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TISSUE PRIMARY DATA CAUDATE Show tissue menu
ADIPOSE TISSUE ADRENAL GLAND AMYGDALA APPENDIX BASAL GANGLIA BONE MARROW BREAST BRONCHUS CEREBELLUM CEREBRAL CORTEX CERVIX CHOROID PLEXUS COLON DUODENUM ENDOMETRIUM
EPIDIDYMIS ESOPHAGUS FALLOPIAN TUBE GALLBLADDER HEART MUSCLE HIPPOCAMPAL FORMATION HYPOTHALAMUS KIDNEY LIVER LUNG LYMPH NODE MEDULLA OBLONGATA MIDBRAIN NASOPHARYNX ORAL MUCOSA
OVARY PANCREAS PARATHYROID GLAND PITUITARY GLAND PLACENTA PONS PROSTATE RECTUM RETINA SALIVARY GLAND SEMINAL VESICLE SKELETAL MUSCLE SKIN SMALL INTESTINE SMOOTH MUSCLE
SOFT TISSUE SPINAL CORD SPLEEN STOMACH TESTIS THALAMUS THYMUS THYROID GLAND TONGUE TONSIL URINARY BLADDER VAGINA WHITE MATTER
ANTIBODIES
AND
VALIDATION
Dictionary
Caudate
Tissue proteome
CAUDATE - Expression summary
Protein expression
Caudatei

On the top, protein expression in current human tissue, based on all annotated cell types, is reported with the units not detected (n), low (l), medium (m) and high (h). Underneath, protein expression in each annotated cell type are reported using the same units.

Protein expression data is based on knowledge-based annotation. For genes where more than one antibody has been used, a collective score is set.

If knowledge-based annotation could not be performed for a gene, no data is displayed here. View antibody staining data further down this page.

Read more
h
m
l
n
Glial cells: Not detected
Neuronal cells: Not detected
Protein profiling
Multiplex tissuei

A summary of the protein localization in the current human tissue based on multiplex immunohistochemistry profiling in selected tissues is shown for genes where this analysis has been performed.

RNA expressioni

A summary of mRNA expression data available for current tissue based on several datasets. The mRNA expression levels in human tissues are based on RNA-seq data generated by the Human Protein Atlas (HPA), Genotype-Tissue Expression (GTEx) portal and CAGE data generated by the FANTOM5 consortium. Consensus normalized expression levels for human tissues was created by combining the data from HPA and GTEx datasets.

The mRNA expression levels in pig are based on RNA-seq data generated by the Human Protein Atlas (HPA), and for mouse, HPA data and in situ hybridization generated by the Allen brain atlas are reported.

Scroll down to view mRNA expression data in more detail.
Read more
GTEx:150.6 nTPM
FANTOM5:44.6 Scaled Tags Per Million
Pig:10.7 nTPM

CAUDATE - Antibody stainingi

Antibody staining in the annotated cell types in the current human tissue is reported as not detected, low, medium, or high, based on conventional immunohistochemistry profiling in selected tissues. This score is based on the combination of the staining intensity and fraction of stained cells.

Each image is clickable and will lead to virtual microscopy that enables deeper exploration of all samples and also displays staining intensity scores, fraction scores and subcellular localization as well as patient and tissue information for each sample.

Read more
Antibody HPA061691
Glial cells Not detected
Neuronal cells Not detected



CAUDATE - GTEx RNA-seqi

RNA-Seq data generated by the Genotype-Tissue Expression (GTEx) project from human tissues is reported as mean nTPM. More information can be found on the GTEx portal.

Distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 150.6
GTEx sample id Sample description nTPM
Brain - Caudate (basal ganglia)
Average nTPM: 150.6
Samples: 246

Max nTPM: 974.3
Min nTPM: 12.8
Std nTPM: 145.0
Median nTPM: 108.2
GTEX-1F75B-0011-R5a-SM-9QEHC 50-59 years, male 974.3
GTEX-ZDXO-0011-R5a-SM-4WKG5 60-69 years, male 898.4
GTEX-1IL2V-0011-R5a-SM-ARL78 70-79 years, male 821.5
GTEX-139TU-0011-R5b-SM-5L3E1 60-69 years, male 779.1
GTEX-1H3VE-0011-R5a-SM-CKZOU 40-49 years, male 672.4
GTEX-15G19-0011-R5b-SM-6M46P 60-69 years, male 665.1
GTEX-13PL6-0011-R5b-SM-5O9BI 40-49 years, female 651.3
GTEX-139TS-0011-R5b-SM-5J2MZ 60-69 years, male 606.5
GTEX-1A8G6-0011-R5b-SM-7IGQG 60-69 years, male 589.0
GTEX-1J8JJ-0011-R5a-SM-D4P2G 60-69 years, female 534.2
GTEX-15SHU-0011-R5a-SM-7938Q 40-49 years, female 505.7
GTEX-1GPI6-0011-R5a-SM-CJI2W 60-69 years, male 448.9
GTEX-1CB4G-0011-R5a-SM-CKZNM 60-69 years, male 444.5
GTEX-XMD1-0011-R5A-SM-4AT47 60-69 years, male 439.7
GTEX-1GN2E-0011-R5b-SM-CJI2M 60-69 years, male 375.3
GTEX-1I1HK-0011-R5b-SM-ARU6S 60-69 years, male 373.8
GTEX-13PLJ-0011-R5a-SM-5O9BG 60-69 years, female 352.6
GTEX-12WSA-0011-R5b-SM-5GU5I 60-69 years, male 344.2
GTEX-1IKK5-0011-R5b-SM-CL55B 60-69 years, male 322.8
GTEX-1I19N-0011-R5b-SM-ARU6X 70-79 years, male 317.1
GTEX-17HII-0011-R5a-SM-7LG51 50-59 years, male 304.5
GTEX-1HBPH-0011-R5b-SM-A9G1R 40-49 years, female 303.7
GTEX-1EX96-0011-R5a-SM-ARU83 50-59 years, male 291.3
GTEX-13OW6-0011-R5a-SM-5O9BK 50-59 years, male 287.8
GTEX-1RNSC-0011-R5a-SM-EZ6N5 60-69 years, male 274.3
GTEX-1EH9U-0011-R5a-SM-CJI2K 60-69 years, male 271.2
GTEX-YFC4-0011-R5a-SM-4RGLR 40-49 years, female 266.6
GTEX-16YQH-0011-R5b-SM-7938U 30-39 years, male 266.4
GTEX-14PJO-0011-R5a-SM-6AJBZ 60-69 years, male 257.2
GTEX-1CAV2-0011-R5b-SM-9QEH4 40-49 years, female 247.9
GTEX-Y8DK-0011-R5B-SM-4RTW6 60-69 years, male 243.9
GTEX-1399T-0011-R5b-SM-5IJDK 60-69 years, male 241.6
GTEX-1E1VI-0011-R5b-SM-9WG5V 50-59 years, male 240.0
GTEX-1C6VS-0011-R5a-SM-7MXU9 60-69 years, male 234.5
GTEX-17F97-0011-R5a-SM-7LG4Z 50-59 years, male 222.2
GTEX-16NPV-0011-R5a-SM-7EPGK 50-59 years, female 221.9
GTEX-13CF2-0011-R5a-SM-5LZWS 60-69 years, male 220.2
GTEX-14PQA-0011-R5b-SM-6AJC2 50-59 years, female 212.9
GTEX-1C6VR-0011-R5a-SM-9QEH1 60-69 years, male 209.1
GTEX-132Q8-0011-R5a-SM-5IJDM 60-69 years, male 205.7
