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CELF3
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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Low
Neuronal cells: Medium
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:64.8 nTPM
FANTOM5:102.4 Scaled Tags Per Million
Pig:65.0 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA006292
Glial cells Low
Neuronal cells Medium


CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 64.8
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 64.8
Samples: 246

Max nTPM: 143.8
Min nTPM: 7.1
Std nTPM: 27.7
Median nTPM: 68.5
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 143.8
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 133.7
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 126.2
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 119.1
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 116.4
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 113.8
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 112.7
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 111.0
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 111.0
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 110.8
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 108.7
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 107.0
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 106.4
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 106.4
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 105.8
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 103.7
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 103.3
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 103.3
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 102.6
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 101.8
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 101.2
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 100.2
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 99.9
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 99.1
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 98.8
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 98.4
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 98.3
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 98.1
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 97.9
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 97.3
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 97.1
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 96.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 95.2
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 94.9
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 94.6
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 94.3
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 93.8
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 93.0
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 92.6
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 92.4
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 92.0
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 91.9
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 91.4
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 90.5
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 89.8
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 89.5
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 89.5
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 89.0
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 89.0
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 88.9
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 88.4
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 88.0
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 87.4
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 87.2
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 87.1
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 87.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 86.5
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 85.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 85.7
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 84.8
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 84.4
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 84.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 84.1
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 83.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 82.6
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 82.3
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 82.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 82.2
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 82.0
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 81.9
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 81.7
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 81.7
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 81.7
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 81.7
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 81.7
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 81.2
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 81.2
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 81.0
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 80.4
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 80.2
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 79.7
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 79.4
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 79.0
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 78.3
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 77.9
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 77.8
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 77.7
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 77.7
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 77.5
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 77.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 77.2
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 75.9
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 75.5
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 75.5
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 75.4
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 75.0
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 73.6
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 73.3
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 73.0
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 73.0
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 72.9
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 72.8
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 72.6
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 72.5
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 72.2
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 71.8
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 71.8
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 71.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 71.5
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 71.3
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 71.2
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 70.7
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 70.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 70.3
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 70.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 69.9
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 69.9
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 69.7
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 69.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 69.4
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 68.9
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 68.8
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 68.6
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 68.5
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 67.8
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 67.2
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 67.0
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 67.0
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 66.1
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 65.6
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 65.6
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 65.2
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 65.1
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 63.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 63.6
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 63.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 63.2
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 62.7
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 62.6
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 62.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 62.4
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 62.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 62.3
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 61.7
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 61.6
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 60.4
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 60.0
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 59.2
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 59.0
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 58.9
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 58.9
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 58.8
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 58.8
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 58.7
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 57.6
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 57.3
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 56.6
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 56.0
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 55.8
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 55.7
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 55.4
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 55.3
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 55.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 54.7
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 54.6
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 54.3
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 53.4
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 53.0
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 53.0
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 52.9
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 52.3
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 50.7
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 50.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 49.7
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 49.1
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 49.0
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 48.9
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 48.3
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 47.9
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 47.7
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 45.6
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 45.6
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 45.0
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 44.9
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 44.9
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 43.1
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 42.4
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 42.0
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 40.3
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 39.6
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 39.4
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 39.1
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 38.8
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 38.7
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 38.3
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 37.7
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 37.6
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 37.2
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 37.1
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 36.7
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 36.6
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 36.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 36.2
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 35.5
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 35.3
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 35.0
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 34.6
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 34.6
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 34.3
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 32.7
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 32.5
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 31.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 29.9
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 28.0
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 27.6
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 26.5
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 25.1
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 24.9
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 24.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 23.8
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 23.8
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 23.7
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 23.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 23.0
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 21.8
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 21.6
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 21.4
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 21.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 20.9
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 20.7
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 20.5
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 17.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 17.3
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 17.2
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 16.7
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 15.6
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 15.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 13.6
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 13.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 12.8
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 12.5
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 10.1
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 7.5
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 7.4
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 7.3
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 7.1
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 102.4
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 102.4
FF:10164-103B2 76 years, female 102.4

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 65.0
Pig sample Sample description nTPM
Caudate
nTPM: 65.0
Samples: 4

Max nTPM: 74.2
Min nTPM: 51.2
Sample A Female 51.2
Sample B Female 72.6
Sample C Male 74.2
Sample D Male 62.1

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