HIPPOCAMPAL FORMATION - Expression summary
Protein expression
Hippocampusi
h
m
l
n
Glial cells: Not detected
Neuronal cells: High
Protein profiling
Multiplex tissuei
RNA expressioni
Consensus:46.7 nTPM
HPA:46.7 nTPM
GTEx:58.1 nTPM
FANTOM5:66.9 Scaled Tags Per Million
Pig:62.3 nTPM
Mouse:43.4 nTPM
Allen mouse:10.4 Expression energy

HIPPOCAMPUS - Antibody stainingi
Antibody HPA050910Antibody HPA054717Antibody CAB037038Antibody CAB037111
Glial cells Not detectedNot detectedMediumMedium
Neuronal cells HighMediumHighMedium









HIPPOCAMPAL FORMATION - HPA Brain RNA-seq
Max nTPM 46.7
Sample id Sample description nTPM
Hippocampus
nTPM: 40.8
2621 Female, age 67, right hemisphere 59.1
1898 Male, age 80, left hemisphere 50.9
1855 Male, age 76, left hemisphere 42.4
2148 Female, age 91, left hemisphere 40.3
2529 Female, age 94, left hemisphere 28.9
1911 Female, age 85, right hemisphere 23.0
Dentate gyrus
nTPM: 44.1
2530 Female, age 94, left hemisphere 70.8
1927 Female, age 91, both hemispheres 55.0
2010 Male, age 76, both hemispheres 45.5
2246 Female, age 85, both hemispheres 32.0
2528 Male, age 74, both hemispheres 31.8
2531 Female, age 67, both hemispheres 29.5
Entorhinal gyrus
nTPM: 44.9
2613 Female, age 94, left hemisphere 75.5
2764 Male, age 80, right hemisphere 50.4
1787 Male, age 76, left hemisphere 49.4
1938 Female, age 85, left hemisphere 42.2
2686 Male, age 75, right hemisphere 29.7
2117 Female, age 91, right hemisphere 22.0
Hippocampus, CA1
nTPM: 46.2
2749 Male, age 80, left hemisphere 93.4
1873 Female, age 85, both hemispheres 42.3
2527 Male, age 74, both hemispheres 42.0
2082 Female, age 91, right hemisphere 28.7
2045 Male, age 76, both hemispheres 24.5
Hippocampus, CA2
nTPM: 44.9
1892 Male, age 76, both hemispheres 68.2
2437 Female, age 94, left hemisphere 65.7
1963 Male, age 80, left hemisphere 58.9
2249 Male, age 74, both hemispheres 34.7
2113 Female, age 91, right hemisphere 22.7
1940 Female, age 85, left hemisphere 19.3
Hippocampus, CA3
nTPM: 43.3
2861 Female, age 67, both hemispheres 56.9
2137 Male, age 80, left hemisphere 56.2
1867 Male, age 76, both hemispheres 50.1
2620 Female, age 94, left hemisphere 37.1
2436 Male, age 74, both hemispheres 31.0
1891 Female, age 85, both hemispheres 28.5
Parahippocampal cortex
nTPM: 40.3
2622 Female, age 67, right hemisphere 51.2
2250 Female, age 67, right hemisphere 49.4
2245 Female, age 91, both hemispheres 45.3
1990 Female, age 91, right hemisphere 44.6
2693 Female, age 94, both hemispheres 42.2
1933 Female, age 85, both hemispheres 38.8
1850 Male, age 80, both hemispheres 37.7
2532 Female, age 72, left hemisphere 33.2
2692 Male, age 74, both hemispheres 32.8
2018 Male, age 76, both hemispheres 27.5
Perirhinal gyrus
nTPM: 46.7
1847 Female, age 91, left hemisphere 62.3
2521 Female, age 94, right hemisphere 59.1
1794 Male, age 80, right hemisphere 45.7
2848 Male, age 76, right hemisphere 33.9
1841 Female, age 85, right hemisphere 32.4
Subiculum
nTPM: 36.9
2438 Female, age 94, left hemisphere 54.2
2619 Male, age 74, both hemispheres 43.0
1977 Female, age 85, both hemispheres 41.8
1901 Male, age 80, both hemispheres 40.6
2729 Female, age 91, right hemisphere 21.4
2042 Male, age 76, both hemispheres 20.5