GTEX-1IKOH-0011-R5a-SM-ARU8C 60-69 years, female 204.7
GTEX-1I1GR-0011-R5a-SM-CMKHD 60-69 years, male 201.9
GTEX-11O72-0011-R5a-SM-DO922 40-49 years, male 198.2
GTEX-ZE7O-0011-R5a-SM-57WBO 50-59 years, female 195.6
GTEX-1EN7A-0011-R5a-SM-9QEH6 40-49 years, male 192.4
GTEX-1IL2U-0011-R5a-SM-CE6SN 60-69 years, male 191.8
GTEX-13SLW-0011-R5b-SM-5SI6Z 70-79 years, male 188.5
GTEX-WL46-0011-R5A-SM-3LK6V 50-59 years, male 188.3
GTEX-YJ89-0011-R5a-SM-4V6GM 60-69 years, male 187.9
GTEX-17HG3-0011-R5a-SM-7DUEW 30-39 years, female 185.0
GTEX-11WQC-0011-R5a-SM-5BC74 60-69 years, male 183.7
GTEX-11DXW-0011-R5b-SM-DO11D 40-49 years, male 181.8
GTEX-17EVP-0011-R5b-SM-7DHKW 40-49 years, male 181.2
GTEX-12WSD-0011-R5b-SM-5CVNG 60-69 years, female 181.1
GTEX-1JMPZ-0011-R5b-SM-EYYWY 30-39 years, male 178.6
GTEX-12WSH-0011-R5b-SM-5P9F3 50-59 years, male 177.8
GTEX-17HHY-0011-R5b-SM-79OMZ 50-59 years, male 176.3
GTEX-13NZA-0011-R5b-SM-5KM4K 60-69 years, male 170.0
GTEX-1R9PO-0011-R5a-SM-EZ6NA 60-69 years, female 166.6
GTEX-145LS-0011-R5a-SM-5SI65 60-69 years, female 165.7
GTEX-1IGQW-0011-R5b-SM-CJI44 60-69 years, male 162.3
GTEX-1J8EW-0011-R5b-SM-ARU8B 60-69 years, female 160.4
GTEX-1GF9V-0011-R5a-SM-9QEI8 60-69 years, male 159.7
GTEX-QMR6-0011-R5A-SM-32PKT 50-59 years, male 159.4
GTEX-1E2YA-0011-R5a-SM-9QEGT 50-59 years, male 159.3
GTEX-1I1GS-0011-R5a-SM-CKZPC 60-69 years, male 158.8
GTEX-QDT8-0011-R5A-SM-32PKN 30-39 years, female 158.5
GTEX-13JVG-0011-R5a-SM-5MR4O 60-69 years, male 158.0
GTEX-11OF3-0011-R5a-SM-57WB4 60-69 years, male 157.6
GTEX-1HCVE-0011-R5b-SM-CKZP7 50-59 years, male 155.1
GTEX-17MF6-0011-R5a-SM-731BA 40-49 years, male 154.6
GTEX-13OW8-0011-R5b-SM-5L3FQ 60-69 years, male 153.2
GTEX-15CHQ-0011-R5b-SM-6AJAN 60-69 years, male 152.9
GTEX-TSE9-0011-R5A-SM-3DB7J 60-69 years, female 152.2
GTEX-1HSKV-0011-R5b-SM-ARZLN 60-69 years, male 151.6
GTEX-1GN1U-0011-R5a-SM-9QEIS 50-59 years, female 150.7
GTEX-14JIY-0011-R5b-SM-62LE7 60-69 years, male 150.0
GTEX-11ONC-0011-R5b-SM-DO93I 60-69 years, male 148.6
GTEX-1IY9M-0011-R5a-SM-A9SLX 60-69 years, male 148.1
GTEX-14E6D-0011-R5b-SM-69LQR 50-59 years, male 147.8
GTEX-WWYW-0011-R5A-SM-3NB3E 50-59 years, female 147.8
GTEX-14JG1-0011-R5a-SM-62LED 40-49 years, male 144.1
GTEX-13OVJ-0011-R5a-SM-5P9H7 50-59 years, female 142.7
GTEX-1HUB1-0011-R5a-SM-CKZOY 60-69 years, male 142.5
GTEX-NPJ7-0011-R5a-SM-33HBK 60-69 years, female 141.8
