HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:34.7 nTPM
HPA:34.7 nTPM
GTEx:62.3 nTPM
FANTOM5:23.9 Scaled Tags Per Million
Pig:17.9 nTPM
Mouse:55.6 nTPM
Allen mouse:15.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA046615
Glial cells Not detected
Neuronal cells Not detected



HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 34.7
Sample id Sample description nTPM
Hippocampus
nTPM: 32.7
2621 Female, age 67, right hemisphere 38.7
1898 Male, age 80, left hemisphere 37.0
2148 Female, age 91, left hemisphere 34.1
1911 Female, age 85, right hemisphere 29.5
2529 Female, age 94, left hemisphere 28.5
1855 Male, age 76, left hemisphere 28.4
Dentate gyrus
nTPM: 31.1
2010 Male, age 76, both hemispheres 38.1
2530 Female, age 94, left hemisphere 36.2
1927 Female, age 91, both hemispheres 33.9
2528 Male, age 74, both hemispheres 27.7
2531 Female, age 67, both hemispheres 27.2
2246 Female, age 85, both hemispheres 23.3
Entorhinal gyrus
nTPM: 26.2
2613 Female, age 94, left hemisphere 31.5
2764 Male, age 80, right hemisphere 26.6
2117 Female, age 91, right hemisphere 26.4
1787 Male, age 76, left hemisphere 24.7
1938 Female, age 85, left hemisphere 24.6
2686 Male, age 75, right hemisphere 23.1
Hippocampus, CA1
nTPM: 33.6
2749 Male, age 80, left hemisphere 56.7
2527 Male, age 74, both hemispheres 36.8
1873 Female, age 85, both hemispheres 34.0
2082 Female, age 91, right hemisphere 21.4
2045 Male, age 76, both hemispheres 19.1
Hippocampus, CA2
nTPM: 34.7
1963 Male, age 80, left hemisphere 73.0
1892 Male, age 76, both hemispheres 30.3
2249 Male, age 74, both hemispheres 29.1
2437 Female, age 94, left hemisphere 26.6
2113 Female, age 91, right hemisphere 26.5
1940 Female, age 85, left hemisphere 23.0
Hippocampus, CA3
nTPM: 31.1
2861 Female, age 67, both hemispheres 41.6
2137 Male, age 80, left hemisphere 39.3
2436 Male, age 74, both hemispheres 28.9
2620 Female, age 94, left hemisphere 28.6
1891 Female, age 85, both hemispheres 24.3
1867 Male, age 76, both hemispheres 24.1
Parahippocampal cortex
nTPM: 24.0
2245 Female, age 91, both hemispheres 31.4
2018 Male, age 76, both hemispheres 28.8
2250 Female, age 67, right hemisphere 24.2
1990 Female, age 91, right hemisphere 23.8
2622 Female, age 67, right hemisphere 23.2
2532 Female, age 72, left hemisphere 23.0
1850 Male, age 80, both hemispheres 22.5
2692 Male, age 74, both hemispheres 22.5
1933 Female, age 85, both hemispheres 21.7
2693 Female, age 94, both hemispheres 19.0
Perirhinal gyrus
nTPM: 23.7
1794 Male, age 80, right hemisphere 27.6
1847 Female, age 91, left hemisphere 26.9
2521 Female, age 94, right hemisphere 25.0
1841 Female, age 85, right hemisphere 21.8
2848 Male, age 76, right hemisphere 17.1
Subiculum
nTPM: 22.9
1901 Male, age 80, both hemispheres 24.9
1977 Female, age 85, both hemispheres 24.9
2729 Female, age 91, right hemisphere 24.8
2619 Male, age 74, both hemispheres 23.0
2042 Male, age 76, both hemispheres 22.0
2438 Female, age 94, left hemisphere 17.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 62.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 62.3
Samples: 197

Max nTPM: 170.5
Min nTPM: 17.8
Std nTPM: 27.6
Median nTPM: 57.6
GTEX-13PDP-0011-R1a-SM-5PNX5 60-69 years, male 170.5
GTEX-144GL-0011-R1a-SM-5PNZ5 50-59 years, male 136.0
GTEX-WVLH-0011-R1A-SM-4MVOK 50-59 years, male 136.0
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 134.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 130.3
GTEX-13112-0011-R1b-SM-5HL7K 50-59 years, male 126.1
GTEX-YFC4-0011-R1a-SM-4V6EH 40-49 years, female 123.3
GTEX-1GMR8-0011-R1b-SM-CJI2O 50-59 years, female 121.0
GTEX-13FTY-0011-R1a-SM-5LZXE 40-49 years, female 119.9
GTEX-13O3Q-0011-R1b-SM-5KM3L 50-59 years, male 118.9
GTEX-1F75A-0011-R1b-SM-CE6RA 50-59 years, male 115.5
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 23.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 23.9
FF:10153-102I9 76 years, female 24.7
FF:10169-103B7 60 years, female 23.0

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 17.9
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 17.0
Samples: 4

Max nTPM: 23.0
Min nTPM: 10.9
Sample A Female 23.0
Sample B Female 17.0
Sample C Male 17.0
Sample D Male 10.9
Entorhinal cortex
nTPM: 17.1
Samples: 4

Max nTPM: 20.7
Min nTPM: 15.1
Sample A Female 16.6
Sample B Female 16.1
Sample C Male 20.7
Sample D Male 15.1
Subiculum
nTPM: 16.9
Samples: 4

Max nTPM: 23.2
Min nTPM: 12.4
Sample A Female 23.2
Sample B Female 16.3
Sample C Male 15.7
Sample D Male 12.4
Ventral hippocampus
nTPM: 17.9
Samples: 4

Max nTPM: 23.3
Min nTPM: 13.2
Sample A Female 16.0
Sample B Female 13.2
Sample C Male 23.3
Sample D Male 19.0

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 55.6
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 55.6
Samples: 4

Max nTPM: 58.5
Min nTPM: 52.3
Sample A Male 57.9
Sample B Male 53.6
Sample C Female 52.3
Sample D Female 58.5
Hippocampal formation
nTPM: 54.9
Samples: 4

Max nTPM: 57.8
Min nTPM: 51.1
Sample A Male 57.8
Sample B Male 51.1
Sample C Female 55.2
Sample D Female 55.3

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 15.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 15.4
393240 Antisense, RP_040804_02_G09, Mouse strain C57BL/6J (56 days, male) 15.4

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