HIPPOCAMPAL FORMATION - GTEx RNA-seqi
Average nTPM 58.1
GTEx sample id Sample description nTPM
Brain - Hippocampus
Average nTPM: 58.1
Samples: 197

Max nTPM: 148.2
Min nTPM: 11.6
Std nTPM: 28.9
Median nTPM: 52.6
GTEX-1GF9W-0011-R1a-SM-9QEIQ 60-69 years, male 148.2
GTEX-139TT-0011-R1a-SM-5LZVD 60-69 years, male 141.1
GTEX-WHSE-0011-R1A-SM-3P5ZK 20-29 years, male 131.1
GTEX-13O3O-0011-R1b-SM-5KM2K 60-69 years, female 124.6
GTEX-N7MS-0011-R1a-SM-2HMJG 60-69 years, male 124.4
GTEX-Q2AG-0011-R1A-SM-2HMJI 40-49 years, female 121.4
GTEX-13FXS-0011-R1a-SM-5K7U6 50-59 years, male 120.9
GTEX-13JUV-0011-R1a-SM-5LZY4 40-49 years, female 117.8
GTEX-1EX96-0011-R1a-SM-CE6R5 50-59 years, male 117.8
GTEX-12WSF-0011-R1a-SM-5DUVI 70-79 years, male 116.2
GTEX-13FLW-0011-R1b-SM-5LZX2 50-59 years, male 111.6
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HIPPOCAMPAL FORMATION - FANTOM5 CAGEi
Max Scaled Tags Per Million 66.9
FANTOM5 sample id Sample description Scaled Tags Per Million
Hippocampus
Scaled Tags Per Million: 66.9
FF:10169-103B7 60 years, female 73.2
FF:10153-102I9 76 years, female 60.7

HIPPOCAMPAL FORMATION - Pig RNA-seqi
Average nTPM 62.3
Pig sample Sample description nTPM
Dorsal hippocampus
nTPM: 60.1
Samples: 4

Max nTPM: 81.7
Min nTPM: 41.3
Sample A Female 81.7
Sample B Female 63.9
Sample C Male 53.4
Sample D Male 41.3
Entorhinal cortex
nTPM: 56.5
Samples: 4

Max nTPM: 63.1
Min nTPM: 48.8
Sample A Female 60.1
Sample B Female 53.8
Sample C Male 63.1
Sample D Male 48.8
Subiculum
nTPM: 58.4
Samples: 4

Max nTPM: 78.4
Min nTPM: 49.2
Sample A Female 78.4
Sample B Female 49.2
Sample C Male 56.3
Sample D Male 49.8
Ventral hippocampus
nTPM: 62.3
Samples: 4

Max nTPM: 81.0
Min nTPM: 39.7
Sample A Female 65.4
Sample B Female 39.7
Sample C Male 81.0
Sample D Male 63.2

HIPPOCAMPAL FORMATION - Mouse RNA-seqi
Average nTPM 43.4
Mouse sample Sample description nTPM
Entorhinal cortex
nTPM: 43.4
Samples: 4

Max nTPM: 46.8
Min nTPM: 38.9
Sample A Male 44.9
Sample B Male 43.1
Sample C Female 38.9
Sample D Female 46.8
Hippocampal formation
nTPM: 41.5
Samples: 4

Max nTPM: 44.9
Min nTPM: 36.7
Sample A Male 36.7
Sample B Male 43.9
Sample C Female 40.5
Sample D Female 44.9

HIPPOCAMPAL FORMATION - Allen Mouse ISHi
Max Expression energy 10.4
Allen experiment id Experiment description Expression energy
Hippocampal formation
Expression energy: 10.4
68160844 Antisense, RP_041122_01_B05, Mouse strain C57BL/6J (56 days, male) 10.4

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