GTEX-139TT-0011-R5b-SM-5K7W8 60-69 years, male 139.6
GTEX-12ZZZ-0011-R5a-SM-5EQ4M 60-69 years, male 138.1
GTEX-13G51-0011-R5a-SM-5L3EB 60-69 years, male 137.8
GTEX-144GL-0011-R5b-SM-5PNUJ 50-59 years, male 136.8
GTEX-1EKGG-0011-R5a-SM-9OSVQ 60-69 years, male 134.2
GTEX-11GSP-0011-R5a-SM-57WBE 60-69 years, female 134.1
GTEX-ZVT3-0011-R5a-SM-51MSI 60-69 years, female 133.5
GTEX-NPJ8-0011-R5a-SM-2HMJY 40-49 years, male 133.1
GTEX-16Z82-0011-R5a-SM-7EPGB 60-69 years, male 132.0
GTEX-144GO-0011-R5a-SM-5PNUR 60-69 years, male 131.9
GTEX-NL3H-0011-R5a-SM-2I3GB 60-69 years, male 131.1
GTEX-18465-0011-R5a-SM-72D5J 50-59 years, male 129.8
GTEX-11NUK-0011-R5a-SM-DO93N 50-59 years, male 129.7
GTEX-13RTJ-0011-R5a-SM-5P9HR 60-69 years, male 129.3
GTEX-1HR98-0011-R5a-SM-A9G1V 60-69 years, male 129.2
GTEX-183WM-0011-R5a-SM-718A4 70-79 years, female 128.4
GTEX-13NYB-0011-R5a-SM-5MR45 40-49 years, male 128.1
GTEX-1GZ4I-0011-R5a-SM-9OSWQ 50-59 years, male 127.3
GTEX-S7SE-0011-R5A-SM-2XCDA 50-59 years, male 126.5
GTEX-Q2AG-0011-R5A-SM-2HMJH 40-49 years, female 126.2
GTEX-1F48J-0011-R5b-SM-9OSVZ 50-59 years, female 124.1
GTEX-1B933-0011-R5b-SM-7P8SA 50-59 years, female 121.4
GTEX-1F75A-0011-R5a-SM-ARZMJ 50-59 years, male 121.4
GTEX-1H3O1-0011-R5b-SM-ADEH8 60-69 years, male 121.4
GTEX-1R9K4-0011-R5b-SM-EZ6N8 60-69 years, male 121.0
GTEX-13VXU-0011-R5a-SM-5O9D7 50-59 years, male 119.8
GTEX-11UD1-0011-R5b-SM-5P9FP 40-49 years, female 119.2
GTEX-14ASI-0011-R5b-SM-6EU2M 60-69 years, male 117.5
GTEX-1HT8W-0011-R5b-SM-CJI3P 30-39 years, male 117.3
GTEX-12ZZY-0011-R5a-SM-5EGL9 60-69 years, male 116.4
GTEX-17EVQ-0011-R5a-SM-7LT92 70-79 years, male 114.2
GTEX-1F52S-0011-R5a-SM-CJI22 60-69 years, female 113.5
GTEX-N7MS-0011-R5a-SM-2HMK8 60-69 years, male 112.2
GTEX-13FHP-0011-R5b-SM-5LZY2 50-59 years, male 112.0
GTEX-1F6I4-0011-R5b-SM-9QEHA 60-69 years, male 110.2
GTEX-1HR9M-0011-R5a-SM-ARU72 60-69 years, male 109.7
GTEX-13X6K-0011-R5b-SM-5PNUE 60-69 years, female 108.9
GTEX-11NV4-0011-R5a-SM-5NQ88 60-69 years, male 108.7
GTEX-1HFI6-0011-R5a-SM-A9G1J 40-49 years, male 107.6
GTEX-1477Z-0011-R5b-SM-5PNUO 60-69 years, male 107.5
GTEX-ZE9C-0011-R5a-SM-5EGLO 60-69 years, male 107.0
GTEX-RVPV-0011-R5A-SM-2TF69 60-69 years, male 106.6
GTEX-11DYG-0011-R5a-SM-DO928 60-69 years, male 105.4
GTEX-1GMRU-0011-R5a-SM-CKZNS 50-59 years, male 105.3
GTEX-1HCU6-0011-R5a-SM-ARU76 60-69 years, female 105.0
