85, both hemispheres 26.9
2619 Male, age 74, both hemispheres 26.7

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 39.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 39.1
Samples: 197

Max nTPM: 104.9
Min nTPM: 12.7
Std nTPM: 15.7
Median nTPM: 36.7
GTEX-16NPV-0011-R1b-SM-7MGVZ 50-59 years, female 104.9
GTEX-14PN4-0011-R1b-SM-69LP8 50-59 years, male 92.5
GTEX-183WM-0011-R1a-SM-718A8 70-79 years, female 81.1
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 78.8
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 77.1
GTEX-OHPN-0011-R1A-SM-2I5GB 60-69 years, female 76.0
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 74.3
GTEX-17HG3-0011-R1a-SM-7LG6H 30-39 years, female 69.3
GTEX-13X6I-0011-R1b-SM-5PNZC 60-69 years, male 68.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 67.0
GTEX-12WSM-0011-R1a-SM-5LZW6 60-69 years, male 64.0
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 14.1
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 14.1
FF:10169-103B7 60 years, female 15.6
FF:10153-102I9 76 years, female 12.6

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 8.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 9.0
Samples: 4

Max nTPM: 11.3
Min nTPM: 7.4
Sample A Female 9.0
Sample B Female 8.1
Sample C Male 11.3
Sample D Male 7.4
Entorhinal cortex
nTPM: 8.0
Samples: 4

Max nTPM: 11.6
Min nTPM: 5.0
Sample A Female 5.0
Sample B Female 9.6
Sample C Male 11.6
Sample D Male 5.8
Subiculum
nTPM: 6.2
Samples: 4

Max nTPM: 6.7
Min nTPM: 5.4
Sample A Female 6.2
Sample B Female 6.7
Sample C Male 6.4
Sample D Male 5.4
Ventral hippocampus
nTPM: 8.0
Samples: 4

Max nTPM: 12.7
Min nTPM: 5.9
Sample A Female 6.4
Sample B Female 5.9
Sample C Male 12.7
Sample D Male 7.1

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 6.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 6.1
Samples: 4

Max nTPM: 6.8
Min nTPM: 5.4
Sample A Male 6.8
Sample B Male 5.4
Sample C Female 6.7
Sample D Female 5.4
Hippocampal formation
nTPM: 5.9
Samples: 4

Max nTPM: 6.0
Min nTPM: 5.6
Sample A Male 5.6
Sample B Male 5.9
Sample C Female 6.0
Sample D Female 5.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 0.0
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 0.0
74427086 Antisense, RP_051206_03_A09, Mouse strain C57BL/6J (56 days, male) 0.0

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