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A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.
Protein expressioni
On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.
Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.
If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.
A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.
The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.
Scroll down to view mRNA expression data in more detail.
HIPPOCAMPAL FORMATION - Annotated protein expression
Pending normal tissue analysis
HIPPOCAMPUS - Antibody stainingi
Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.
Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.
RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.
Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Max nTPM: 164.2
Min nTPM: 0.7
Std nTPM: 24.3
Median nTPM: 21.0
GTEX-18A6Q-0011-R1b-SM-731DI
60-69 years, male
164.2
GTEX-13OW5-0011-R1b-SM-5L3GE
60-69 years, male
137.3
GTEX-13OVL-0011-R1a-SM-5L3H5
50-59 years, male
109.3
GTEX-17EVP-0011-R1a-SM-7DHLA
40-49 years, male
101.6
GTEX-1LB8K-0011-R1b-SM-EZ6MV
50-59 years, male
93.9
GTEX-16GPK-0011-R1b-SM-7EWDH
60-69 years, male
86.0
GTEX-1H4P4-0011-R1b-SM-CL54V
50-59 years, male
85.5
GTEX-UTHO-0011-R1A-SM-3GIJO
60-69 years, male
82.1
GTEX-13QIC-0011-R1a-SM-5O9CJ
60-69 years, female
69.8
GTEX-1GN1U-0011-R1a-SM-CJI25
50-59 years, female
66.2
GTEX-13NZA-0011-R1b-SM-5LUAF
60-69 years, male
65.5
GTEX-183WM-0011-R1a-SM-718A8
70-79 years, female
64.7
GTEX-1GN2E-0011-R1b-SM-CE6RJ
60-69 years, male
62.6
GTEX-17HHY-0011-R1a-SM-7189V
50-59 years, male
61.3
GTEX-13RTL-0011-R1a-SM-5PNZ8
40-49 years, male
61.0
GTEX-11GSO-0011-R1b-SM-57WD3
60-69 years, male
60.4
GTEX-WZTO-0011-R1B-SM-3NMAR
40-49 years, male
60.0
GTEX-1E2YA-0011-R1b-SM-CJI29
50-59 years, male
57.8
GTEX-1C6VQ-0011-R1a-SM-7P8Q2
50-59 years, male
54.9
GTEX-1H3O1-0011-R1b-SM-CL554
60-69 years, male
54.7
GTEX-1A32A-0011-R1a-SM-7P8SQ
50-59 years, female
54.3
GTEX-1HBPI-0011-R1b-SM-A9SKF
50-59 years, male
54.3
GTEX-1E1VI-0011-R1a-SM-ARZMM
50-59 years, male
53.7
GTEX-15UF6-0011-R1a-SM-9QEGH
70-79 years, female
53.6
GTEX-14LZ3-0011-R1a-SM-69LP5
60-69 years, female
51.8
GTEX-13QJC-0011-R1b-SM-5S2UU
60-69 years, female
51.7
GTEX-13RTJ-0011-R1a-SM-5O9D9
60-69 years, male