GTEX-ZAB4-0011-R5a-SM-4SOKC 40-49 years, male 104.9
GTEX-1C6WA-0011-R5a-SM-9WG5X 60-69 years, male 104.1
GTEX-ZV68-0011-R5a-SM-4YCDW 50-59 years, female 103.9
GTEX-X4XX-0011-R5A-SM-46MWN 60-69 years, male 103.5
GTEX-Z93S-0011-R5b-SM-4RGNI 50-59 years, male 103.0
GTEX-PVOW-0011-R5A-SM-32PL7 40-49 years, male 102.5
GTEX-13112-0011-R5b-SM-5DUV8 50-59 years, male 102.4
GTEX-145MG-0011-R5b-SM-5S2VU 50-59 years, male 101.7
GTEX-13PVQ-0011-R5b-SM-5O9DI 50-59 years, male 101.5
GTEX-1H1CY-0011-R5a-SM-CM2SN 60-69 years, female 101.2
GTEX-13FLV-0011-R5a-SM-5LZWT 50-59 years, male 100.5
GTEX-1I1GV-0011-R5b-SM-CKZPD 60-69 years, male 100.2
GTEX-P44G-0011-R5A-SM-2I3FA 30-39 years, male 100.1
GTEX-RNOR-0011-R5A-SM-2TF4J 50-59 years, female 99.9
GTEX-1I1GQ-0011-R5a-SM-CMKHJ 50-59 years, male 99.6
GTEX-14DAQ-0011-R5b-SM-5YYAK 60-69 years, female 99.4
GTEX-1GF9W-0011-R5a-SM-CKZO4 60-69 years, male 99.4
GTEX-13X6I-0011-R5a-SM-5PNWW 60-69 years, male 99.0
GTEX-1H3NZ-0011-R5a-SM-CM2SP 60-69 years, male 97.4
GTEX-S7PM-0011-R5A-SM-3NM8G 60-69 years, male 97.1
GTEX-12ZZX-0011-R5a-SM-5HL89 40-49 years, female 96.9
GTEX-11DXY-0011-R5b-SM-DNZZL 60-69 years, male 92.8
GTEX-ZF28-0011-R5a-SM-4WWCZ 60-69 years, male 92.4
GTEX-13OW7-0011-R5b-SM-5O9DM 50-59 years, male 91.9
GTEX-11TTK-0011-R5a-SM-DNZZV 60-69 years, female 91.1
GTEX-1F6IF-0011-R5b-SM-CM2RH 60-69 years, male 91.1
GTEX-N7MT-0011-R5a-SM-2I3G6 60-69 years, female 90.1
GTEX-13OVH-0011-R5b-SM-5KM4L 70-79 years, male 89.4
GTEX-ZXG5-0011-R5b-SM-57WBN 60-69 years, male 88.1
GTEX-14BIN-0011-R5b-SM-5SI78 50-59 years, female 86.2
GTEX-14753-0011-R5a-SM-5S2VW 60-69 years, male 85.8
GTEX-1F75W-0011-R5b-SM-9QEGV 60-69 years, male 84.9
GTEX-1HGF4-0011-R5b-SM-CM2ST 60-69 years, male 83.5
GTEX-1IDJH-0011-R5a-SM-CE6SR 70-79 years, male 83.5
GTEX-1H2FU-0011-R5b-SM-CL552 60-69 years, female 83.3
GTEX-WZTO-0011-R5B-SM-3NMC5 40-49 years, male 82.9
GTEX-1CB4H-0011-R5b-SM-9QEGN 60-69 years, female 82.2
GTEX-13JUV-0011-R5a-SM-5LZY5 40-49 years, female 80.9
GTEX-1GTWX-0011-R5b-SM-CKZO6 60-69 years, male 80.7
GTEX-1GN73-0011-R5a-SM-9QEIM 60-69 years, male 79.1
GTEX-12WSF-0011-R5a-SM-5HL8K 70-79 years, male 78.2
GTEX-1B8SF-0011-R5a-SM-79OOO 60-69 years, male 78.0
GTEX-11DZ1-0011-R5a-SM-DO11J 50-59 years, male 77.4
GTEX-ZVZQ-0011-R5b-SM-57WDC 60-69 years, female 77.3
GTEX-1445S-0011-R5a-SM-5PNUS 60-69 years, male 76.8
