HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: High
Neuronal cells: Low
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:154.6 nTPM
HPA:154.6 nTPM
GTEx:167.3 nTPM
FANTOM5:234.8 Scaled Tags Per Million
Pig:1.3 nTPM
Mouse:0.1 nTPM
Allen mouse:5.2 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA018433Antibody CAB034291
Glial cells HighHigh
Neuronal cells LowLow





HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 154.6
Sample id Sample description nTPM
Hippocampus
nTPM: 143.0
2529 Female, age 94, left hemisphere 153.3
1911 Female, age 85, right hemisphere 146.8
1898 Male, age 80, left hemisphere 146.3
2621 Female, age 67, right hemisphere 141.2
1855 Male, age 76, left hemisphere 136.4
2148 Female, age 91, left hemisphere 134.1
Dentate gyrus
nTPM: 139.1
2530 Female, age 94, left hemisphere 151.8
2528 Male, age 74, both hemispheres 147.4
2010 Male, age 76, both hemispheres 145.0
2246 Female, age 85, both hemispheres 135.5
2531 Female, age 67, both hemispheres 127.9
1927 Female, age 91, both hemispheres 126.8
Entorhinal gyrus
nTPM: 140.9
2117 Female, age 91, right hemisphere 169.9
2764 Male, age 80, right hemisphere 152.2
1938 Female, age 85, left hemisphere 139.8
2613 Female, age 94, left hemisphere 130.4
1787 Male, age 76, left hemisphere 129.5
2686 Male, age 75, right hemisphere 123.5
Hippocampus, CA1
nTPM: 138.0
2527 Male, age 74, both hemispheres 151.9
2749 Male, age 80, left hemisphere 140.1
1873 Female, age 85, both hemispheres 137.1
2082 Female, age 91, right hemisphere 137.0
2045 Male, age 76, both hemispheres 124.1
Hippocampus, CA2
nTPM: 143.7
2249 Male, age 74, both hemispheres 170.9
1963 Male, age 80, left hemisphere 149.6
2113 Female, age 91, right hemisphere 141.4
2437 Female, age 94, left hemisphere 138.5
1940 Female, age 85, left hemisphere 136.8
1892 Male, age 76, both hemispheres 125.2
Hippocampus, CA3
nTPM: 143.1
2436 Male, age 74, both hemispheres 194.7
1891 Female, age 85, both hemispheres 155.3
1867 Male, age 76, both hemispheres 138.6
2620 Female, age 94, left hemisphere 128.3
2137 Male, age 80, left hemisphere 128.0
2861 Female, age 67, both hemispheres 113.5
Parahippocampal cortex
nTPM: 135.9
2692 Male, age 74, both hemispheres 147.0
2532 Female, age 72, left hemisphere 145.9
1990 Female, age 91, right hemisphere 143.3
2018 Male, age 76, both hemispheres 138.9
1850 Male, age 80, both hemispheres 138.1
1933 Female, age 85, both hemispheres 136.7
2245 Female, age 91, both hemispheres 136.6
2250 Female, age 67, right hemisphere 129.1
2693 Female, age 94, both hemispheres 125.9
2622 Female, age 67, right hemisphere 117.9
Perirhinal gyrus
nTPM: 126.6
2521 Female, age 94, right hemisphere 132.0
1794 Male, age 80, right hemisphere 129.5
1847 Female, age 91, left hemisphere 128.5
1841 Female, age 85, right hemisphere 121.9
2848 Male, age 76, right hemisphere 120.9
Subiculum
nTPM: 154.6
2042 Male, age 76, both hemispheres 167.9
1901 Male, age 80, both hemispheres 164.8
2438 Female, age 94, left hemisphere 153.3
1977 Female, age 85, both hemispheres 151.8
2619 Male, age 74, both hemispheres 150.0
2729 Female, age 91, right hemisphere 140.0

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 167.3
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 167.3
Samples: 197

Max nTPM: 387.9
Min nTPM: 50.8
Std nTPM: 68.1
Median nTPM: 153.8
GTEX-1LB8K-0011-R1b-SM-EZ6MV 50-59 years, male 387.9
GTEX-18A6Q-0011-R1b-SM-731DI 60-69 years, male 378.9
GTEX-13QIC-0011-R1a-SM-5O9CJ 60-69 years, female 353.3
GTEX-17EVP-0011-R1a-SM-7DHLA 40-49 years, male 349.3
GTEX-13OW5-0011-R1b-SM-5L3GE 60-69 years, male 342.8
GTEX-11TUW-0011-R1a-SM-DO92S 60-69 years, male 326.4
GTEX-1H23P-0011-R1a-SM-ACKVC 60-69 years, male 313.2
GTEX-13OVL-0011-R1a-SM-5L3H5 50-59 years, male 311.0
GTEX-1CB4J-0011-R1a-SM-9WG64 60-69 years, male 300.8
GTEX-13N1W-0011-R1b-SM-5MR4T 70-79 years, male 294.0
GTEX-17MF6-0011-R1a-SM-72D6O 40-49 years, male 290.2
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 234.8
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 234.8
FF:10169-103B7 60 years, female 259.4
FF:10153-102I9 76 years, female 210.1

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 1.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 21.4
Samples: 4

Max nTPM: 31.1
Min nTPM: 15.2
Sample A Female 31.1
Sample B Female 18.2
Sample C Male 20.9
Sample D Male 15.2
Entorhinal cortex
nTPM: 13.2
Samples: 4

Max nTPM: 14.4
Min nTPM: 12.4
Sample A Female 13.4
Sample B Female 14.4
Sample C Male 12.7
Sample D Male 12.4
Subiculum
nTPM: 15.5
Samples: 4

Max nTPM: 18.8
Min nTPM: 13.1
Sample A Female 18.8
Sample B Female 15.1
Sample C Male 13.1
Sample D Male 15.1
Ventral hippocampus
nTPM: 17.6
Samples: 4

Max nTPM: 20.6
Min nTPM: 11.9
Sample A Female 20.6
Sample B Female 11.9
Sample C Male 18.4
Sample D Male 19.6

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 0.1
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 68.6
Samples: 4

Max nTPM: 78.5
Min nTPM: 59.7
Sample A Male 61.9
Sample B Male 78.5
Sample C Female 74.1
Sample D Female 59.7
Hippocampal formation
nTPM: 64.0
Samples: 4

Max nTPM: 76.8
Min nTPM: 51.9
Sample A Male 76.8
Sample B Male 58.3
Sample C Female 51.9
Sample D Female 69.1

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 5.2
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 5.2
68301431 Antisense, RP_041130_01_C04, Mouse strain C57BL/6J (56 days, male) 5.2
Hippocampal formation
Expression energy: 5.2
68301431 Antisense, RP_041130_01_C04, Mouse strain C57BL/6J (56 days, male) 5.2

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The Human Protein Atlas

The Human Protein Atlas project is funded
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