51.7
GTEX-1BAJH-0011-R1a-SM-7P8SV
70-79 years, male
51.5
GTEX-13S7M-0011-R1b-SM-5PNZE
60-69 years, female
51.0
GTEX-X4XX-0011-R1B-SM-3P622
60-69 years, male
50.5
GTEX-17EVQ-0011-R1a-SM-7189S
70-79 years, male
50.3
GTEX-11UD1-0011-R1b-SM-5BC7D
40-49 years, female
49.7
GTEX-1B8SF-0011-R1b-SM-7P8Q8
60-69 years, male
49.3
GTEX-16XZZ-0011-R1a-SM-7LTAH
60-69 years, male
46.7
GTEX-NPJ8-0011-R1a-SM-33HCB
40-49 years, male
46.6
GTEX-N7MT-0011-R1a-SM-CNPO1
60-69 years, female
45.4
GTEX-13G51-0011-R1a-SM-5LZYR
60-69 years, male
43.9
GTEX-1H1DG-0011-R1b-SM-CKZP1
70-79 years, male
42.3
GTEX-11ZTS-0011-R1a-SM-5BC71
60-69 years, female
41.7
GTEX-13N1W-0011-R1b-SM-5MR4T
70-79 years, male
40.8
GTEX-13112-0011-R1b-SM-5HL7K
50-59 years, male
40.7
GTEX-1B933-0011-R1b-SM-9QEGW
50-59 years, female
40.3
GTEX-1I1GQ-0011-R1a-SM-CY8GG
50-59 years, male
40.1
GTEX-1H23P-0011-R1a-SM-ACKVC
60-69 years, male
39.6
GTEX-1AX9I-0011-R1b-SM-7RHG2
60-69 years, male
39.3
GTEX-145LS-0011-R1b-SM-5PNUP
60-69 years, female
39.0
GTEX-1F6IF-0011-R1b-SM-9WG78
60-69 years, male
39.0
GTEX-17MF6-0011-R1a-SM-72D6O
40-49 years, male
38.6
GTEX-15ER7-0011-R1b-SM-7KUE1
20-29 years, female
37.3
GTEX-1HR98-0011-R1a-SM-ARZLQ
60-69 years, male
37.3
GTEX-16NPV-0011-R1b-SM-7MGVZ
50-59 years, female
37.2
GTEX-Q2AG-0011-R1A-SM-2HMJI
40-49 years, female
36.9
GTEX-QMR6-0011-R1A-SM-32PKW
50-59 years, male
36.8
GTEX-1EKGG-0011-R1b-SM-9QEI1
60-69 years, male
36.0
GTEX-1H3NZ-0011-R1a-SM-CKZP5
60-69 years, male
35.4
GTEX-13N2G-0011-R1b-SM-5MR3G
60-69 years, male
35.1
GTEX-ZAB4-0011-R1a-SM-4RGNO
40-49 years, male
34.5
GTEX-12WSM-0011-R1a-SM-5LZW6
60-69 years, male
34.1
GTEX-17HII-0011-R1b-SM-7MGVW
50-59 years, male
34.1
GTEX-13CF2-0011-R1a-SM-5LZY1
60-69 years, male
33.8
GTEX-1F6I4-0011-R1a-SM-9OSWU
60-69 years, male
33.2
GTEX-13JVG-0011-R1a-SM-5KM32
60-69 years, male
32.6
GTEX-13OW6-0011-R1a-SM-5L3HQ
50-59 years, male
32.5
GTEX-13JUV-0011-R1a-SM-5LZY4
40-49 years, female
31.9
GTEX-1IOXB-0011-R1a-SM-D4P27
50-59 years, male
31.7
GTEX-1A8G6-0011-R1a-SM-7P8PC
60-69 years, male
31.5
GTEX-12WSH-0011-R1a-SM-5GU5V
50-59 years, male
30.8
GTEX-13X6I-0011-R1b-SM-5PNZC
60-69 years, male
30.4
GTEX-1C6VR-0011-R1a-SM-7MXUE
60-69 years, male
30.4
GTEX-1GN73-0011-R1a-SM-CKZNT
60-69 years, male
29.2
GTEX-X585-0011-R1B-SM-46MVE
