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  • PSMD4
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:143.8 nTPM
FANTOM5:85.6 Scaled Tags Per Million
Pig:50.3 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA038807Antibody HPA039252Antibody CAB047300
Glial cells LowNot detectedLow
Neuronal cells HighHighMedium







CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 143.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 143.8
Samples: 246

Max nTPM: 260.3
Min nTPM: 77.5
Std nTPM: 32.2
Median nTPM: 138.2
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 260.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 251.7
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 241.2
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 229.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 221.9
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 220.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 220.4
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 219.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 214.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 210.5
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 210.1
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 209.0
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 207.0
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 200.2
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 198.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 197.7
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 197.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 196.0
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 193.4
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 192.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 190.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 190.1
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 187.7
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 187.3
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 185.6
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 184.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 184.5
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 184.3
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 184.1
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 183.8
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 182.0
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 181.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 180.6
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 180.5
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 179.7
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 178.9
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 177.5
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 177.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 176.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 175.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 174.7
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 173.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 173.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 172.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 172.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 172.2
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 171.9
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 171.8
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 171.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 171.1
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 169.5
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 169.3
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 169.1
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 168.0
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 167.9
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 167.4
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 167.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 166.9
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 165.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 164.4
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 163.8
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 163.6
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 162.3
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 161.4
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 160.6
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 160.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 159.9
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 158.7
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 157.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 156.3
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 156.1
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 155.9
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 155.1
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 155.0
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 154.8
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 154.8
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 154.3
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 153.5
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 153.1
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 152.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 152.5
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 152.3
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 152.0
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 151.8
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 151.1
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 150.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 150.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 150.1
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 149.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 149.8
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 149.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 149.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 149.1
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 148.4
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 147.4
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 147.0
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 146.9
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 146.9
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 146.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 146.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 146.0
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 145.7
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 145.2
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 144.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 144.5
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 143.6
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 143.1
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 142.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 142.6
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 142.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 142.1
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 142.1
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 141.6
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 141.1
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 140.5
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 140.2
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 140.1
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 140.1
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 140.0
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 139.8
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 139.0
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 138.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 138.5
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 137.9
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 137.1
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 136.9
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 136.9
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 136.8
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 136.8
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 136.7
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 136.2
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 136.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 135.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 135.8
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 135.6
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 135.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 135.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 135.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 135.1
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 135.0
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 134.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 134.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 134.4
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 134.4
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 134.3
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 133.9
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 133.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 133.7
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 133.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 132.8
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 132.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 132.1
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 131.9
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 130.8
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 130.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 130.1
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 129.8
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 129.7
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 129.6
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 129.1
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 128.8
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 128.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 128.4
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 128.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 128.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 127.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 126.9
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 126.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 126.3
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 125.2
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 125.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 124.5
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 124.3
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 123.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 123.7
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 123.7
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 123.3
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 122.9
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 122.1
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 122.0
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 121.4
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 121.4
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 120.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 120.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 120.0
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 119.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 119.0
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 118.7
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 118.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 118.0
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 117.9
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 117.7
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 117.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 116.7
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 116.0
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 116.0
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 114.5
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 114.4
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 114.4
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 114.3
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 114.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 113.8
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 113.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 113.4
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 112.9
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 112.6
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 112.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 112.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 112.3
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 111.9
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 111.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 111.2
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 111.0
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 110.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 110.7
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 110.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 110.0
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 109.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 109.1
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 108.8
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 108.5
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 107.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 107.8
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 107.7
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 107.7
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 106.4
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 105.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 105.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 105.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 105.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 103.7
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 103.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 100.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 97.5
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 96.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 95.2
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 94.6
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 94.2
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 93.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 93.5
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 91.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 89.7
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 88.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 87.9
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 87.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 77.5
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 85.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 85.6
FF:10164-103B2 76 years, female 85.6

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 50.3
Pig sample Sample description nTPM
Caudate
nTPM: 50.3
Samples: 4

Max nTPM: 59.8
Min nTPM: 44.6
Sample A Female 45.5
Sample B Female 51.2
Sample C Male 59.8
Sample D Male 44.6

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