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  • PSMB4
TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Low
Neuronal cells: Low
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:162.7 nTPM
FANTOM5:75.0 Scaled Tags Per Million
Pig:57.6 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA006700
Glial cells Low
Neuronal cells Low



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 162.7
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 162.7
Samples: 246

Max nTPM: 293.3
Min nTPM: 104.4
Std nTPM: 34.1
Median nTPM: 155.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 293.3
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 286.5
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 282.8
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 282.4
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 278.0
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 275.5
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 260.3
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 258.3
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 255.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 250.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 244.2
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 239.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 227.8
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 224.2
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 221.7
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 221.5
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 218.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 214.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 210.2
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 209.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 209.8
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 209.6
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 208.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 208.3
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 203.4
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 200.8
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 199.8
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 198.8
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 198.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 197.7
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 196.0
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 194.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 193.9
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 192.9
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 192.9
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 192.3
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 191.9
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 190.1
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 190.0
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 189.9
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 189.1
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 188.2
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 188.2
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 188.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 187.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 186.0
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 185.3
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 185.2
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 185.0
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 184.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 183.5
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 182.8
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 181.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 181.1
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 180.4
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 180.2
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 179.5
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 179.4
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 179.1
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 177.3
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 176.1
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 176.1
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 175.9
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 175.8
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 175.4
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 175.2
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 174.8
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 174.4
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 173.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 173.6
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 172.6
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 172.0
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 170.4
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 170.3
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 170.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 169.8
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 169.7
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 169.4
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 169.4
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 167.6
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 167.6
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 167.3
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 167.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 167.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 167.0
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 166.9
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 165.6
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 165.6
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 165.3
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 165.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 164.7
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 164.3
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 163.9
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 163.6
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 163.1
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 163.0
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 162.7
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 162.6
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 162.4
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 162.3
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 162.2
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 161.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 161.1
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 160.4
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 160.3
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 159.9
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 159.7
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 159.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 158.8
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 158.8
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 158.8
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 158.6
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 158.6
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 157.4
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 157.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 157.1
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 157.0
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 156.9
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 156.9
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 156.6
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 156.4
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 156.3
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 155.9
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 155.9
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 155.2
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 154.7
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 154.5
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 154.4
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 153.9
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 153.8
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 153.2
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 153.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 153.0
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 152.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 152.4
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 152.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 152.3
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 151.7
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 151.5
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 151.2
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 150.7
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 150.7
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 150.1
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 149.7
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 149.7
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 149.6
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 149.4
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 149.1
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 149.1
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 149.0
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 148.9
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 148.7
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 148.7
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 148.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 148.3
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 148.3
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 148.2
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 148.0
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 148.0
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 147.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 147.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 147.6
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 147.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 146.3
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 146.1
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 145.6
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 145.2
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 145.2
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 144.9
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 144.3
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 144.1
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 143.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 143.9
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 143.7
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 143.5
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 143.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 143.3
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 143.1
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 142.7
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 142.5
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 141.8
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 141.2
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 140.7
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 140.6
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 140.6
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 140.4
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 139.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 139.4
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 139.2
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 139.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 138.3
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 138.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 138.0
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 138.0
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 137.9
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 137.8
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 137.8
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 137.5
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 137.0
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 136.7
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 136.5
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 136.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 136.0
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 135.9
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 134.9
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 134.1
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 134.0
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 133.9
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 133.6
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 133.5
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 133.1
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 133.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 132.4
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 132.3
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 131.1
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 130.9
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 129.8
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 129.1
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 129.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 128.8
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 128.0
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 127.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 127.4
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 127.3
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 125.8
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 125.8
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 124.4
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 123.6
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 123.6
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 123.4
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 122.2
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 121.3
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 120.1
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 120.1
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 120.1
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 120.0
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 119.1
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 118.8
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 117.5
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 115.8
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 115.5
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 115.5
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 113.0
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 109.3
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 105.9
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 104.4
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 75.0
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 75.0
FF:10164-103B2 76 years, female 75.0

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 57.6
Pig sample Sample description nTPM
Caudate
nTPM: 57.6
Samples: 4

Max nTPM: 62.0
Min nTPM: 48.9
Sample A Female 58.6
Sample B Female 62.0
Sample C Male 60.8
Sample D Male 48.9

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