50-59 years, male
29.1
GTEX-14E7W-0011-R1b-SM-5YYAT
70-79 years, male
28.9
GTEX-1H1CY-0011-R1a-SM-CKZOZ
60-69 years, female
28.5
GTEX-1HSKV-0011-R1b-SM-CMKH7
60-69 years, male
28.5
GTEX-13FXS-0011-R1a-SM-5K7U6
50-59 years, male
28.1
GTEX-13OW7-0011-R1b-SM-5L3HF
50-59 years, male
28.1
GTEX-1EH9U-0011-R1b-SM-CJI2B
60-69 years, male
27.9
GTEX-N7MS-0011-R1a-SM-2HMJG
60-69 years, male
27.7
GTEX-XMD1-0011-R1A-SM-4AT4C
60-69 years, male
27.5
GTEX-1GZ2Q-0011-R1a-SM-CJI2Y
40-49 years, male
27.2
GTEX-1C64N-0011-R1b-SM-7P8Q7
50-59 years, male
26.9
GTEX-1H3VE-0011-R1a-SM-A9G1K
40-49 years, male
26.5
GTEX-1IDJH-0011-R1b-SM-ARU6U
70-79 years, male
26.3
GTEX-T6MN-0011-R1A-SM-32QOY
50-59 years, male
26.1
GTEX-1CB4G-0011-R1b-SM-9QEHT
60-69 years, male
24.8
GTEX-13NZ8-0011-R1b-SM-5KM3V
60-69 years, female
24.7
GTEX-13NYS-0011-R1b-SM-5MR55
60-69 years, male
24.6
GTEX-1GZHY-0011-R1a-SM-CE6RR
50-59 years, female
24.3
GTEX-1I1GS-0011-R1a-SM-CJI43
60-69 years, male
24.0
GTEX-12WSD-0011-R1b-SM-5LZVY
60-69 years, female
23.6
GTEX-14PJM-0011-R1a-SM-CNPO3
50-59 years, female
23.4
GTEX-139TT-0011-R1a-SM-5LZVD
60-69 years, male
23.0
GTEX-1212Z-0011-R1b-SM-5BC72
60-69 years, male
22.7
GTEX-1HGF4-0011-R1a-SM-CJI3S
60-69 years, male
22.7
GTEX-PVOW-0011-R1A-SM-32PL6
40-49 years, male
22.4
GTEX-ZUA1-0011-R1a-SM-4YCE2
40-49 years, male
21.4
GTEX-12WSF-0011-R1a-SM-5DUVI
70-79 years, male
21.2
GTEX-145LU-0011-R1a-SM-5Q5CE
50-59 years, male
21.2
GTEX-1HSMO-0011-R1a-SM-CM2SV
60-69 years, male
21.0
GTEX-14ASI-0011-R1b-SM-5S2TY
60-69 years, male
20.9
GTEX-11WQC-0011-R1b-SM-DO932
60-69 years, male
20.7
GTEX-1GF9W-0011-R1a-SM-9QEIQ
60-69 years, male
20.7
GTEX-15CHQ-0011-R1a-SM-COH27
60-69 years, male
20.6
GTEX-17HG3-0011-R1a-SM-7LG6H
30-39 years, female
20.4
GTEX-1I1GV-0011-R1a-SM-CL559
60-69 years, male
20.3
GTEX-14C5O-0011-R1b-SM-6AJBW
60-69 years, male
19.4
GTEX-13OW8-0011-R1a-SM-5L3HI
60-69 years, male
19.2
GTEX-P44H-0011-R1A-SM-3NM8J
40-49 years, male
19.1
GTEX-17JCI-0011-R1b-SM-718A3
60-69 years, female
19.0
GTEX-1GTWX-0011-R1a-SM-CE6RL
60-69 years, male
18.7
GTEX-QVJO-0011-R1A-SM-2S1QI
60-69 years, female
18.5
GTEX-15DCD-0011-R1b-SM-6LPIJ
70-79 years, female
17.9
GTEX-14PQA-0011-R1b-SM-6EU1G
50-59 years, female
17.6
GTEX-1EX96-0011-R1a-SM-CE6R5
50-59 years, male
17.6
