HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:12.4 nTPM
HPA:12.4 nTPM
GTEx:28.4 nTPM
FANTOM5:17.7 Scaled Tags Per Million
Pig:1.2 nTPM
Mouse:0.4 nTPM
Allen mouse:11.7 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA041070
Glial cells Not detected
Neuronal cells Low



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 12.4
Sample id Sample description nTPM
Hippocampus
nTPM: 3.6
2621 Female, age 67, right hemisphere 6.1
1898 Male, age 80, left hemisphere 4.7
2148 Female, age 91, left hemisphere 4.2
2529 Female, age 94, left hemisphere 3.5
1911 Female, age 85, right hemisphere 2.2
1855 Male, age 76, left hemisphere 0.8
Dentate gyrus
nTPM: 3.8
2531 Female, age 67, both hemispheres 7.4
1927 Female, age 91, both hemispheres 6.6
2528 Male, age 74, both hemispheres 3.8
2530 Female, age 94, left hemisphere 3.4
2246 Female, age 85, both hemispheres 1.5
2010 Male, age 76, both hemispheres 0.1
Entorhinal gyrus
nTPM: 10.5
2613 Female, age 94, left hemisphere 18.2
2686 Male, age 75, right hemisphere 12.2
2764 Male, age 80, right hemisphere 11.5
1787 Male, age 76, left hemisphere 9.5
1938 Female, age 85, left hemisphere 8.5
2117 Female, age 91, right hemisphere 3.3
Hippocampus, CA1
nTPM: 4.6
2749 Male, age 80, left hemisphere 7.7
2527 Male, age 74, both hemispheres 5.7
1873 Female, age 85, both hemispheres 3.6
2082 Female, age 91, right hemisphere 3.1
2045 Male, age 76, both hemispheres 2.7
Hippocampus, CA2
nTPM: 5.6
2437 Female, age 94, left hemisphere 15.9
1892 Male, age 76, both hemispheres 5.9
1963 Male, age 80, left hemisphere 5.7
2113 Female, age 91, right hemisphere 3.1
2249 Male, age 74, both hemispheres 2.8
1940 Female, age 85, left hemisphere 0.3
Hippocampus, CA3
nTPM: 5.4
2861 Female, age 67, both hemispheres 9.6
2137 Male, age 80, left hemisphere 7.9
1867 Male, age 76, both hemispheres 4.8
2436 Male, age 74, both hemispheres 4.4
2620 Female, age 94, left hemisphere 4.1
1891 Female, age 85, both hemispheres 1.7
Parahippocampal cortex
nTPM: 11.6
2622 Female, age 67, right hemisphere 22.2
2693 Female, age 94, both hemispheres 17.2
2245 Female, age 91, both hemispheres 14.6
2250 Female, age 67, right hemisphere 13.7
1990 Female, age 91, right hemisphere 11.3
1933 Female, age 85, both hemispheres 10.3
2532 Female, age 72, left hemisphere 8.1
1850 Male, age 80, both hemispheres 6.5
2018 Male, age 76, both hemispheres 6.4
2692 Male, age 74, both hemispheres 6.1
Perirhinal gyrus
nTPM: 12.4
2521 Female, age 94, right hemisphere 14.8
1847 Female, age 91, left hemisphere 12.9
1794 Male, age 80, right hemisphere 11.9
1841 Female, age 85, right hemisphere 11.9
2848 Male, age 76, right hemisphere 10.4
Subiculum
nTPM: 4.2
2619 Male, age 74, both hemispheres 11.3
1977 Female, age 85, both hemispheres 4.4
2438 Female, age 94, left hemisphere 3.3
2729 Female, age 91, right hemisphere 3.2
1901 Male, age 80, both hemispheres 3.0
2042 Male, age 76, both hemispheres 0.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 28.4
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 28.4
Samples: 197

Max nTPM: 87.0
Min nTPM: 1.4
Std nTPM: 18.4
Median nTPM: 25.4
GTEX-1LG7Y-0011-R1a-SM-EYYWV 50-59 years, male 87.0
GTEX-1HT8W-0011-R1b-SM-CJI3V 30-39 years, male 86.3
GTEX-145MH-0011-R1b-SM-5PNWY 50-59 years, male 83.8
GTEX-RNOR-0011-R1A-SM-CNNP5 50-59 years, female 83.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 70.1
GTEX-13NYB-0011-R1b-SM-5KM4F 40-49 years, male 69.9
GTEX-11DXW-0011-R1a-SM-DNZZD 40-49 years, male 68.2
GTEX-14LLW-0011-R1a-SM-5ZZVD 70-79 years, female 67.0
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 65.8
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 64.6
GTEX-1EWIQ-0011-R1a-SM-9OSX7 70-79 years, female 64.1
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 17.7
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 17.7
FF:10153-102I9 76 years, female 18.8
FF:10169-103B7 60 years, female 16.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 1.2
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 0.9
Samples: 4

Max nTPM: 1.0
Min nTPM: 0.9
Sample A Female 0.9
Sample B Female 1.0
Sample C Male 0.9
Sample D Male 0.9
Entorhinal cortex
nTPM: 1.0
Samples: 4

Max nTPM: 1.1
Min nTPM: 0.9
Sample A Female 1.1
Sample B Female 0.9
Sample C Male 1.0
Sample D Male 1.1
Subiculum
nTPM: 1.2
Samples: 4

Max nTPM: 1.5
Min nTPM: 0.9
Sample A Female 1.5
Sample B Female 1.3
Sample C Male 1.2
Sample D Male 0.9
Ventral hippocampus
nTPM: 1.0
Samples: 4

Max nTPM: 1.1
Min nTPM: 0.9
Sample A Female 1.1
Sample B Female 1.0
Sample C Male 0.9
Sample D Male 0.9

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 0.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 0.4
Samples: 4

Max nTPM: 0.6
Min nTPM: 0.0
Sample A Male 0.6
Sample B Male 0.4
Sample C Female 0.6
Sample D Female 0.0
Hippocampal formation
nTPM: 0.2
Samples: 4

Max nTPM: 0.5
Min nTPM: 0.1
Sample A Male 0.2
Sample B Male 0.1
Sample C Female 0.1
Sample D Female 0.5

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 11.7
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 11.7
72182947 Antisense, RP_051005_02_D12, Mouse strain C57BL/6J (56 days, male) 11.7

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