GTEX-13O3O-0011-R5b-SM-5KM44 60-69 years, female 76.7
GTEX-ZUA1-0011-R5b-SM-51MTG 40-49 years, male 76.1
GTEX-1HBPI-0011-R5a-SM-CKZOW 50-59 years, male 73.5
GTEX-1B996-0011-R5a-SM-7P8PN 60-69 years, male 72.5
GTEX-15DYW-0011-R5a-SM-6M46W 60-69 years, female 72.2
GTEX-14BMV-0011-R5b-SM-62LFT 50-59 years, male 71.8
GTEX-1IKJJ-0011-R5b-SM-CE6SL 60-69 years, male 71.2
GTEX-13FXS-0011-R5b-SM-5LZYE 50-59 years, male 69.5
GTEX-13S7M-0011-R5b-SM-5P9HS 60-69 years, female 69.3
GTEX-1A3MX-0011-R5a-SM-79OM5 60-69 years, male 67.4
GTEX-1JMQJ-0011-R5a-SM-EYYXO 50-59 years, male 67.3
GTEX-1H23P-0011-R5a-SM-CKZOI 60-69 years, male 67.0
GTEX-14ABY-0011-R5b-SM-5SI7B 50-59 years, male 66.9
GTEX-1N2DW-0011-R5a-SM-EYYX3 50-59 years, male 66.2
GTEX-R55E-0011-R5A-SM-2TC5N 20-29 years, male 65.9
GTEX-14LZ3-0011-R5b-SM-5ZZV8 60-69 years, female 65.6
GTEX-14LLW-0011-R5b-SM-5ZZU6 70-79 years, female 65.5
GTEX-NL4W-0011-R5a-SM-2I3GD 50-59 years, male 64.8
GTEX-139T8-0011-R5b-SM-5J1MO 60-69 years, male 64.1
GTEX-1GZ2Q-0011-R5a-SM-A96RQ 40-49 years, male 63.1
GTEX-1GMR8-0011-R5b-SM-9QEIH 50-59 years, female 62.8
GTEX-13FLW-0011-R5a-SM-5LZX6 50-59 years, male 62.4
GTEX-1EMGI-0011-R5a-SM-CJI2E 60-69 years, male 61.9
GTEX-13N1W-0011-R5b-SM-5MR5Q 70-79 years, male 60.2
GTEX-12WSC-0011-R5b-SM-5CVNS 50-59 years, male 59.7
GTEX-145MH-0011-R5a-SM-5P9JT 50-59 years, male 59.7
GTEX-PWO3-0011-R5A-SM-2I5EZ 60-69 years, female 58.9
GTEX-12ZZW-0011-R5a-SM-5DUVN 50-59 years, male 58.7
GTEX-RU72-0011-R5A-SM-2TF6U 50-59 years, female 58.5
GTEX-1HB9E-0011-R5b-SM-ARU78 50-59 years, male 58.3
GTEX-15EO6-0011-R5b-SM-7KUDZ 50-59 years, male 58.2
GTEX-1192X-0011-R5a-SM-DNZZA 50-59 years, male 58.1
GTEX-T6MN-0011-R5A-SM-32QPD 50-59 years, male 57.6
GTEX-11PRG-0011-R5b-SM-DNZZS 50-59 years, male 56.2
GTEX-QVJO-0011-R5A-SM-2S1QM 60-69 years, female 55.4
GTEX-OXRN-0011-R5A-SM-2I5EF 50-59 years, male 55.3
GTEX-1LG7Y-0011-R5a-SM-EZ6MU 50-59 years, male 53.6
GTEX-X585-0011-R5A-SM-46MVI 50-59 years, male 53.4
GTEX-15DCD-0011-R5a-SM-CXZKZ 70-79 years, female 53.0
GTEX-18464-0011-R5b-SM-718A6 50-59 years, male 52.4
GTEX-13OVL-0011-R5b-SM-5L3FU 50-59 years, male 51.7
GTEX-1AX9I-0011-R5b-SM-793DI 60-69 years, male 51.4
GTEX-13CZV-0011-R5a-SM-5K7XA 60-69 years, male 50.6
GTEX-1313W-0011-R5b-SM-5L3EP 50-59 years, female 50.4
GTEX-OXRO-0011-R5A-SM-2I5EG 60-69 years, female 50.3
GTEX-WVLH-0011-R5A-SM-3MJFW 50-59 years, male 49.4