GTEX-1F48J-0011-R1a-SM-9QEIC
50-59 years, female
17.0
GTEX-14E6D-0011-R1b-SM-5YYAW
50-59 years, male
16.9
GTEX-1313W-0011-R1b-SM-5EQ4A
50-59 years, female
16.6
GTEX-11TUW-0011-R1a-SM-DO92S
60-69 years, male
16.0
GTEX-WHSE-0011-R1A-SM-3P5ZK
20-29 years, male
15.7
GTEX-1B996-0011-R1b-SM-7P8PO
60-69 years, male
15.4
GTEX-13O3O-0011-R1b-SM-5KM2K
60-69 years, female
15.3
GTEX-YJ89-0011-R1a-SM-4RGLS
60-69 years, male
15.3
GTEX-1GF9V-0011-R1a-SM-CKZNQ
60-69 years, male
14.8
GTEX-14JIY-0011-R1a-SM-68713
60-69 years, male
14.7
GTEX-12ZZX-0011-R1a-SM-5EQ6B
40-49 years, female
14.5
GTEX-QVUS-0011-R1A-SM-3GAD2
60-69 years, female
14.5
GTEX-1399T-0011-R1b-SM-5DUWN
60-69 years, male
14.4
GTEX-WL46-0011-R1A-SM-3LK6M
50-59 years, male
14.2
GTEX-13PDP-0011-R1a-SM-5PNX5
60-69 years, male
13.3
GTEX-144GO-0011-R1a-SM-5PNWO
60-69 years, male
13.0
GTEX-16YQH-0011-R1a-SM-7LT8R
30-39 years, male
13.0
GTEX-1EMGI-0011-R1b-SM-9OSWZ
60-69 years, male
13.0
GTEX-11DXW-0011-R1a-SM-DNZZD
40-49 years, male
12.9
GTEX-14PJO-0011-R1b-SM-6AJAK
60-69 years, male
12.4
GTEX-1A3MX-0011-R1b-SM-7P8PH
60-69 years, male
12.4
GTEX-132Q8-0011-R1a-SM-5EGLK
60-69 years, male
12.1
GTEX-1F75A-0011-R1b-SM-CE6RA
50-59 years, male
12.1
GTEX-13NYB-0011-R1b-SM-5KM4F
40-49 years, male
11.6
GTEX-16Z82-0011-R1b-SM-7EPHZ
60-69 years, male
11.4
GTEX-ZVZQ-0011-R1a-SM-57WBU
60-69 years, female
11.2
GTEX-RNOR-0011-R1A-SM-CNNP5
50-59 years, female
11.1
GTEX-1GMR8-0011-R1b-SM-CJI2O
50-59 years, female
10.7
GTEX-13FHP-0011-R1b-SM-5K7XL
50-59 years, male
10.6
GTEX-WWYW-0011-R1A-SM-3TW8G
50-59 years, female
10.5
GTEX-1CB4J-0011-R1a-SM-9WG64
60-69 years, male
10.2
GTEX-14PN4-0011-R1b-SM-69LP8
50-59 years, male
10.1
GTEX-ZF28-0011-R1a-SM-4WWD1
60-69 years, male
9.6
GTEX-11ZVC-0011-R1b-SM-5BC6M
50-59 years, female
9.4
GTEX-13FTY-0011-R1a-SM-5LZXE
40-49 years, female
9.0
GTEX-14ABY-0011-R1a-SM-6EU2W
50-59 years, male
8.8
GTEX-12WSE-0011-R1b-SM-5GU4V
20-29 years, male
8.7
GTEX-OHPN-0011-R1A-SM-2I5GB
60-69 years, female
8.3
GTEX-ZDXO-0011-R1a-SM-4WKF4
60-69 years, male
7.8
GTEX-13SLW-0011-R1a-SM-5S2W7
70-79 years, male
7.7
GTEX-T5JC-0011-R1A-SM-32PM6
20-29 years, male
7.7
GTEX-13OVJ-0011-R1b-SM-5L3I6
50-59 years, female
7.4
GTEX-17F97-0011-R1b-SM-7IGM9
50-59 years, male
7.0
GTEX-11EI6-0011-R1a-SM-DO93L
60-69 years, male