GTEX-T5JC-0011-R5A-SM-32PLK 20-29 years, male 48.1
GTEX-13X6J-0011-R5b-SM-5PNWT 50-59 years, male 47.9
GTEX-1B8L1-0011-R5a-SM-7DHN5 60-69 years, male 47.8
GTEX-13O3Q-0011-R5b-SM-5P9H4 50-59 years, male 47.5
GTEX-1F7RK-0011-R5b-SM-9WG5S 20-29 years, female 47.3
GTEX-13FHO-0011-R5b-SM-5LZZ3 60-69 years, male 46.5
GTEX-1H1DG-0011-R5b-SM-CJI33 70-79 years, male 44.9
GTEX-11H98-0011-R5b-SM-57WCF 50-59 years, male 44.5
GTEX-13SLX-0011-R5a-SM-5O9BV 50-59 years, female 44.2
GTEX-14C39-0011-R5b-SM-5ZZV1 40-49 years, male 43.8
GTEX-12WSM-0011-R5a-SM-5EQ4Y 60-69 years, male 42.9
GTEX-13OW5-0011-R5b-SM-5L3FR 60-69 years, male 42.4
GTEX-P44H-0011-R5A-SM-2XCEX 40-49 years, male 40.0
GTEX-13CIG-0011-R5b-SM-5L3F2 50-59 years, male 37.7
GTEX-13NYS-0011-R5a-SM-5MR4D 60-69 years, male 37.4
GTEX-1H1ZS-0011-R5b-SM-CL53L 70-79 years, male 37.3
GTEX-14BIM-0011-R5b-SM-5S2RM 60-69 years, female 36.3
GTEX-X261-0011-R5A-SM-3NMB4 50-59 years, male 34.5
GTEX-131YS-0011-R5b-SM-5K7YB 60-69 years, female 32.6
GTEX-UTHO-0011-R5A-SM-3GIJD 60-69 years, male 32.5
GTEX-1J8Q2-0011-R5b-SM-A9SKH 60-69 years, male 32.2
GTEX-15ER7-0011-R5b-SM-6M46T 20-29 years, female 31.4
GTEX-14PN4-0011-R5a-SM-686ZV 50-59 years, male 20.6
GTEX-1J1OQ-0011-R5a-SM-D3L8K 40-49 years, female 14.4
GTEX-T2IS-0011-R5A-SM-32QP4 20-29 years, female 12.8
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CAUDATE - FANTOM5 CAGEi

RNA expression in human tissues obtained through Cap Analysis of Gene Expression (CAGE) generated by the FANTOM5 project are reported as Scaled Tags Per Million.

Read more
Max Scaled Tags Per Million 44.6
FANTOM5 sample id Sample description Scaled Tags Per Million
Caudate nucleus
Scaled Tags Per Million: 44.6
FF:10164-103B2 76 years, female 44.6

CAUDATE - Pig RNA-seqi

RNA-seq data obtained from pig brain is reported as nTPM .

Normal distribution across the dataset is visualized with box plots, shown as median and 25th and 75th percentiles. Points are displayed as outliers if they are above or below 1.5 times the interquartile range. nTPM values of the individual samples are presented next to the box plot.
Read more
Average nTPM 10.7
Pig sample Sample description nTPM
Caudate
nTPM: 10.7
Samples: 4

Max nTPM: 12.6
Min nTPM: 8.1
Sample A Female 12.6
Sample B Female 11.4
Sample C Male 10.5
Sample D Male 8.1

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