6.9
GTEX-1B8L1-0011-R1a-SM-7P8SS
60-69 years, male
6.8
GTEX-Y8DK-0011-R1A-SM-4RGLO
60-69 years, male
6.7
GTEX-1IKK5-0011-R1b-SM-CE6SQ
60-69 years, male
6.7
GTEX-14LLW-0011-R1a-SM-5ZZVD
70-79 years, female
6.5
GTEX-11ONC-0011-R1a-SM-57WD4
60-69 years, male
6.3
GTEX-YFC4-0011-R1a-SM-4V6EH
40-49 years, female
6.1
GTEX-TSE9-0011-R1A-SM-3DB7E
60-69 years, female
6.0
GTEX-WVLH-0011-R1A-SM-4MVOK
50-59 years, male
6.0
GTEX-1I1HK-0011-R1b-SM-CM2T7
60-69 years, male
6.0
GTEX-ZE7O-0011-R1a-SM-57WDM
50-59 years, female
5.7
GTEX-13FLW-0011-R1b-SM-5LZX2
50-59 years, male
5.5
GTEX-131YS-0011-R1a-SM-5DUXC
60-69 years, female
5.3
GTEX-13FHO-0011-R1b-SM-5KLZG
60-69 years, male
5.3
GTEX-QDT8-0011-R1A-SM-32PKS
30-39 years, female
5.2
GTEX-R55E-0011-R1A-SM-2TC6N
20-29 years, male
4.5
GTEX-1H1ZS-0011-R1b-SM-A9G1E
70-79 years, male
4.5
GTEX-NPJ7-0011-R1a-SM-3GACT
60-69 years, female
4.4
GTEX-144GL-0011-R1a-SM-5PNZ5
50-59 years, male
4.2
GTEX-1CAV2-0011-R1a-SM-ARZML
40-49 years, female
4.2
GTEX-PWO3-0011-R1A-SM-2I5EW
60-69 years, female
4.0
GTEX-13O3Q-0011-R1b-SM-5KM3L
50-59 years, male
3.9
GTEX-NL3H-0011-R1a-SM-48TDJ
60-69 years, male
3.9
GTEX-1ICLZ-0011-R1b-SM-A9SM3
60-69 years, male
3.9
GTEX-1LG7Y-0011-R1a-SM-EYYWV
50-59 years, male
3.9
GTEX-139T8-0011-R1a-SM-5HL75
60-69 years, male
3.7
GTEX-S7SE-0011-R1A-SM-2XCDE
50-59 years, male
3.6
GTEX-11GSP-0011-R1a-SM-9QEJ3
60-69 years, female
3.6
GTEX-1F75W-0011-R1a-SM-ARU81
60-69 years, male
3.0
GTEX-1J8Q2-0011-R1a-SM-D4P2D
60-69 years, male
2.6
GTEX-1IY9M-0011-R1a-SM-EXURZ
60-69 years, male
2.5
GTEX-P44G-0011-R1A-SM-2I3FE
30-39 years, male
2.4
GTEX-1HT8W-0011-R1b-SM-CJI3V
30-39 years, male
2.0
GTEX-1J1OQ-0011-R1a-SM-A9G1Z
40-49 years, female
2.0
GTEX-131XH-0011-R1a-SM-5DUWA
50-59 years, male
1.7
GTEX-145MH-0011-R1b-SM-5PNWY
50-59 years, male
1.7
GTEX-14BIM-0011-R1a-SM-69LQI
60-69 years, female
1.5
GTEX-X4EP-0011-R1A-SM-3P624
60-69 years, female
1.2
GTEX-1EWIQ-0011-R1a-SM-9OSX7
70-79 years, female
1.0
GTEX-11GS4-0011-R1a-SM-DO129
60-69 years, male
0.7
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
In situ hybridization (ISH) data generated by the Allen brain atlas from mouse brain is reported as expression energy. For more details about a particular experiment, click on the corresponding Allen experiment ID.